RNA–Protein interactions for RNA: ENST00000449844.6

NPAS1-202, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-202ENST00000449844 CHRNA2Q15822 529 aa27.29■■□□□ 1.96
NPAS1-202ENST00000449844 LNPKQ9C0E8 428 aa27.28■■□□□ 1.96
NPAS1-202ENST00000449844 NLRP2Q9NX02 1062 aa27.28■■□□□ 1.96
NPAS1-202ENST00000449844 ABCA3Q99758 1704 aa27.28■■□□□ 1.96
NPAS1-202ENST00000449844 SIRT2Q8IXJ6 389 aa27.28■■□□□ 1.96
NPAS1-202ENST00000449844 CSB-PGBD3P0DP91 1061 aa27.27■■□□□ 1.96
NPAS1-202ENST00000449844 C1orf141Q5JVX7 400 aa27.27■■□□□ 1.96
NPAS1-202ENST00000449844 ANKRD45Q5TZF3 282 aa27.25■■□□□ 1.95
NPAS1-202ENST00000449844 RAPGEF4Q8WZA2 1011 aa27.24■■□□□ 1.95
NPAS1-202ENST00000449844 LGR6Q9HBX8 967 aa27.23■■□□□ 1.95
NPAS1-202ENST00000449844 KDM3BQ7LBC6 1761 aa27.23■■□□□ 1.95
NPAS1-202ENST00000449844 SOS1Q07889 1333 aaPredicted RBP27.22■■□□□ 1.95
NPAS1-202ENST00000449844 SLC4A2P04920 1241 aa27.22■■□□□ 1.95
NPAS1-202ENST00000449844 DEKP35659 375 aaKnown RBP27.22■■□□□ 1.95
NPAS1-202ENST00000449844 BMP2KLQ5H9B9 411 aa27.22■■□□□ 1.95
NPAS1-202ENST00000449844 OVOS2A0A0G2JMS6 1433 aa27.22■■□□□ 1.95
NPAS1-202ENST00000449844 PRDM11Q9NQV5 511 aa27.21■■□□□ 1.95
NPAS1-202ENST00000449844 MPRIPQ6WCQ1 1025 aa27.21■■□□□ 1.95
NPAS1-202ENST00000449844 TEFQ10587 303 aa27.2■■□□□ 1.94
NPAS1-202ENST00000449844 RPAP2Q8IXW5 612 aaPredicted RBP27.2■■□□□ 1.94
NPAS1-202ENST00000449844 RNMTO43148 476 aaKnown RBP27.19■■□□□ 1.94
NPAS1-202ENST00000449844 TATP17735 454 aaPredicted RBP27.19■■□□□ 1.94
NPAS1-202ENST00000449844 ANKRD44Q8N8A2 993 aa27.19■■□□□ 1.94
NPAS1-202ENST00000449844 C22orf23Q9BZE7 217 aa27.19■■□□□ 1.94
NPAS1-202ENST00000449844 ATP10DQ9P241 1426 aa27.18■■□□□ 1.94
NPAS1-202ENST00000449844 DCTPP1Q9H773 170 aa27.18■■□□□ 1.94
NPAS1-202ENST00000449844 MEGF6O75095 1541 aa27.18■■□□□ 1.94
NPAS1-202ENST00000449844 MFAP1P55081 439 aaKnown RBP27.17■■□□□ 1.94
NPAS1-202ENST00000449844 CACNA1FO60840 1977 aa27.17■■□□□ 1.94
NPAS1-202ENST00000449844 STK31Q9BXU1 1019 aa27.17■■□□□ 1.94
NPAS1-202ENST00000449844 ADAMTS7Q9UKP4 1686 aa27.17■■□□□ 1.94
NPAS1-202ENST00000449844 NFKBIBQ15653 356 aa27.16■■□□□ 1.94
NPAS1-202ENST00000449844 ROBO1Q9Y6N7 1651 aa27.16■■□□□ 1.94
NPAS1-202ENST00000449844 PLEKHG2Q9H7P9 1386 aa27.15■■□□□ 1.94
NPAS1-202ENST00000449844 SIPA1L3O60292 1781 aaPredicted RBP27.15■■□□□ 1.94
NPAS1-202ENST00000449844 CCDC30Q5VVM6 783 aa27.15■■□□□ 1.94
NPAS1-202ENST00000449844 LTBP4Q8N2S1 1624 aa27.15■■□□□ 1.94
NPAS1-202ENST00000449844 CCT4P50991 539 aaKnown RBP27.14■■□□□ 1.94
NPAS1-202ENST00000449844 SPG7Q9UQ90 795 aa27.14■■□□□ 1.94
NPAS1-202ENST00000449844 CEP85Q6P2H3 762 aa27.14■■□□□ 1.93
NPAS1-202ENST00000449844 PKD1L3Q7Z443 1732 aa27.14■■□□□ 1.93
NPAS1-202ENST00000449844 BTBD11A6QL63 1104 aa27.13■■□□□ 1.93
NPAS1-202ENST00000449844 SCN11AQ9UI33 1791 aa27.13■■□□□ 1.93
NPAS1-202ENST00000449844 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.12■■□□□ 1.93
NPAS1-202ENST00000449844 G2E3Q7L622 706 aa27.12■■□□□ 1.93
NPAS1-202ENST00000449844 COL5A2P05997 1499 aaPredicted RBP27.11■■□□□ 1.93
NPAS1-202ENST00000449844 WDR17Q8IZU2 1322 aa27.11■■□□□ 1.93
NPAS1-202ENST00000449844 EIF4A1P60842 406 aaKnown RBP27.11■■□□□ 1.93
NPAS1-202ENST00000449844 MEIS3Q99687 375 aa27.11■■□□□ 1.93
NPAS1-202ENST00000449844 TBC1D2Q9BYX2 928 aa27.11■■□□□ 1.93
NPAS1-202ENST00000449844 PARP4Q9UKK3 1724 aaKnown RBP27.1■■□□□ 1.93
NPAS1-202ENST00000449844 NECTIN2Q92692 538 aa27.09■■□□□ 1.93
NPAS1-202ENST00000449844 AHDC1Q5TGY3 1603 aaPredicted RBP27.09■■□□□ 1.93
NPAS1-202ENST00000449844 PHKG2P15735 406 aa27.08■■□□□ 1.93
NPAS1-202ENST00000449844 RBM25P49756 843 aaKnown RBP27.08■■□□□ 1.93
NPAS1-202ENST00000449844 HDGFL1Q5TGJ6 251 aa27.08■■□□□ 1.93
NPAS1-202ENST00000449844 TOM1L2Q6ZVM7 507 aa27.08■■□□□ 1.93
NPAS1-202ENST00000449844 KCNQ3O43525 872 aa27.07■■□□□ 1.92
NPAS1-202ENST00000449844 HOXB7P09629 217 aa27.07■■□□□ 1.92
NPAS1-202ENST00000449844 IFNL2Q8IZJ0 200 aa27.07■■□□□ 1.92
NPAS1-202ENST00000449844 HMMRO75330 724 aa27.06■■□□□ 1.92
NPAS1-202ENST00000449844 FLIIQ13045 1269 aa27.06■■□□□ 1.92
NPAS1-202ENST00000449844 KDM6AO15550 1401 aaPredicted RBP27.06■■□□□ 1.92
NPAS1-202ENST00000449844 PLEKHM2Q8IWE5 1019 aa27.06■■□□□ 1.92
NPAS1-202ENST00000449844 EIF5BO60841 1220 aaKnown RBP27.05■■□□□ 1.92
NPAS1-202ENST00000449844 SLC4A10Q6U841 1118 aa27.05■■□□□ 1.92
NPAS1-202ENST00000449844 F6X3S4 739 aa27.04■■□□□ 1.92
NPAS1-202ENST00000449844 CHMP4AQ9BY43 222 aa27.04■■□□□ 1.92
NPAS1-202ENST00000449844 PXDNLA1KZ92 1463 aa27.02■■□□□ 1.92
NPAS1-202ENST00000449844 FKBP5Q13451 457 aaPredicted RBP27.02■■□□□ 1.92
NPAS1-202ENST00000449844 ANTXR1Q9H6X2 564 aa27.02■■□□□ 1.92
NPAS1-202ENST00000449844 CDC45O75419 566 aa27.01■■□□□ 1.91
NPAS1-202ENST00000449844 EIF2S2P20042 333 aaKnown RBP27.01■■□□□ 1.91
NPAS1-202ENST00000449844 TBC1D9Q6ZT07 1266 aa27.01■■□□□ 1.91
NPAS1-202ENST00000449844 COL22A1Q8NFW1 1626 aaPredicted RBP27.01■■□□□ 1.91
NPAS1-202ENST00000449844 SLC52A2Q9HAB3 445 aa27■■□□□ 1.91
NPAS1-202ENST00000449844 STRN4Q9NRL3 753 aa27■■□□□ 1.91
NPAS1-202ENST00000449844 N4BP2Q86UW6 1770 aaPredicted RBP27■■□□□ 1.91
NPAS1-202ENST00000449844 CYP27B1O15528 508 aa27■■□□□ 1.91
NPAS1-202ENST00000449844 GNAI2P04899 355 aa27■■□□□ 1.91
NPAS1-202ENST00000449844 GNAI3P08754 354 aa27■■□□□ 1.91
NPAS1-202ENST00000449844 EVA1CP58658 441 aa27■■□□□ 1.91
NPAS1-202ENST00000449844 TTC22Q5TAA0 569 aa27■■□□□ 1.91
NPAS1-202ENST00000449844 HSP90AB1P08238 724 aaKnown RBP26.99■■□□□ 1.91
NPAS1-202ENST00000449844 CARD10Q9BWT7 1032 aa26.99■■□□□ 1.91
NPAS1-202ENST00000449844 MRC1P22897 1456 aa26.99■■□□□ 1.91
NPAS1-202ENST00000449844 DCAF5Q96JK2 942 aa26.99■■□□□ 1.91
NPAS1-202ENST00000449844 GSPT1P15170 499 aaKnown RBP26.98■■□□□ 1.91
NPAS1-202ENST00000449844 SLKQ9H2G2 1235 aaPredicted RBP26.98■■□□□ 1.91
NPAS1-202ENST00000449844 COL14A1Q05707 1796 aaKnown RBP26.97■■□□□ 1.91
NPAS1-202ENST00000449844 HEG1Q9ULI3 1381 aa26.97■■□□□ 1.91
NPAS1-202ENST00000449844 LARP1Q6PKG0 1096 aaKnown RBP26.97■■□□□ 1.91
NPAS1-202ENST00000449844 FRAT2O75474 233 aaPredicted RBP26.96■■□□□ 1.91
NPAS1-202ENST00000449844 SNX21Q969T3 373 aa26.96■■□□□ 1.91
NPAS1-202ENST00000449844 PCDH11XQ9BZA7 1347 aa26.96■■□□□ 1.91
NPAS1-202ENST00000449844 PCDH11YQ9BZA8 1340 aa26.96■■□□□ 1.91
NPAS1-202ENST00000449844 PHLPP1O60346 1717 aa26.95■■□□□ 1.91
NPAS1-202ENST00000449844 HSCBQ8IWL3 235 aa26.95■■□□□ 1.91
NPAS1-202ENST00000449844 CHPF2Q9P2E5 772 aa26.95■■□□□ 1.91
NPAS1-202ENST00000449844 GIGYF1O75420 1035 aaPredicted RBP26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms