RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 ATP6V1AP38606 617 aa26.63■■□□□ 1.85
VCP-203ENST00000448530 MAP3K5Q99683 1374 aa26.62■■□□□ 1.85
VCP-203ENST00000448530 KDM6AO15550 1401 aaPredicted RBP26.6■■□□□ 1.85
VCP-203ENST00000448530 PHF14O94880 888 aa26.59■■□□□ 1.85
VCP-203ENST00000448530 HMOX1P09601 288 aa26.59■■□□□ 1.85
VCP-203ENST00000448530 YY1P25490 414 aa26.59■■□□□ 1.85
VCP-203ENST00000448530 MSL1Q68DK7 614 aa26.59■■□□□ 1.85
VCP-203ENST00000448530 LINC00116Q8NCU8 138 aa26.59■■□□□ 1.85
VCP-203ENST00000448530 RBM42Q9BTD8 480 aaKnown RBP26.59■■□□□ 1.85
VCP-203ENST00000448530 UBR3Q6ZT12 1888 aa26.59■■□□□ 1.85
VCP-203ENST00000448530 ITPK1Q13572 414 aa26.57■■□□□ 1.84
VCP-203ENST00000448530 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.56■■□□□ 1.84
VCP-203ENST00000448530 SSFA2P28290 1259 aa26.56■■□□□ 1.84
VCP-203ENST00000448530 AKAP4Q5JQC9 854 aa26.56■■□□□ 1.84
VCP-203ENST00000448530 GNPATO15228 680 aa26.55■■□□□ 1.84
VCP-203ENST00000448530 SCN11AQ9UI33 1791 aa26.54■■□□□ 1.84
VCP-203ENST00000448530 NFATC2IPQ8NCF5 419 aa26.54■■□□□ 1.84
VCP-203ENST00000448530 ZNF831Q5JPB2 1677 aa26.54■■□□□ 1.84
VCP-203ENST00000448530 U2SURPO15042 1029 aaKnown RBP26.53■■□□□ 1.84
VCP-203ENST00000448530 CFAP53Q96M91 514 aa26.52■■□□□ 1.84
VCP-203ENST00000448530 GPR162Q16538 588 aa26.51■■□□□ 1.83
VCP-203ENST00000448530 SMIM5Q71RC9 77 aa26.51■■□□□ 1.83
VCP-203ENST00000448530 AMIGO3Q86WK7 504 aa26.51■■□□□ 1.83
VCP-203ENST00000448530 PTCD1O75127 700 aaKnown RBP26.5■■□□□ 1.83
VCP-203ENST00000448530 RTCBQ9Y3I0 505 aaKnown RBP26.49■■□□□ 1.83
VCP-203ENST00000448530 COL3A1P02461 1466 aaPredicted RBP26.49■■□□□ 1.83
VCP-203ENST00000448530 PELP1Q8IZL8 1130 aaKnown RBP26.48■■□□□ 1.83
VCP-203ENST00000448530 SLC4A9Q96Q91 983 aa26.48■■□□□ 1.83
VCP-203ENST00000448530 VIRMAQ69YN4 1812 aaKnown RBP26.47■■□□□ 1.83
VCP-203ENST00000448530 MTHFSDQ2M296 383 aaKnown RBP26.47■■□□□ 1.83
VCP-203ENST00000448530 RC3H1Q5TC82 1133 aaKnown RBP26.47■■□□□ 1.83
VCP-203ENST00000448530 SLC52A2Q9HAB3 445 aa26.47■■□□□ 1.83
VCP-203ENST00000448530 COL5A3P25940 1745 aaPredicted RBP26.47■■□□□ 1.83
VCP-203ENST00000448530 TRAPPC3LQ5T215 181 aa26.46■■□□□ 1.83
VCP-203ENST00000448530 NLGN2Q8NFZ4 835 aa26.46■■□□□ 1.83
VCP-203ENST00000448530 LGR6Q9HBX8 967 aa26.46■■□□□ 1.83
VCP-203ENST00000448530 CNTNAP4Q9C0A0 1308 aa26.45■■□□□ 1.83
VCP-203ENST00000448530 RNMTO43148 476 aaKnown RBP26.45■■□□□ 1.82
VCP-203ENST00000448530 CHD4Q14839 1912 aa26.44■■□□□ 1.82
VCP-203ENST00000448530 CD2APQ9Y5K6 639 aa26.44■■□□□ 1.82
VCP-203ENST00000448530 ADRA2BP18089 450 aa26.43■■□□□ 1.82
VCP-203ENST00000448530 NUDCQ9Y266 331 aa26.43■■□□□ 1.82
VCP-203ENST00000448530 RPS6KA4O75676 772 aa26.41■■□□□ 1.82
VCP-203ENST00000448530 PPP2R1AP30153 589 aa26.41■■□□□ 1.82
VCP-203ENST00000448530 GAS2L2Q8NHY3 880 aa26.41■■□□□ 1.82
VCP-203ENST00000448530 MRC1P22897 1456 aa26.41■■□□□ 1.82
VCP-203ENST00000448530 RFC4P35249 363 aa26.4■■□□□ 1.82
VCP-203ENST00000448530 CRKLP46109 303 aaKnown RBP26.38■■□□□ 1.81
VCP-203ENST00000448530 ARHGEF1Q92888 912 aaKnown RBP26.38■■□□□ 1.81
VCP-203ENST00000448530 TJP1Q07157 1748 aa26.38■■□□□ 1.81
VCP-203ENST00000448530 MYH14Q7Z406 1995 aaKnown RBP26.38■■□□□ 1.81
VCP-203ENST00000448530 ADAMTS7Q9UKP4 1686 aa26.38■■□□□ 1.81
VCP-203ENST00000448530 GNAT3A8MTJ3 354 aa26.37■■□□□ 1.81
VCP-203ENST00000448530 NLGN1Q8N2Q7 840 aa26.37■■□□□ 1.81
VCP-203ENST00000448530 CICQ96RK0 1608 aaPredicted RBP26.36■■□□□ 1.81
VCP-203ENST00000448530 MMP10P09238 476 aa26.36■■□□□ 1.81
VCP-203ENST00000448530 SLC39A6Q13433 755 aa26.36■■□□□ 1.81
VCP-203ENST00000448530 GRIN3BO60391 1043 aa26.35■■□□□ 1.81
VCP-203ENST00000448530 U2AF1L5P0DN76 240 aaPredicted RBP26.35■■□□□ 1.81
VCP-203ENST00000448530 PRKAR2BP31323 418 aa26.35■■□□□ 1.81
VCP-203ENST00000448530 U2AF1Q01081 240 aaKnown RBP eCLIP26.35■■□□□ 1.81
VCP-203ENST00000448530 TEFQ10587 303 aa26.35■■□□□ 1.81
VCP-203ENST00000448530 DNAJC10Q8IXB1 793 aa26.33■■□□□ 1.81
VCP-203ENST00000448530 TTC5Q8N0Z6 440 aa26.33■■□□□ 1.81
VCP-203ENST00000448530 C4AP0C0L4 1744 aa26.32■■□□□ 1.8
VCP-203ENST00000448530 RSPH6AQ9H0K4 717 aa26.32■■□□□ 1.8
VCP-203ENST00000448530 CCDC87Q9NVE4 849 aa26.32■■□□□ 1.8
VCP-203ENST00000448530 GYS1P13807 737 aa26.31■■□□□ 1.8
VCP-203ENST00000448530 KCPQ6ZWJ8 1503 aa26.3■■□□□ 1.8
VCP-203ENST00000448530 UTRNP46939 3433 aa26.3■■□□□ 1.8
VCP-203ENST00000448530 YBX3P16989 372 aaKnown RBP eCLIP26.3■■□□□ 1.8
VCP-203ENST00000448530 INTS5Q6P9B9 1019 aaKnown RBP26.29■■□□□ 1.8
VCP-203ENST00000448530 VSIG10Q8N0Z9 540 aa26.29■■□□□ 1.8
VCP-203ENST00000448530 IL17REQ8NFR9 667 aa26.29■■□□□ 1.8
VCP-203ENST00000448530 PHACTR3Q96KR7 559 aa26.29■■□□□ 1.8
VCP-203ENST00000448530 FCHSD2O94868 740 aa26.28■■□□□ 1.8
VCP-203ENST00000448530 CYP19A1P11511 503 aaPredicted RBP26.28■■□□□ 1.8
VCP-203ENST00000448530 PARP3Q9Y6F1 533 aa26.28■■□□□ 1.8
VCP-203ENST00000448530 ZNF784Q8NCA9 323 aaPredicted RBP26.27■■□□□ 1.8
VCP-203ENST00000448530 UBR2Q8IWV8 1755 aa26.27■■□□□ 1.8
VCP-203ENST00000448530 USP42Q9H9J4 1324 aaKnown RBP26.26■■□□□ 1.79
VCP-203ENST00000448530 GOLGB1Q14789 3259 aaKnown RBP26.25■■□□□ 1.79
VCP-203ENST00000448530 ZPR1O75312 459 aa26.25■■□□□ 1.79
VCP-203ENST00000448530 RTF1Q92541 710 aaKnown RBP26.25■■□□□ 1.79
VCP-203ENST00000448530 SRP68Q9UHB9 627 aaKnown RBP26.25■■□□□ 1.79
VCP-203ENST00000448530 SIPA1L3O60292 1781 aaPredicted RBP26.25■■□□□ 1.79
VCP-203ENST00000448530 STARD3NLO95772 234 aa26.24■■□□□ 1.79
VCP-203ENST00000448530 NEFMP07197 916 aa26.24■■□□□ 1.79
VCP-203ENST00000448530 ZNF790Q6PG37 636 aa26.24■■□□□ 1.79
VCP-203ENST00000448530 SOS1Q07889 1333 aaPredicted RBP26.23■■□□□ 1.79
VCP-203ENST00000448530 WWC3Q9ULE0 1092 aa26.23■■□□□ 1.79
VCP-203ENST00000448530 CEMIPQ8WUJ3 1361 aa26.22■■□□□ 1.79
VCP-203ENST00000448530 KIF13BQ9NQT8 1826 aa26.22■■□□□ 1.79
VCP-203ENST00000448530 TGFB2P61812 414 aa26.21■■□□□ 1.79
VCP-203ENST00000448530 FKBP8Q14318 412 aa26.21■■□□□ 1.79
VCP-203ENST00000448530 ZNF496Q96IT1 587 aaPredicted RBP26.21■■□□□ 1.79
VCP-203ENST00000448530 TEX13AQ9BXU3 409 aaPredicted RBP26.21■■□□□ 1.79
VCP-203ENST00000448530 ZBTB1Q9Y2K1 713 aa26.21■■□□□ 1.79
VCP-203ENST00000448530 BTBD11A6QL63 1104 aa26.2■■□□□ 1.78
VCP-203ENST00000448530 FMNL2Q96PY5 1086 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms