RNA–Protein interactions for RNA: ENST00000448582.6

FAM60A-202, Transcript of Protein FAM60A, humanhuman

TSL 1 (best)

Gene FAM60A, Length 3,111 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-202ENST00000448582 ROBO1Q9Y6N7 1651 aa6.92□□□□□ -1.3
FAM60A-202ENST00000448582 TGFB3P10600 412 aa6.92□□□□□ -1.3
FAM60A-202ENST00000448582 KCNH8Q96L42 1107 aa6.92□□□□□ -1.3
FAM60A-202ENST00000448582 REPIN1Q9BWE0 567 aaKnown RBP6.92□□□□□ -1.3
FAM60A-202ENST00000448582 COMMD10Q9Y6G5 202 aa6.92□□□□□ -1.3
FAM60A-202ENST00000448582 RTEL1-TNFRSF6BF6WH68 1400 aa6.91□□□□□ -1.3
FAM60A-202ENST00000448582 MTUS2Q5JR59 1369 aa6.91□□□□□ -1.3
FAM60A-202ENST00000448582 YY1P25490 414 aa6.91□□□□□ -1.3
FAM60A-202ENST00000448582 HSPA2P54652 639 aa6.91□□□□□ -1.3
FAM60A-202ENST00000448582 C1QTNF12Q5T7M4 302 aa6.91□□□□□ -1.3
FAM60A-202ENST00000448582 CACTIN-AS1Q8N1I8 211 aa6.91□□□□□ -1.3
FAM60A-202ENST00000448582 RBM42Q9BTD8 480 aaKnown RBP6.91□□□□□ -1.3
FAM60A-202ENST00000448582 ISY1Q9ULR0 285 aaKnown RBP6.91□□□□□ -1.3
FAM60A-202ENST00000448582 TBX22Q9Y458 520 aa6.91□□□□□ -1.3
FAM60A-202ENST00000448582 RREB1Q92766 1687 aa6.91□□□□□ -1.3
FAM60A-202ENST00000448582 DISP1Q96F81 1524 aa6.91□□□□□ -1.3
FAM60A-202ENST00000448582 FAM163BP0C2L3 166 aa6.91□□□□□ -1.3
FAM60A-202ENST00000448582 GTF2F1P35269 517 aaKnown RBP eCLIP6.91□□□□□ -1.3
FAM60A-202ENST00000448582 EHBP1L1Q8N3D4 1523 aa6.9□□□□□ -1.3
FAM60A-202ENST00000448582 TMEM88BA6NKF7 163 aa6.9□□□□□ -1.3
FAM60A-202ENST00000448582 GOLIM4O00461 696 aa6.9□□□□□ -1.3
FAM60A-202ENST00000448582 MFSD4BQ5TF39 518 aa6.9□□□□□ -1.3
FAM60A-202ENST00000448582 TTC39BQ5VTQ0 682 aaPredicted RBP6.9□□□□□ -1.3
FAM60A-202ENST00000448582 IL17RAQ96F46 866 aa6.9□□□□□ -1.3
FAM60A-202ENST00000448582 C8orf37Q96NL8 207 aa6.9□□□□□ -1.3
FAM60A-202ENST00000448582 TANGO6Q9C0B7 1094 aa6.9□□□□□ -1.3
FAM60A-202ENST00000448582 NCOA2Q15596 1464 aa6.9□□□□□ -1.3
FAM60A-202ENST00000448582 TNNI2P48788 182 aa6.9□□□□□ -1.3
FAM60A-202ENST00000448582 PLEKHG6Q3KR16 790 aa6.9□□□□□ -1.3
FAM60A-202ENST00000448582 C10orf62Q5T681 223 aaPredicted RBP6.9□□□□□ -1.3
FAM60A-202ENST00000448582 SDE2Q6IQ49 451 aa6.9□□□□□ -1.3
FAM60A-202ENST00000448582 ZCRB1Q8TBF4 217 aaKnown RBP6.9□□□□□ -1.3
FAM60A-202ENST00000448582 SFMBT1Q9UHJ3 866 aa6.9□□□□□ -1.3
FAM60A-202ENST00000448582 PTPN23Q9H3S7 1636 aa6.9□□□□□ -1.31
FAM60A-202ENST00000448582 HFM1A2PYH4 1435 aa6.9□□□□□ -1.31
FAM60A-202ENST00000448582 MYOM3Q5VTT5 1437 aa6.9□□□□□ -1.31
FAM60A-202ENST00000448582 JDP2Q8WYK2 163 aa6.9□□□□□ -1.31
FAM60A-202ENST00000448582 INO80BQ9C086 356 aaPredicted RBP6.9□□□□□ -1.31
FAM60A-202ENST00000448582 C7P10643 843 aa6.89□□□□□ -1.31
FAM60A-202ENST00000448582 RNF217Q8TC41 542 aa6.89□□□□□ -1.31
FAM60A-202ENST00000448582 SIN3AQ96ST3 1273 aa6.89□□□□□ -1.31
FAM60A-202ENST00000448582 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.89□□□□□ -1.31
FAM60A-202ENST00000448582 PITPNM2Q9BZ72 1349 aa6.89□□□□□ -1.31
FAM60A-202ENST00000448582 CCDC18Q5T9S5 1454 aa6.89□□□□□ -1.31
FAM60A-202ENST00000448582 SCAF11Q99590 1463 aaKnown RBP6.89□□□□□ -1.31
FAM60A-202ENST00000448582 HSP90AA2PQ14568 343 aaPredicted RBP6.89□□□□□ -1.31
FAM60A-202ENST00000448582 CC2D1AQ6P1N0 951 aaPredicted RBP6.89□□□□□ -1.31
FAM60A-202ENST00000448582 PODNQ7Z5L7 613 aa6.89□□□□□ -1.31
FAM60A-202ENST00000448582 SPDYE1Q8NFV5 336 aaPredicted RBP6.89□□□□□ -1.31
FAM60A-202ENST00000448582 MUC3BQ9H195 1237 aa6.89□□□□□ -1.31
FAM60A-202ENST00000448582 ANO2Q9NQ90 1003 aa6.89□□□□□ -1.31
FAM60A-202ENST00000448582 TOMM20Q15388 145 aa6.88□□□□□ -1.31
FAM60A-202ENST00000448582 NBPF9Q3BBW0 867 aa6.88□□□□□ -1.31
FAM60A-202ENST00000448582 NPAS4Q8IUM7 802 aa6.88□□□□□ -1.31
FAM60A-202ENST00000448582 HSCBQ8IWL3 235 aa6.88□□□□□ -1.31
FAM60A-202ENST00000448582 TMA7Q9Y2S6 64 aaKnown RBP6.88□□□□□ -1.31
FAM60A-202ENST00000448582 CFAP70Q5T0N1 1121 aa6.88□□□□□ -1.31
FAM60A-202ENST00000448582 COL24A1Q17RW2 1714 aa6.88□□□□□ -1.31
FAM60A-202ENST00000448582 DIP2CQ9Y2E4 1556 aa6.88□□□□□ -1.31
FAM60A-202ENST00000448582 TBC1D12O60347 775 aa6.87□□□□□ -1.31
FAM60A-202ENST00000448582 FECHP22830 423 aa6.87□□□□□ -1.31
FAM60A-202ENST00000448582 ERCC5P28715 1186 aaPredicted RBP6.87□□□□□ -1.31
FAM60A-202ENST00000448582 SERPINB4P48594 390 aa6.87□□□□□ -1.31
FAM60A-202ENST00000448582 SRPK2P78362 688 aaKnown RBP6.87□□□□□ -1.31
FAM60A-202ENST00000448582 E2F4Q16254 413 aa6.87□□□□□ -1.31
FAM60A-202ENST00000448582 SYCP2LQ5T4T6 812 aa6.87□□□□□ -1.31
FAM60A-202ENST00000448582 MICALL1Q8N3F8 863 aa6.87□□□□□ -1.31
FAM60A-202ENST00000448582 MSL3Q8N5Y2 521 aaKnown RBP6.87□□□□□ -1.31
FAM60A-202ENST00000448582 DDRGK1Q96HY6 314 aa6.87□□□□□ -1.31
FAM60A-202ENST00000448582 TTF2Q9UNY4 1162 aaKnown RBP6.87□□□□□ -1.31
FAM60A-202ENST00000448582 BLMP54132 1417 aaPredicted RBP6.87□□□□□ -1.31
FAM60A-202ENST00000448582 TLDC2A0PJX2 215 aa6.87□□□□□ -1.31
FAM60A-202ENST00000448582 PRSS47A8MTI9 375 aa6.87□□□□□ -1.31
FAM60A-202ENST00000448582 IPO8O15397 1037 aaKnown RBP6.87□□□□□ -1.31
FAM60A-202ENST00000448582 NAT1P18440 290 aa6.87□□□□□ -1.31
FAM60A-202ENST00000448582 ICE2Q659A1 982 aa6.87□□□□□ -1.31
FAM60A-202ENST00000448582 ZSWIM4Q9H7M6 989 aa6.87□□□□□ -1.31
FAM60A-202ENST00000448582 THRAP3Q9Y2W1 955 aaKnown RBP6.87□□□□□ -1.31
FAM60A-202ENST00000448582 COL22A1Q8NFW1 1626 aaPredicted RBP6.87□□□□□ -1.31
FAM60A-202ENST00000448582 SENP3-EIF4A1A0A087X0R7 540 aa6.87□□□□□ -1.31
FAM60A-202ENST00000448582 ERICH4A6NGS2 130 aa6.87□□□□□ -1.31
FAM60A-202ENST00000448582 NAIPQ13075 1403 aa6.87□□□□□ -1.31
FAM60A-202ENST00000448582 CCDC102AQ96A19 550 aa6.87□□□□□ -1.31
FAM60A-202ENST00000448582 PBXIP1Q96AQ6 731 aa6.87□□□□□ -1.31
FAM60A-202ENST00000448582 BACH2Q9BYV9 841 aa6.87□□□□□ -1.31
FAM60A-202ENST00000448582 NOP58Q9Y2X3 529 aaKnown RBP6.87□□□□□ -1.31
FAM60A-202ENST00000448582 COL4A3BPQ9Y5P4 624 aa6.87□□□□□ -1.31
FAM60A-202ENST00000448582 U2AF1L5P0DN76 240 aaPredicted RBP6.86□□□□□ -1.31
FAM60A-202ENST00000448582 NUBP1P53384 320 aa6.86□□□□□ -1.31
FAM60A-202ENST00000448582 U2AF1Q01081 240 aaKnown RBP eCLIP6.86□□□□□ -1.31
FAM60A-202ENST00000448582 CCDC85AQ96PX6 553 aaPredicted RBP6.86□□□□□ -1.31
FAM60A-202ENST00000448582 GCC2Q8IWJ2 1684 aa6.86□□□□□ -1.31
FAM60A-202ENST00000448582 RSPH1Q8WYR4 309 aa6.86□□□□□ -1.31
FAM60A-202ENST00000448582 PAGR1Q9BTK6 254 aa6.86□□□□□ -1.31
FAM60A-202ENST00000448582 MARF1Q9Y4F3 1742 aaKnown RBP6.86□□□□□ -1.31
FAM60A-202ENST00000448582 NKTRP30414 1462 aaKnown RBP6.86□□□□□ -1.31
FAM60A-202ENST00000448582 VGFO15240 615 aaPredicted RBP6.85□□□□□ -1.31
FAM60A-202ENST00000448582 HDAC1Q13547 482 aaPredicted RBP6.85□□□□□ -1.31
FAM60A-202ENST00000448582 LMBRD2Q68DH5 695 aaPredicted RBP6.85□□□□□ -1.31
FAM60A-202ENST00000448582 PHLDB3Q6NSJ2 640 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms