RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 PAPPAQ13219 1627 aa16.56■□□□□ 0.24
HLA-DRB9-201ENST00000449413 CEMIPQ8WUJ3 1361 aa16.55■□□□□ 0.24
HLA-DRB9-201ENST00000449413 DCTN1Q14203 1278 aa16.55■□□□□ 0.24
HLA-DRB9-201ENST00000449413 RTF1Q92541 710 aaKnown RBP16.55■□□□□ 0.24
HLA-DRB9-201ENST00000449413 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.55■□□□□ 0.24
HLA-DRB9-201ENST00000449413 KDM6AO15550 1401 aaPredicted RBP16.54■□□□□ 0.24
HLA-DRB9-201ENST00000449413 DOT1LQ8TEK3 1739 aa16.54■□□□□ 0.24
HLA-DRB9-201ENST00000449413 IL2RBP14784 551 aa16.54■□□□□ 0.24
HLA-DRB9-201ENST00000449413 AKAP4Q5JQC9 854 aa16.54■□□□□ 0.24
HLA-DRB9-201ENST00000449413 C1orf141Q5JVX7 400 aa16.54■□□□□ 0.24
HLA-DRB9-201ENST00000449413 MCM10Q7L590 875 aa16.54■□□□□ 0.24
HLA-DRB9-201ENST00000449413 IFT57Q9NWB7 429 aa16.54■□□□□ 0.24
HLA-DRB9-201ENST00000449413 SPG7Q9UQ90 795 aa16.54■□□□□ 0.24
HLA-DRB9-201ENST00000449413 PCDH11XQ9BZA7 1347 aa16.53■□□□□ 0.24
HLA-DRB9-201ENST00000449413 PCDH11YQ9BZA8 1340 aa16.53■□□□□ 0.24
HLA-DRB9-201ENST00000449413 PLSCR1O15162 318 aa16.53■□□□□ 0.24
HLA-DRB9-201ENST00000449413 THRAP3Q9Y2W1 955 aaKnown RBP16.53■□□□□ 0.24
HLA-DRB9-201ENST00000449413 GNAI1P63096 354 aa16.52■□□□□ 0.24
HLA-DRB9-201ENST00000449413 TSR2Q969E8 191 aaKnown RBP16.52■□□□□ 0.24
HLA-DRB9-201ENST00000449413 ANO8Q9HCE9 1232 aaPredicted RBP16.52■□□□□ 0.24
HLA-DRB9-201ENST00000449413 ZNF853P0CG23 659 aa16.51■□□□□ 0.23
HLA-DRB9-201ENST00000449413 ITGB4P16144 1822 aa16.5■□□□□ 0.23
HLA-DRB9-201ENST00000449413 PHKG2P15735 406 aa16.5■□□□□ 0.23
HLA-DRB9-201ENST00000449413 PTGER2P43116 358 aa16.5■□□□□ 0.23
HLA-DRB9-201ENST00000449413 CFAP44Q96MT7 982 aa16.5■□□□□ 0.23
HLA-DRB9-201ENST00000449413 UBR2Q8IWV8 1755 aa16.5■□□□□ 0.23
HLA-DRB9-201ENST00000449413 RCAN3Q9UKA8 241 aa16.49■□□□□ 0.23
HLA-DRB9-201ENST00000449413 LAS1LQ9Y4W2 734 aaKnown RBP16.49■□□□□ 0.23
HLA-DRB9-201ENST00000449413 LAMB4A4D0S4 1761 aa16.49■□□□□ 0.23
HLA-DRB9-201ENST00000449413 CASZ1Q86V15 1759 aa16.49■□□□□ 0.23
HLA-DRB9-201ENST00000449413 ZBTB7AO95365 584 aa16.48■□□□□ 0.23
HLA-DRB9-201ENST00000449413 IFNL2Q8IZJ0 200 aa16.48■□□□□ 0.23
HLA-DRB9-201ENST00000449413 IL17REQ8NFR9 667 aa16.48■□□□□ 0.23
HLA-DRB9-201ENST00000449413 ZCRB1Q8TBF4 217 aaKnown RBP16.48■□□□□ 0.23
HLA-DRB9-201ENST00000449413 SYT17Q9BSW7 474 aa16.48■□□□□ 0.23
HLA-DRB9-201ENST00000449413 MBIPQ9NS73 344 aa16.48■□□□□ 0.23
HLA-DRB9-201ENST00000449413 C5P01031 1676 aa16.48■□□□□ 0.23
HLA-DRB9-201ENST00000449413 RGPD3A6NKT7 1758 aaPredicted RBP16.48■□□□□ 0.23
HLA-DRB9-201ENST00000449413 RGPD4Q7Z3J3 1758 aa16.48■□□□□ 0.23
HLA-DRB9-201ENST00000449413 CYP27B1O15528 508 aa16.47■□□□□ 0.23
HLA-DRB9-201ENST00000449413 RNMTO43148 476 aaKnown RBP16.47■□□□□ 0.23
HLA-DRB9-201ENST00000449413 PDGFDQ9GZP0 370 aaPredicted RBP16.47■□□□□ 0.23
HLA-DRB9-201ENST00000449413 HSP90AB1P08238 724 aaKnown RBP16.46■□□□□ 0.23
HLA-DRB9-201ENST00000449413 MPRIPQ6WCQ1 1025 aa16.46■□□□□ 0.23
HLA-DRB9-201ENST00000449413 CDCA7Q9BWT1 371 aaPredicted RBP16.46■□□□□ 0.23
HLA-DRB9-201ENST00000449413 FHDC1Q9C0D6 1143 aaPredicted RBP16.46■□□□□ 0.23
HLA-DRB9-201ENST00000449413 BCL11BQ9C0K0 894 aaPredicted RBP16.46■□□□□ 0.23
HLA-DRB9-201ENST00000449413 CHL1O00533 1208 aa16.45■□□□□ 0.22
HLA-DRB9-201ENST00000449413 CT47B1P0C2W7 299 aaPredicted RBP16.45■□□□□ 0.22
HLA-DRB9-201ENST00000449413 EXOSC9Q06265 439 aaKnown RBP16.45■□□□□ 0.22
HLA-DRB9-201ENST00000449413 SUPT16HQ9Y5B9 1047 aaKnown RBP16.45■□□□□ 0.22
HLA-DRB9-201ENST00000449413 RNF123Q5XPI4 1314 aa16.45■□□□□ 0.22
HLA-DRB9-201ENST00000449413 TEFQ10587 303 aa16.44■□□□□ 0.22
HLA-DRB9-201ENST00000449413 DCAF5Q96JK2 942 aa16.44■□□□□ 0.22
HLA-DRB9-201ENST00000449413 LGR6Q9HBX8 967 aa16.44■□□□□ 0.22
HLA-DRB9-201ENST00000449413 TSPYL4Q9UJ04 414 aa16.44■□□□□ 0.22
HLA-DRB9-201ENST00000449413 ATF5Q9Y2D1 282 aaPredicted RBP16.44■□□□□ 0.22
HLA-DRB9-201ENST00000449413 PROM2Q8N271 834 aa16.43■□□□□ 0.22
HLA-DRB9-201ENST00000449413 BABAM1Q9NWV8 329 aa16.43■□□□□ 0.22
HLA-DRB9-201ENST00000449413 RRP1P56182 461 aaKnown RBP16.42■□□□□ 0.22
HLA-DRB9-201ENST00000449413 TAF7Q15545 349 aaPredicted RBP16.42■□□□□ 0.22
HLA-DRB9-201ENST00000449413 GIGYF1O75420 1035 aaPredicted RBP16.41■□□□□ 0.22
HLA-DRB9-201ENST00000449413 SGIP1Q9BQI5 828 aa16.41■□□□□ 0.22
HLA-DRB9-201ENST00000449413 MTFR1LQ9H019 292 aa16.41■□□□□ 0.22
HLA-DRB9-201ENST00000449413 STK32BQ9NY57 414 aa16.41■□□□□ 0.22
HLA-DRB9-201ENST00000449413 GOLGB1Q14789 3259 aaKnown RBP16.41■□□□□ 0.22
HLA-DRB9-201ENST00000449413 NHSQ6T4R5 1651 aa16.4■□□□□ 0.22
HLA-DRB9-201ENST00000449413 BCL9O00512 1426 aa16.4■□□□□ 0.22
HLA-DRB9-201ENST00000449413 NEFLP07196 543 aa16.4■□□□□ 0.22
HLA-DRB9-201ENST00000449413 NKX1-1Q15270 411 aaPredicted RBP16.4■□□□□ 0.22
HLA-DRB9-201ENST00000449413 SLC15A2Q16348 729 aa16.4■□□□□ 0.22
HLA-DRB9-201ENST00000449413 DDB1Q16531 1140 aa16.4■□□□□ 0.22
HLA-DRB9-201ENST00000449413 SLC52A2Q9HAB3 445 aa16.4■□□□□ 0.22
HLA-DRB9-201ENST00000449413 CACNA1FO60840 1977 aa16.4■□□□□ 0.22
HLA-DRB9-201ENST00000449413 CHD4Q14839 1912 aa16.39■□□□□ 0.21
HLA-DRB9-201ENST00000449413 N4BP2Q86UW6 1770 aaPredicted RBP16.39■□□□□ 0.21
HLA-DRB9-201ENST00000449413 DDX54Q8TDD1 881 aaKnown RBP16.39■□□□□ 0.21
HLA-DRB9-201ENST00000449413 MIS18AQ9NYP9 233 aa16.39■□□□□ 0.21
HLA-DRB9-201ENST00000449413 KCPQ6ZWJ8 1503 aa16.39■□□□□ 0.21
HLA-DRB9-201ENST00000449413 RARSP54136 660 aaKnown RBP16.38■□□□□ 0.21
HLA-DRB9-201ENST00000449413 TWISTNBQ3B726 338 aaPredicted RBP16.38■□□□□ 0.21
HLA-DRB9-201ENST00000449413 PTF1AQ7RTS3 328 aa16.38■□□□□ 0.21
HLA-DRB9-201ENST00000449413 CICQ96RK0 1608 aaPredicted RBP16.37■□□□□ 0.21
HLA-DRB9-201ENST00000449413 BTBD11A6QL63 1104 aa16.37■□□□□ 0.21
HLA-DRB9-201ENST00000449413 EXOC5O00471 708 aa16.37■□□□□ 0.21
HLA-DRB9-201ENST00000449413 TXNRD1Q16881 649 aa16.37■□□□□ 0.21
HLA-DRB9-201ENST00000449413 TSPYL6Q8N831 410 aa16.37■□□□□ 0.21
HLA-DRB9-201ENST00000449413 C8orf58Q8NAV2 365 aa16.37■□□□□ 0.21
HLA-DRB9-201ENST00000449413 ZNF428Q96B54 188 aa16.37■□□□□ 0.21
HLA-DRB9-201ENST00000449413 SBF2Q86WG5 1849 aa16.37■□□□□ 0.21
HLA-DRB9-201ENST00000449413 ERVV-2B6SEH9 535 aa16.36■□□□□ 0.21
HLA-DRB9-201ENST00000449413 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
HLA-DRB9-201ENST00000449413 ARXQ96QS3 562 aa16.36■□□□□ 0.21
HLA-DRB9-201ENST00000449413 GTF3C3Q9Y5Q9 886 aa16.36■□□□□ 0.21
HLA-DRB9-201ENST00000449413 CABP4P57796 275 aa16.35■□□□□ 0.21
HLA-DRB9-201ENST00000449413 ALDH1L2Q3SY69 923 aa16.35■□□□□ 0.21
HLA-DRB9-201ENST00000449413 SMC4Q9NTJ3 1288 aa16.35■□□□□ 0.21
HLA-DRB9-201ENST00000449413 SOS1Q07889 1333 aaPredicted RBP16.35■□□□□ 0.21
HLA-DRB9-201ENST00000449413 TJP1Q07157 1748 aa16.34■□□□□ 0.21
HLA-DRB9-201ENST00000449413 VAMP4O75379 141 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms