RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 TRIM46Q7Z4K8 759 aa5.65□□□□□ -1.5
PMS1-216ENST00000447734 ANKRD13AQ8IZ07 590 aa5.65□□□□□ -1.5
PMS1-216ENST00000447734 SIX5Q8N196 739 aa5.65□□□□□ -1.5
PMS1-216ENST00000447734 PHTF2Q8N3S3 785 aa5.65□□□□□ -1.5
PMS1-216ENST00000447734 GTF3C2Q8WUA4 911 aaPredicted RBP5.65□□□□□ -1.5
PMS1-216ENST00000447734 KIFC2Q96AC6 838 aa5.65□□□□□ -1.5
PMS1-216ENST00000447734 BACH2Q9BYV9 841 aa5.65□□□□□ -1.5
PMS1-216ENST00000447734 MAP10Q9P2G4 905 aa5.65□□□□□ -1.5
PMS1-216ENST00000447734 CADPSQ9ULU8 1353 aa5.65□□□□□ -1.51
PMS1-216ENST00000447734 ANKRD62A6NC57 917 aa5.64□□□□□ -1.51
PMS1-216ENST00000447734 F12P00748 615 aaPredicted RBP5.64□□□□□ -1.51
PMS1-216ENST00000447734 BMP1P13497 986 aa5.64□□□□□ -1.51
PMS1-216ENST00000447734 PTK2Q05397 1052 aa5.64□□□□□ -1.51
PMS1-216ENST00000447734 SF3B2Q13435 895 aaKnown RBP5.64□□□□□ -1.51
PMS1-216ENST00000447734 RC3H1Q5TC82 1133 aaKnown RBP5.64□□□□□ -1.51
PMS1-216ENST00000447734 RGL4Q8IZJ4 473 aa5.64□□□□□ -1.51
PMS1-216ENST00000447734 NXF1Q9UBU9 619 aaKnown RBP5.64□□□□□ -1.51
PMS1-216ENST00000447734 CHIC2Q9UKJ5 165 aa5.64□□□□□ -1.51
PMS1-216ENST00000447734 KIAA1024Q9UPX6 916 aa5.64□□□□□ -1.51
PMS1-216ENST00000447734 GPSM3Q9Y4H4 160 aa5.64□□□□□ -1.51
PMS1-216ENST00000447734 ERBB4Q15303 1308 aa5.64□□□□□ -1.51
PMS1-216ENST00000447734 GTF2IP78347 998 aa5.63□□□□□ -1.51
PMS1-216ENST00000447734 HDLBPQ00341 1268 aaKnown RBP5.63□□□□□ -1.51
PMS1-216ENST00000447734 FKBP4Q02790 459 aaKnown RBP eCLIP5.63□□□□□ -1.51
PMS1-216ENST00000447734 ZSCAN1Q8NBB4 408 aa5.63□□□□□ -1.51
PMS1-216ENST00000447734 DOLKQ9UPQ8 538 aa5.63□□□□□ -1.51
PMS1-216ENST00000447734 DNMT3AQ9Y6K1 912 aaPredicted RBP5.63□□□□□ -1.51
PMS1-216ENST00000447734 SIAH2O43255 324 aa5.62□□□□□ -1.51
PMS1-216ENST00000447734 CTHP32929 405 aa5.62□□□□□ -1.51
PMS1-216ENST00000447734 ARHGAP4P98171 946 aa5.62□□□□□ -1.51
PMS1-216ENST00000447734 MRPL58Q14197 206 aaKnown RBP5.62□□□□□ -1.51
PMS1-216ENST00000447734 OXLD1Q5BKU9 147 aa5.62□□□□□ -1.51
PMS1-216ENST00000447734 C9orf131Q5VYM1 1079 aa5.62□□□□□ -1.51
PMS1-216ENST00000447734 CCDC102BQ68D86 513 aa5.62□□□□□ -1.51
PMS1-216ENST00000447734 DPH6Q7L8W6 267 aa5.62□□□□□ -1.51
PMS1-216ENST00000447734 PIK3R5Q8WYR1 880 aa5.62□□□□□ -1.51
PMS1-216ENST00000447734 USB1Q9BQ65 265 aaKnown RBP5.62□□□□□ -1.51
PMS1-216ENST00000447734 MKNK1Q9BUB5 465 aa5.62□□□□□ -1.51
PMS1-216ENST00000447734 TANGO6Q9C0B7 1094 aa5.62□□□□□ -1.51
PMS1-216ENST00000447734 SEPT3Q9UH03 358 aa5.62□□□□□ -1.51
PMS1-216ENST00000447734 TTBK1Q5TCY1 1321 aaPredicted RBP5.62□□□□□ -1.51
PMS1-216ENST00000447734 SFI1A8K8P3 1242 aa5.61□□□□□ -1.51
PMS1-216ENST00000447734 H3BM21 787 aa5.61□□□□□ -1.51
PMS1-216ENST00000447734 DKK1O94907 266 aa5.61□□□□□ -1.51
PMS1-216ENST00000447734 PSME1Q06323 249 aa5.61□□□□□ -1.51
PMS1-216ENST00000447734 MTMR3Q13615 1198 aa5.61□□□□□ -1.51
PMS1-216ENST00000447734 ECM1Q16610 540 aa5.61□□□□□ -1.51
PMS1-216ENST00000447734 PTPRNQ16849 979 aa5.61□□□□□ -1.51
PMS1-216ENST00000447734 PDXDC2PQ6P474 469 aa5.61□□□□□ -1.51
PMS1-216ENST00000447734 GIMAP6Q6P9H5 292 aa5.61□□□□□ -1.51
PMS1-216ENST00000447734 CCDC24Q8N4L8 307 aa5.61□□□□□ -1.51
PMS1-216ENST00000447734 ARMC2Q8NEN0 867 aa5.61□□□□□ -1.51
PMS1-216ENST00000447734 GPKOWQ92917 476 aaPredicted RBP eCLIP5.61□□□□□ -1.51
PMS1-216ENST00000447734 HINFPQ9BQA5 517 aa5.61□□□□□ -1.51
PMS1-216ENST00000447734 POLR3GLQ9BT43 218 aa5.61□□□□□ -1.51
PMS1-216ENST00000447734 HIRIP3Q9BW71 556 aaPredicted RBP5.61□□□□□ -1.51
PMS1-216ENST00000447734 ZBTB7BO15156 539 aaPredicted RBP5.6□□□□□ -1.51
PMS1-216ENST00000447734 P4HBP07237 508 aaKnown RBP5.6□□□□□ -1.51
PMS1-216ENST00000447734 ITGAEP38570 1179 aa5.6□□□□□ -1.51
PMS1-216ENST00000447734 WNT7BP56706 349 aa5.6□□□□□ -1.51
PMS1-216ENST00000447734 TSGA10IPQ3SY00 556 aa5.6□□□□□ -1.51
PMS1-216ENST00000447734 NBPF14Q5TI25 921 aa5.6□□□□□ -1.51
PMS1-216ENST00000447734 PTCRAQ6ISU1 281 aaPredicted RBP5.6□□□□□ -1.51
PMS1-216ENST00000447734 NPAS3Q8IXF0 933 aa5.6□□□□□ -1.51
PMS1-216ENST00000447734 TMEM87AQ8NBN3 555 aa5.6□□□□□ -1.51
PMS1-216ENST00000447734 TPCN2Q8NHX9 752 aa5.6□□□□□ -1.51
PMS1-216ENST00000447734 SLC16A10Q8TF71 515 aa5.6□□□□□ -1.51
PMS1-216ENST00000447734 DNAJC2Q99543 621 aaKnown RBP5.6□□□□□ -1.51
PMS1-216ENST00000447734 PTCD1O75127 700 aaKnown RBP5.59□□□□□ -1.51
PMS1-216ENST00000447734 LGR5O75473 907 aa5.59□□□□□ -1.51
PMS1-216ENST00000447734 ALDH1A1P00352 501 aa5.59□□□□□ -1.51
PMS1-216ENST00000447734 JUNDP17535 347 aa5.59□□□□□ -1.51
PMS1-216ENST00000447734 GSK3AP49840 483 aa5.59□□□□□ -1.51
PMS1-216ENST00000447734 XPCQ01831 940 aaPredicted RBP5.59□□□□□ -1.51
PMS1-216ENST00000447734 ADAM32Q8TC27 787 aa5.59□□□□□ -1.51
PMS1-216ENST00000447734 IRF7Q92985 503 aa5.59□□□□□ -1.51
PMS1-216ENST00000447734 OCSTAMPQ9BR26 566 aa5.59□□□□□ -1.51
PMS1-216ENST00000447734 MRS2Q9HD23 443 aa5.59□□□□□ -1.51
PMS1-216ENST00000447734 FAM181BA6NEQ2 426 aa5.58□□□□□ -1.52
PMS1-216ENST00000447734 FGD1P98174 961 aa5.58□□□□□ -1.52
PMS1-216ENST00000447734 RAD51AP2Q09MP3 1159 aa5.58□□□□□ -1.52
PMS1-216ENST00000447734 SUZ12Q15022 739 aaKnown RBP5.58□□□□□ -1.52
PMS1-216ENST00000447734 TMC7Q7Z402 723 aa5.58□□□□□ -1.52
PMS1-216ENST00000447734 ZBTB33Q86T24 672 aa5.58□□□□□ -1.52
PMS1-216ENST00000447734 NOP9Q86U38 636 aaKnown RBP5.58□□□□□ -1.52
PMS1-216ENST00000447734 NT5DC4Q86YG4 428 aa5.58□□□□□ -1.52
PMS1-216ENST00000447734 HELQQ8TDG4 1101 aa5.58□□□□□ -1.52
PMS1-216ENST00000447734 CCDC85AQ96PX6 553 aaPredicted RBP5.58□□□□□ -1.52
PMS1-216ENST00000447734 ARHGAP9Q9BRR9 750 aa5.58□□□□□ -1.52
PMS1-216ENST00000447734 CWC22Q9HCG8 908 aaKnown RBP5.58□□□□□ -1.52
PMS1-216ENST00000447734 BRPF3Q9ULD4 1205 aa5.58□□□□□ -1.52
PMS1-216ENST00000447734 NDUFB5O43674 189 aa5.57□□□□□ -1.52
PMS1-216ENST00000447734 FAM13AO94988 1023 aa5.57□□□□□ -1.52
PMS1-216ENST00000447734 ATP2B1P20020 1258 aa5.57□□□□□ -1.52
PMS1-216ENST00000447734 FKBP5Q13451 457 aaPredicted RBP5.57□□□□□ -1.52
PMS1-216ENST00000447734 DZIP3Q86Y13 1208 aaKnown RBP5.57□□□□□ -1.52
PMS1-216ENST00000447734 TINF2Q9BSI4 451 aa5.57□□□□□ -1.52
PMS1-216ENST00000447734 RBCK1Q9BYM8 510 aa5.57□□□□□ -1.52
PMS1-216ENST00000447734 LNPKQ9C0E8 428 aa5.57□□□□□ -1.52
PMS1-216ENST00000447734 CCSER2Q9H7U1 834 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms