RNA–Protein interactions for RNA: ENST00000448087.5

GTF3C3-205, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 1,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-205ENST00000448087 TTLL8A6PVC2 850 aa8.65□□□□□ -1.03
GTF3C3-205ENST00000448087 FOXD4L5Q5VV16 416 aaPredicted RBP8.65□□□□□ -1.03
GTF3C3-205ENST00000448087 SENP2Q9HC62 589 aa8.65□□□□□ -1.03
GTF3C3-205ENST00000448087 ZNF358Q9NW07 568 aa8.65□□□□□ -1.03
GTF3C3-205ENST00000448087 SERTAD1Q9UHV2 236 aa8.65□□□□□ -1.03
GTF3C3-205ENST00000448087 HRH3Q9Y5N1 445 aa8.65□□□□□ -1.03
GTF3C3-205ENST00000448087 ATG7O95352 703 aa8.64□□□□□ -1.03
GTF3C3-205ENST00000448087 DPYDQ12882 1025 aa8.64□□□□□ -1.03
GTF3C3-205ENST00000448087 ANKMY2Q8IV38 441 aa8.64□□□□□ -1.03
GTF3C3-205ENST00000448087 TRIM47Q96LD4 638 aa8.64□□□□□ -1.03
GTF3C3-205ENST00000448087 POTECB2RU33 542 aa8.63□□□□□ -1.03
GTF3C3-205ENST00000448087 PPP1R15AO75807 674 aaPredicted RBP8.63□□□□□ -1.03
GTF3C3-205ENST00000448087 RNF144AP50876 292 aaPredicted RBP8.63□□□□□ -1.03
GTF3C3-205ENST00000448087 CENPCQ03188 943 aa8.63□□□□□ -1.03
GTF3C3-205ENST00000448087 RNF217Q8TC41 542 aa8.63□□□□□ -1.03
GTF3C3-205ENST00000448087 KIFC2Q96AC6 838 aa8.63□□□□□ -1.03
GTF3C3-205ENST00000448087 ARXQ96QS3 562 aa8.63□□□□□ -1.03
GTF3C3-205ENST00000448087 RBM19Q9Y4C8 960 aaKnown RBP8.63□□□□□ -1.03
GTF3C3-205ENST00000448087 SFI1A8K8P3 1242 aa8.63□□□□□ -1.03
GTF3C3-205ENST00000448087 NOVA2Q9UNW9 492 aaKnown RBP8.63□□□□□ -1.03
GTF3C3-205ENST00000448087 GPC1P35052 558 aa8.62□□□□□ -1.03
GTF3C3-205ENST00000448087 TLR1Q15399 786 aa8.62□□□□□ -1.03
GTF3C3-205ENST00000448087 SLC4A9Q96Q91 983 aa8.62□□□□□ -1.03
GTF3C3-205ENST00000448087 FHDC1Q9C0D6 1143 aaPredicted RBP8.62□□□□□ -1.03
GTF3C3-205ENST00000448087 DNMT3LQ9UJW3 386 aa8.62□□□□□ -1.03
GTF3C3-205ENST00000448087 ZMIZ1Q9ULJ6 1067 aa8.62□□□□□ -1.03
GTF3C3-205ENST00000448087 FIGNL2A6NMB9 653 aa8.61□□□□□ -1.03
GTF3C3-205ENST00000448087 BACH1O14867 736 aa8.61□□□□□ -1.03
GTF3C3-205ENST00000448087 SNRPBP14678 240 aaKnown RBP8.61□□□□□ -1.03
GTF3C3-205ENST00000448087 SEC13P55735 322 aa8.61□□□□□ -1.03
GTF3C3-205ENST00000448087 ELOAQ14241 798 aaKnown RBP8.61□□□□□ -1.03
GTF3C3-205ENST00000448087 SLC27A3Q5K4L6 730 aa8.61□□□□□ -1.03
GTF3C3-205ENST00000448087 SOBPA7XYQ1 873 aa8.6□□□□□ -1.03
GTF3C3-205ENST00000448087 C11orf95C9JLR9 678 aaPredicted RBP8.6□□□□□ -1.03
GTF3C3-205ENST00000448087 SMTNP53814 917 aa8.6□□□□□ -1.03
GTF3C3-205ENST00000448087 TSEN2Q8NCE0 465 aaKnown RBP8.6□□□□□ -1.03
GTF3C3-205ENST00000448087 FAM200AQ8TCP9 573 aa8.6□□□□□ -1.03
GTF3C3-205ENST00000448087 GRIP2Q9C0E4 1043 aa8.6□□□□□ -1.03
GTF3C3-205ENST00000448087 MAN1A2O60476 641 aa8.6□□□□□ -1.03
GTF3C3-205ENST00000448087 STK32AQ8WU08 396 aa8.6□□□□□ -1.03
GTF3C3-205ENST00000448087 M0R2N6 131 aa8.59□□□□□ -1.03
GTF3C3-205ENST00000448087 TNS4Q8IZW8 715 aa8.59□□□□□ -1.03
GTF3C3-205ENST00000448087 ZSCAN10Q96SZ4 725 aaPredicted RBP8.59□□□□□ -1.03
GTF3C3-205ENST00000448087 ACIN1Q9UKV3 1341 aaKnown RBP8.58□□□□□ -1.04
GTF3C3-205ENST00000448087 A6NJY4 79 aa8.58□□□□□ -1.04
GTF3C3-205ENST00000448087 EPHA4P54764 986 aa8.58□□□□□ -1.04
GTF3C3-205ENST00000448087 LYSMD3Q7Z3D4 306 aa8.58□□□□□ -1.04
GTF3C3-205ENST00000448087 PRICKLE2Q7Z3G6 844 aa8.58□□□□□ -1.04
GTF3C3-205ENST00000448087 MTFR1Q15390 333 aa8.57□□□□□ -1.04
GTF3C3-205ENST00000448087 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.57□□□□□ -1.04
GTF3C3-205ENST00000448087 SCHIP1Q9P0W5 487 aaPredicted RBP8.57□□□□□ -1.04
GTF3C3-205ENST00000448087 TMEM164Q5U3C3 297 aa8.57□□□□□ -1.04
GTF3C3-205ENST00000448087 TMEM214Q6NUQ4 689 aaKnown RBP8.57□□□□□ -1.04
GTF3C3-205ENST00000448087 USP3Q9Y6I4 520 aa8.57□□□□□ -1.04
GTF3C3-205ENST00000448087 LGR5O75473 907 aa8.56□□□□□ -1.04
GTF3C3-205ENST00000448087 FOXK2Q01167 660 aa8.56□□□□□ -1.04
GTF3C3-205ENST00000448087 POU4F2Q12837 409 aa8.56□□□□□ -1.04
GTF3C3-205ENST00000448087 ZNF787Q6DD87 383 aa8.56□□□□□ -1.04
GTF3C3-205ENST00000448087 PPARGC1BQ86YN6 1023 aaKnown RBP8.56□□□□□ -1.04
GTF3C3-205ENST00000448087 IQSEC3Q9UPP2 1182 aaPredicted RBP8.56□□□□□ -1.04
GTF3C3-205ENST00000448087 CDK2AP1O14519 115 aa8.55□□□□□ -1.04
GTF3C3-205ENST00000448087 GTF2E1P29083 439 aaPredicted RBP8.55□□□□□ -1.04
GTF3C3-205ENST00000448087 FAM69CQ0P6D2 419 aa8.55□□□□□ -1.04
GTF3C3-205ENST00000448087 HINFPQ9BQA5 517 aa8.55□□□□□ -1.04
GTF3C3-205ENST00000448087 SPATA31C2B4DYI2 1134 aa8.54□□□□□ -1.04
GTF3C3-205ENST00000448087 RHOQP17081 205 aa8.54□□□□□ -1.04
GTF3C3-205ENST00000448087 GNASQ5JWF2 1037 aa8.54□□□□□ -1.04
GTF3C3-205ENST00000448087 TBCELQ5QJ74 424 aa8.54□□□□□ -1.04
GTF3C3-205ENST00000448087 SLC9A9Q8IVB4 645 aa8.54□□□□□ -1.04
GTF3C3-205ENST00000448087 TSPAN10Q9H1Z9 355 aaPredicted RBP8.54□□□□□ -1.04
GTF3C3-205ENST00000448087 CSB-PGBD3P0DP91 1061 aa8.54□□□□□ -1.04
GTF3C3-205ENST00000448087 NBPF10Q6P3W6 841 aaKnown RBP8.54□□□□□ -1.04
GTF3C3-205ENST00000448087 TAS1R3Q7RTX0 852 aa8.54□□□□□ -1.04
GTF3C3-205ENST00000448087 NBPF15Q8N660 670 aa8.54□□□□□ -1.04
GTF3C3-205ENST00000448087 RHBDD1Q8TEB9 315 aa8.54□□□□□ -1.04
GTF3C3-205ENST00000448087 C4orf17Q53FE4 359 aa8.53□□□□□ -1.04
GTF3C3-205ENST00000448087 ZNF295-AS1Q8N0V1 137 aa8.53□□□□□ -1.04
GTF3C3-205ENST00000448087 PHKA2P46019 1235 aa8.52□□□□□ -1.05
GTF3C3-205ENST00000448087 PTSQ03393 145 aa8.52□□□□□ -1.05
GTF3C3-205ENST00000448087 SWI5Q1ZZU3 235 aa8.52□□□□□ -1.05
GTF3C3-205ENST00000448087 TMEM88BA6NKF7 163 aa8.51□□□□□ -1.05
GTF3C3-205ENST00000448087 WDR44Q5JSH3 913 aa8.51□□□□□ -1.05
GTF3C3-205ENST00000448087 SCG3Q8WXD2 468 aaKnown RBP8.51□□□□□ -1.05
GTF3C3-205ENST00000448087 NIFKQ9BYG3 293 aaKnown RBP8.51□□□□□ -1.05
GTF3C3-205ENST00000448087 CABP1Q9NZU7 370 aa8.51□□□□□ -1.05
GTF3C3-205ENST00000448087 SENP3-EIF4A1A0A087X0R7 540 aa8.51□□□□□ -1.05
GTF3C3-205ENST00000448087 CARNS1A5YM72 827 aa8.51□□□□□ -1.05
GTF3C3-205ENST00000448087 C21orf2O43822 256 aa8.51□□□□□ -1.05
GTF3C3-205ENST00000448087 RETREG2Q8NC44 543 aa8.51□□□□□ -1.05
GTF3C3-205ENST00000448087 PLA2G4AP47712 749 aa8.5□□□□□ -1.05
GTF3C3-205ENST00000448087 GAS2L2Q8NHY3 880 aa8.5□□□□□ -1.05
GTF3C3-205ENST00000448087 ZDHHC1Q8WTX9 485 aa8.5□□□□□ -1.05
GTF3C3-205ENST00000448087 TIMMDC1Q9NPL8 285 aa8.5□□□□□ -1.05
GTF3C3-205ENST00000448087 PARP3Q9Y6F1 533 aa8.5□□□□□ -1.05
GTF3C3-205ENST00000448087 PRMT3O60678 531 aa8.49□□□□□ -1.05
GTF3C3-205ENST00000448087 WEE1P30291 646 aa8.49□□□□□ -1.05
GTF3C3-205ENST00000448087 PRIMPOLQ96LW4 560 aa8.49□□□□□ -1.05
GTF3C3-205ENST00000448087 SLAIN2Q9P270 581 aa8.49□□□□□ -1.05
GTF3C3-205ENST00000448087 ATAD2Q6PL18 1390 aa8.49□□□□□ -1.05
GTF3C3-205ENST00000448087 PPP1R12BO60237 982 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms