RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 ZNF831Q5JPB2 1677 aa8.5□□□□□ -1.05
USP46-202ENST00000451218 KCNQ3O43525 872 aa8.5□□□□□ -1.05
USP46-202ENST00000451218 KCNH5Q8NCM2 988 aa8.5□□□□□ -1.05
USP46-202ENST00000451218 MS4A1P11836 297 aa8.5□□□□□ -1.05
USP46-202ENST00000451218 INTS3Q68E01 1043 aaKnown RBP8.5□□□□□ -1.05
USP46-202ENST00000451218 SMC5Q8IY18 1101 aa8.5□□□□□ -1.05
USP46-202ENST00000451218 SMC4Q9NTJ3 1288 aa8.5□□□□□ -1.05
USP46-202ENST00000451218 PSME1Q06323 249 aa8.49□□□□□ -1.05
USP46-202ENST00000451218 SEC24BO95487 1268 aa8.49□□□□□ -1.05
USP46-202ENST00000451218 KIF16BQ96L93 1317 aa8.49□□□□□ -1.05
USP46-202ENST00000451218 FRAT1Q92837 279 aaPredicted RBP8.49□□□□□ -1.05
USP46-202ENST00000451218 SLIT2O94813 1529 aa8.49□□□□□ -1.05
USP46-202ENST00000451218 CABLES1Q8TDN4 633 aa8.49□□□□□ -1.05
USP46-202ENST00000451218 ANKRD24Q8TF21 1146 aa8.49□□□□□ -1.05
USP46-202ENST00000451218 SLC4A2P04920 1241 aa8.48□□□□□ -1.05
USP46-202ENST00000451218 AMPHP49418 695 aa8.48□□□□□ -1.05
USP46-202ENST00000451218 A0A1B0GUL6 1792 aa8.48□□□□□ -1.05
USP46-202ENST00000451218 TCERG1O14776 1098 aaKnown RBP8.48□□□□□ -1.05
USP46-202ENST00000451218 AAMPQ13685 434 aa8.48□□□□□ -1.05
USP46-202ENST00000451218 ADCY9O60503 1353 aa8.48□□□□□ -1.05
USP46-202ENST00000451218 GNAT3A8MTJ3 354 aa8.48□□□□□ -1.05
USP46-202ENST00000451218 PAK3O75914 559 aaPredicted RBP8.48□□□□□ -1.05
USP46-202ENST00000451218 PDIA6Q15084 440 aa8.48□□□□□ -1.05
USP46-202ENST00000451218 SAMD1Q6SPF0 538 aaPredicted RBP8.48□□□□□ -1.05
USP46-202ENST00000451218 BABAM1Q9NWV8 329 aa8.48□□□□□ -1.05
USP46-202ENST00000451218 EIF4A1P60842 406 aaKnown RBP8.47□□□□□ -1.05
USP46-202ENST00000451218 IBTKQ9P2D0 1353 aaPredicted RBP8.47□□□□□ -1.05
USP46-202ENST00000451218 LMOD3Q0VAK6 560 aa8.47□□□□□ -1.05
USP46-202ENST00000451218 FBXO3Q9UK99 471 aa8.47□□□□□ -1.05
USP46-202ENST00000451218 THSD7AQ9UPZ6 1657 aa8.47□□□□□ -1.05
USP46-202ENST00000451218 PRAMEF22A3QJZ6 481 aa8.47□□□□□ -1.05
USP46-202ENST00000451218 CADPS2Q86UW7 1296 aa8.47□□□□□ -1.05
USP46-202ENST00000451218 NPHP3Q7Z494 1330 aa8.47□□□□□ -1.05
USP46-202ENST00000451218 SALL3Q9BXA9 1300 aa8.47□□□□□ -1.05
USP46-202ENST00000451218 BCORQ6W2J9 1755 aa8.46□□□□□ -1.05
USP46-202ENST00000451218 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.46□□□□□ -1.05
USP46-202ENST00000451218 GAS2L2Q8NHY3 880 aa8.46□□□□□ -1.05
USP46-202ENST00000451218 SBF2Q86WG5 1849 aa8.46□□□□□ -1.05
USP46-202ENST00000451218 AK9Q5TCS8 1911 aa8.46□□□□□ -1.05
USP46-202ENST00000451218 ELL2O00472 640 aaPredicted RBP8.46□□□□□ -1.06
USP46-202ENST00000451218 CYP27B1O15528 508 aa8.46□□□□□ -1.06
USP46-202ENST00000451218 SLAIN2Q9P270 581 aa8.46□□□□□ -1.06
USP46-202ENST00000451218 AKAP4Q5JQC9 854 aa8.45□□□□□ -1.06
USP46-202ENST00000451218 RNMTO43148 476 aaKnown RBP8.45□□□□□ -1.06
USP46-202ENST00000451218 PDZRN3Q9UPQ7 1066 aa8.45□□□□□ -1.06
USP46-202ENST00000451218 NUCB1Q02818 461 aa8.44□□□□□ -1.06
USP46-202ENST00000451218 LAMB2P55268 1798 aa8.44□□□□□ -1.06
USP46-202ENST00000451218 CALD1Q05682 793 aaKnown RBP8.44□□□□□ -1.06
USP46-202ENST00000451218 PTPRCP08575 1304 aa8.44□□□□□ -1.06
USP46-202ENST00000451218 COL4A1P02462 1669 aa8.44□□□□□ -1.06
USP46-202ENST00000451218 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.44□□□□□ -1.06
USP46-202ENST00000451218 LAS1LQ9Y4W2 734 aaKnown RBP8.44□□□□□ -1.06
USP46-202ENST00000451218 MYH14Q7Z406 1995 aaKnown RBP8.44□□□□□ -1.06
USP46-202ENST00000451218 LTV1Q96GA3 475 aaPredicted RBP8.44□□□□□ -1.06
USP46-202ENST00000451218 DDX19BQ9UMR2 479 aa8.44□□□□□ -1.06
USP46-202ENST00000451218 SOS1Q07889 1333 aaPredicted RBP8.43□□□□□ -1.06
USP46-202ENST00000451218 PHKG2P15735 406 aa8.43□□□□□ -1.06
USP46-202ENST00000451218 DDX60Q8IY21 1712 aaKnown RBP8.43□□□□□ -1.06
USP46-202ENST00000451218 PROSER3Q2NL68 480 aa8.43□□□□□ -1.06
USP46-202ENST00000451218 C1orf115Q9H7X2 142 aa8.43□□□□□ -1.06
USP46-202ENST00000451218 NUP98P52948 1817 aa8.43□□□□□ -1.06
USP46-202ENST00000451218 ZC3H6P61129 1189 aaKnown RBP8.43□□□□□ -1.06
USP46-202ENST00000451218 WDR17Q8IZU2 1322 aa8.43□□□□□ -1.06
USP46-202ENST00000451218 CAPN15O75808 1086 aa8.42□□□□□ -1.06
USP46-202ENST00000451218 ATF3P18847 181 aa8.42□□□□□ -1.06
USP46-202ENST00000451218 TAF7Q15545 349 aaPredicted RBP8.42□□□□□ -1.06
USP46-202ENST00000451218 TAF1LQ8IZX4 1826 aa8.42□□□□□ -1.06
USP46-202ENST00000451218 MEIS3Q99687 375 aa8.42□□□□□ -1.06
USP46-202ENST00000451218 PHAXQ9H814 394 aaKnown RBP8.42□□□□□ -1.06
USP46-202ENST00000451218 CHRNA2Q15822 529 aa8.42□□□□□ -1.06
USP46-202ENST00000451218 CEP85Q6P2H3 762 aa8.42□□□□□ -1.06
USP46-202ENST00000451218 PLCD3Q8N3E9 789 aa8.42□□□□□ -1.06
USP46-202ENST00000451218 LY75O60449 1722 aa8.42□□□□□ -1.06
USP46-202ENST00000451218 NKX1-1Q15270 411 aaPredicted RBP8.41□□□□□ -1.06
USP46-202ENST00000451218 MPRIPQ6WCQ1 1025 aa8.41□□□□□ -1.06
USP46-202ENST00000451218 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.41□□□□□ -1.06
USP46-202ENST00000451218 TSPYL4Q9UJ04 414 aa8.41□□□□□ -1.06
USP46-202ENST00000451218 GIGYF1O75420 1035 aaPredicted RBP8.41□□□□□ -1.06
USP46-202ENST00000451218 ITPRIPQ8IWB1 547 aa8.41□□□□□ -1.06
USP46-202ENST00000451218 LRP5O75197 1615 aa8.41□□□□□ -1.06
USP46-202ENST00000451218 MYH3P11055 1940 aa8.41□□□□□ -1.06
USP46-202ENST00000451218 F6X3S4 739 aa8.41□□□□□ -1.06
USP46-202ENST00000451218 KAZALD1Q96I82 304 aa8.41□□□□□ -1.06
USP46-202ENST00000451218 HOXB7P09629 217 aa8.4□□□□□ -1.06
USP46-202ENST00000451218 ARAP2Q8WZ64 1704 aa8.4□□□□□ -1.06
USP46-202ENST00000451218 GSPT1P15170 499 aaKnown RBP8.4□□□□□ -1.06
USP46-202ENST00000451218 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.4□□□□□ -1.06
USP46-202ENST00000451218 ATXN8OSP0DMR3 200 aa8.4□□□□□ -1.07
USP46-202ENST00000451218 ANKRD44Q8N8A2 993 aa8.39□□□□□ -1.07
USP46-202ENST00000451218 UTYO14607 1347 aa8.39□□□□□ -1.07
USP46-202ENST00000451218 SPDYE4A6NLX3 237 aa8.39□□□□□ -1.07
USP46-202ENST00000451218 FLIIQ13045 1269 aa8.39□□□□□ -1.07
USP46-202ENST00000451218 KIF2CQ99661 725 aa8.39□□□□□ -1.07
USP46-202ENST00000451218 USP44Q9H0E7 712 aa8.39□□□□□ -1.07
USP46-202ENST00000451218 DCTPP1Q9H773 170 aa8.39□□□□□ -1.07
USP46-202ENST00000451218 NHSQ6T4R5 1651 aa8.39□□□□□ -1.07
USP46-202ENST00000451218 AMOTQ4VCS5 1084 aa8.39□□□□□ -1.07
USP46-202ENST00000451218 BEND3Q5T5X7 828 aa8.39□□□□□ -1.07
USP46-202ENST00000451218 SLC52A2Q9HAB3 445 aa8.39□□□□□ -1.07
USP46-202ENST00000451218 FAM161AQ3B820 660 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms