RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 SSFA2P28290 1259 aa21.62■■□□□ 1.05
SGCE-208ENST00000450385 ATP6V1AP38606 617 aa21.61■■□□□ 1.05
SGCE-208ENST00000450385 UBR3Q6ZT12 1888 aa21.6■■□□□ 1.05
SGCE-208ENST00000450385 MSH5O43196 834 aa21.6■■□□□ 1.05
SGCE-208ENST00000450385 RC3H1Q5TC82 1133 aaKnown RBP21.6■■□□□ 1.05
SGCE-208ENST00000450385 SCN11AQ9UI33 1791 aa21.6■■□□□ 1.05
SGCE-208ENST00000450385 CFAP53Q96M91 514 aa21.59■■□□□ 1.05
SGCE-208ENST00000450385 KDM6AO15550 1401 aaPredicted RBP21.58■■□□□ 1.05
SGCE-208ENST00000450385 UTRNP46939 3433 aa21.58■■□□□ 1.05
SGCE-208ENST00000450385 NFATC2IPQ8NCF5 419 aa21.56■■□□□ 1.04
SGCE-208ENST00000450385 LINC00116Q8NCU8 138 aa21.56■■□□□ 1.04
SGCE-208ENST00000450385 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.55■■□□□ 1.04
SGCE-208ENST00000450385 ADRA2BP18089 450 aa21.55■■□□□ 1.04
SGCE-208ENST00000450385 NUDCQ9Y266 331 aa21.55■■□□□ 1.04
SGCE-208ENST00000450385 HMOX1P09601 288 aa21.54■■□□□ 1.04
SGCE-208ENST00000450385 ITPK1Q13572 414 aa21.54■■□□□ 1.04
SGCE-208ENST00000450385 COL3A1P02461 1466 aaPredicted RBP21.53■■□□□ 1.04
SGCE-208ENST00000450385 RBM42Q9BTD8 480 aaKnown RBP21.53■■□□□ 1.04
SGCE-208ENST00000450385 SLC52A2Q9HAB3 445 aa21.53■■□□□ 1.04
SGCE-208ENST00000450385 CNTNAP4Q9C0A0 1308 aa21.53■■□□□ 1.04
SGCE-208ENST00000450385 VIRMAQ69YN4 1812 aaKnown RBP21.52■■□□□ 1.04
SGCE-208ENST00000450385 GAS2L2Q8NHY3 880 aa21.52■■□□□ 1.04
SGCE-208ENST00000450385 RTCBQ9Y3I0 505 aaKnown RBP21.52■■□□□ 1.04
SGCE-208ENST00000450385 CD2APQ9Y5K6 639 aa21.52■■□□□ 1.04
SGCE-208ENST00000450385 CHD4Q14839 1912 aa21.52■■□□□ 1.04
SGCE-208ENST00000450385 GNPATO15228 680 aa21.51■■□□□ 1.03
SGCE-208ENST00000450385 MTHFSDQ2M296 383 aaKnown RBP21.51■■□□□ 1.03
SGCE-208ENST00000450385 TRAPPC3LQ5T215 181 aa21.51■■□□□ 1.03
SGCE-208ENST00000450385 CICQ96RK0 1608 aaPredicted RBP21.51■■□□□ 1.03
SGCE-208ENST00000450385 ADAMTS7Q9UKP4 1686 aa21.5■■□□□ 1.03
SGCE-208ENST00000450385 COL5A3P25940 1745 aaPredicted RBP21.5■■□□□ 1.03
SGCE-208ENST00000450385 U2SURPO15042 1029 aaKnown RBP21.5■■□□□ 1.03
SGCE-208ENST00000450385 RNMTO43148 476 aaKnown RBP21.5■■□□□ 1.03
SGCE-208ENST00000450385 YY1P25490 414 aa21.5■■□□□ 1.03
SGCE-208ENST00000450385 GOLGB1Q14789 3259 aaKnown RBP21.49■■□□□ 1.03
SGCE-208ENST00000450385 RPS6KA4O75676 772 aa21.49■■□□□ 1.03
SGCE-208ENST00000450385 SLC4A9Q96Q91 983 aa21.49■■□□□ 1.03
SGCE-208ENST00000450385 MRC1P22897 1456 aa21.49■■□□□ 1.03
SGCE-208ENST00000450385 PPP2R1AP30153 589 aa21.48■■□□□ 1.03
SGCE-208ENST00000450385 VSIG10Q8N0Z9 540 aa21.48■■□□□ 1.03
SGCE-208ENST00000450385 NLGN1Q8N2Q7 840 aa21.48■■□□□ 1.03
SGCE-208ENST00000450385 FCHSD2O94868 740 aa21.47■■□□□ 1.03
SGCE-208ENST00000450385 PHF14O94880 888 aa21.47■■□□□ 1.03
SGCE-208ENST00000450385 LGR6Q9HBX8 967 aa21.47■■□□□ 1.03
SGCE-208ENST00000450385 GNAT3A8MTJ3 354 aa21.46■■□□□ 1.03
SGCE-208ENST00000450385 PTCD1O75127 700 aaKnown RBP21.46■■□□□ 1.03
SGCE-208ENST00000450385 MYH14Q7Z406 1995 aaKnown RBP21.45■■□□□ 1.02
SGCE-208ENST00000450385 GPR162Q16538 588 aa21.45■■□□□ 1.02
SGCE-208ENST00000450385 AMIGO3Q86WK7 504 aa21.45■■□□□ 1.02
SGCE-208ENST00000450385 GRIN3BO60391 1043 aa21.44■■□□□ 1.02
SGCE-208ENST00000450385 RFC4P35249 363 aa21.44■■□□□ 1.02
SGCE-208ENST00000450385 CNGB1Q14028 1251 aaPredicted RBP21.44■■□□□ 1.02
SGCE-208ENST00000450385 MSL1Q68DK7 614 aa21.44■■□□□ 1.02
SGCE-208ENST00000450385 CRKLP46109 303 aaKnown RBP21.42■■□□□ 1.02
SGCE-208ENST00000450385 KLHL34Q8N239 644 aa21.42■■□□□ 1.02
SGCE-208ENST00000450385 ARHGEF1Q92888 912 aaKnown RBP21.42■■□□□ 1.02
SGCE-208ENST00000450385 RSPH6AQ9H0K4 717 aa21.42■■□□□ 1.02
SGCE-208ENST00000450385 TEFQ10587 303 aa21.41■■□□□ 1.02
SGCE-208ENST00000450385 TEX13AQ9BXU3 409 aaPredicted RBP21.41■■□□□ 1.02
SGCE-208ENST00000450385 HTATSF1O43719 755 aaKnown RBP21.4■■□□□ 1.02
SGCE-208ENST00000450385 TJP1Q07157 1748 aa21.39■■□□□ 1.01
SGCE-208ENST00000450385 U2AF1L5P0DN76 240 aaPredicted RBP21.39■■□□□ 1.01
SGCE-208ENST00000450385 PRKAR2BP31323 418 aa21.39■■□□□ 1.01
SGCE-208ENST00000450385 U2AF1Q01081 240 aaKnown RBP eCLIP21.39■■□□□ 1.01
SGCE-208ENST00000450385 TTC5Q8N0Z6 440 aa21.39■■□□□ 1.01
SGCE-208ENST00000450385 PNNQ9H307 717 aaKnown RBP21.39■■□□□ 1.01
SGCE-208ENST00000450385 CEMIPQ8WUJ3 1361 aa21.38■■□□□ 1.01
SGCE-208ENST00000450385 IL17REQ8NFR9 667 aa21.38■■□□□ 1.01
SGCE-208ENST00000450385 NLGN2Q8NFZ4 835 aa21.38■■□□□ 1.01
SGCE-208ENST00000450385 UBR2Q8IWV8 1755 aa21.38■■□□□ 1.01
SGCE-208ENST00000450385 STARD3NLO95772 234 aa21.37■■□□□ 1.01
SGCE-208ENST00000450385 NEFMP07197 916 aa21.37■■□□□ 1.01
SGCE-208ENST00000450385 RALBP1Q15311 655 aa21.37■■□□□ 1.01
SGCE-208ENST00000450385 INTS5Q6P9B9 1019 aaKnown RBP21.37■■□□□ 1.01
SGCE-208ENST00000450385 CCDC87Q9NVE4 849 aa21.37■■□□□ 1.01
SGCE-208ENST00000450385 SIPA1L3O60292 1781 aaPredicted RBP21.36■■□□□ 1.01
SGCE-208ENST00000450385 MMP10P09238 476 aa21.36■■□□□ 1.01
SGCE-208ENST00000450385 CYP19A1P11511 503 aaPredicted RBP21.36■■□□□ 1.01
SGCE-208ENST00000450385 GYS1P13807 737 aa21.36■■□□□ 1.01
SGCE-208ENST00000450385 TGFB2P61812 414 aa21.36■■□□□ 1.01
SGCE-208ENST00000450385 ZNF790Q6PG37 636 aa21.36■■□□□ 1.01
SGCE-208ENST00000450385 RTF1Q92541 710 aaKnown RBP21.36■■□□□ 1.01
SGCE-208ENST00000450385 PHACTR3Q96KR7 559 aa21.36■■□□□ 1.01
SGCE-208ENST00000450385 KIF13BQ9NQT8 1826 aa21.36■■□□□ 1.01
SGCE-208ENST00000450385 KCPQ6ZWJ8 1503 aa21.35■■□□□ 1.01
SGCE-208ENST00000450385 SLC39A6Q13433 755 aa21.35■■□□□ 1.01
SGCE-208ENST00000450385 SMIM5Q71RC9 77 aa21.35■■□□□ 1.01
SGCE-208ENST00000450385 DNAJC10Q8IXB1 793 aa21.34■■□□□ 1.01
SGCE-208ENST00000450385 PARP3Q9Y6F1 533 aa21.34■■□□□ 1.01
SGCE-208ENST00000450385 C4AP0C0L4 1744 aa21.34■■□□□ 1.01
SGCE-208ENST00000450385 USP42Q9H9J4 1324 aaKnown RBP21.33■■□□□ 1.01
SGCE-208ENST00000450385 ZPR1O75312 459 aa21.33■■□□□ 1.01
SGCE-208ENST00000450385 FMNL2Q96PY5 1086 aa21.32■■□□□ 1
SGCE-208ENST00000450385 SOS1Q07889 1333 aaPredicted RBP21.31■■□□□ 1
SGCE-208ENST00000450385 A0A087WZG4 1122 aa21.3■■□□□ 1
SGCE-208ENST00000450385 BTBD11A6QL63 1104 aa21.3■■□□□ 1
SGCE-208ENST00000450385 PELP1Q8IZL8 1130 aaKnown RBP21.3■■□□□ 1
SGCE-208ENST00000450385 NARFQ9UHQ1 456 aa21.3■■□□□ 1
SGCE-208ENST00000450385 HEG1Q9ULI3 1381 aa21.3■■□□□ 1
SGCE-208ENST00000450385 YBX3P16989 372 aaKnown RBP eCLIP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms