RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 ITPK1Q13572 414 aa21.58■■□□□ 1.05
SPTLC1P1-201ENST00000447199 AK7Q96M32 723 aa21.57■■□□□ 1.04
SPTLC1P1-201ENST00000447199 CC2D1BQ5T0F9 858 aaKnown RBP21.56■■□□□ 1.04
SPTLC1P1-201ENST00000447199 SLC4A9Q96Q91 983 aa21.56■■□□□ 1.04
SPTLC1P1-201ENST00000447199 UBR3Q6ZT12 1888 aa21.56■■□□□ 1.04
SPTLC1P1-201ENST00000447199 MSL1Q68DK7 614 aa21.55■■□□□ 1.04
SPTLC1P1-201ENST00000447199 SMIM5Q71RC9 77 aa21.55■■□□□ 1.04
SPTLC1P1-201ENST00000447199 SSFA2P28290 1259 aa21.54■■□□□ 1.04
SPTLC1P1-201ENST00000447199 ATP6V1AP38606 617 aa21.54■■□□□ 1.04
SPTLC1P1-201ENST00000447199 NLGN2Q8NFZ4 835 aa21.54■■□□□ 1.04
SPTLC1P1-201ENST00000447199 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.53■■□□□ 1.04
SPTLC1P1-201ENST00000447199 ZNF831Q5JPB2 1677 aa21.53■■□□□ 1.04
SPTLC1P1-201ENST00000447199 C1orf141Q5JVX7 400 aa21.52■■□□□ 1.04
SPTLC1P1-201ENST00000447199 COL3A1P02461 1466 aaPredicted RBP21.52■■□□□ 1.03
SPTLC1P1-201ENST00000447199 PHF14O94880 888 aa21.51■■□□□ 1.03
SPTLC1P1-201ENST00000447199 CABP4P57796 275 aa21.51■■□□□ 1.03
SPTLC1P1-201ENST00000447199 KLHL34Q8N239 644 aa21.51■■□□□ 1.03
SPTLC1P1-201ENST00000447199 GNPATO15228 680 aa21.49■■□□□ 1.03
SPTLC1P1-201ENST00000447199 DIAPH1O60610 1272 aaKnown RBP21.49■■□□□ 1.03
SPTLC1P1-201ENST00000447199 HMOX1P09601 288 aa21.48■■□□□ 1.03
SPTLC1P1-201ENST00000447199 AKAP4Q5JQC9 854 aa21.48■■□□□ 1.03
SPTLC1P1-201ENST00000447199 NFATC2IPQ8NCF5 419 aa21.48■■□□□ 1.03
SPTLC1P1-201ENST00000447199 RBM42Q9BTD8 480 aaKnown RBP21.47■■□□□ 1.03
SPTLC1P1-201ENST00000447199 GPR162Q16538 588 aa21.46■■□□□ 1.03
SPTLC1P1-201ENST00000447199 RC3H1Q5TC82 1133 aaKnown RBP21.46■■□□□ 1.03
SPTLC1P1-201ENST00000447199 CD2APQ9Y5K6 639 aa21.46■■□□□ 1.03
SPTLC1P1-201ENST00000447199 CNTNAP4Q9C0A0 1308 aa21.46■■□□□ 1.03
SPTLC1P1-201ENST00000447199 COL5A3P25940 1745 aaPredicted RBP21.45■■□□□ 1.02
SPTLC1P1-201ENST00000447199 MRC1P22897 1456 aa21.45■■□□□ 1.02
SPTLC1P1-201ENST00000447199 SCN11AQ9UI33 1791 aa21.44■■□□□ 1.02
SPTLC1P1-201ENST00000447199 MTHFSDQ2M296 383 aaKnown RBP21.44■■□□□ 1.02
SPTLC1P1-201ENST00000447199 LGR6Q9HBX8 967 aa21.44■■□□□ 1.02
SPTLC1P1-201ENST00000447199 PTCD1O75127 700 aaKnown RBP21.43■■□□□ 1.02
SPTLC1P1-201ENST00000447199 SLC52A2Q9HAB3 445 aa21.43■■□□□ 1.02
SPTLC1P1-201ENST00000447199 RTCBQ9Y3I0 505 aaKnown RBP21.43■■□□□ 1.02
SPTLC1P1-201ENST00000447199 CICQ96RK0 1608 aaPredicted RBP21.43■■□□□ 1.02
SPTLC1P1-201ENST00000447199 ADAMTS7Q9UKP4 1686 aa21.43■■□□□ 1.02
SPTLC1P1-201ENST00000447199 RNMTO43148 476 aaKnown RBP21.42■■□□□ 1.02
SPTLC1P1-201ENST00000447199 YBX3P16989 372 aaKnown RBP eCLIP21.42■■□□□ 1.02
SPTLC1P1-201ENST00000447199 RPS6KA4O75676 772 aa21.41■■□□□ 1.02
SPTLC1P1-201ENST00000447199 ADRA2BP18089 450 aa21.41■■□□□ 1.02
SPTLC1P1-201ENST00000447199 CNGB1Q14028 1251 aaPredicted RBP21.41■■□□□ 1.02
SPTLC1P1-201ENST00000447199 TRAPPC3LQ5T215 181 aa21.41■■□□□ 1.02
SPTLC1P1-201ENST00000447199 ZNF784Q8NCA9 323 aaPredicted RBP21.41■■□□□ 1.02
SPTLC1P1-201ENST00000447199 ARHGEF1Q92888 912 aaKnown RBP21.4■■□□□ 1.02
SPTLC1P1-201ENST00000447199 TJP1Q07157 1748 aa21.39■■□□□ 1.01
SPTLC1P1-201ENST00000447199 PELP1Q8IZL8 1130 aaKnown RBP21.39■■□□□ 1.01
SPTLC1P1-201ENST00000447199 MYH14Q7Z406 1995 aaKnown RBP21.39■■□□□ 1.01
SPTLC1P1-201ENST00000447199 CHD4Q14839 1912 aa21.39■■□□□ 1.01
SPTLC1P1-201ENST00000447199 CRKLP46109 303 aaKnown RBP21.38■■□□□ 1.01
SPTLC1P1-201ENST00000447199 MMP10P09238 476 aa21.37■■□□□ 1.01
SPTLC1P1-201ENST00000447199 KCPQ6ZWJ8 1503 aa21.36■■□□□ 1.01
SPTLC1P1-201ENST00000447199 U2SURPO15042 1029 aaKnown RBP21.36■■□□□ 1.01
SPTLC1P1-201ENST00000447199 GRIN3BO60391 1043 aa21.36■■□□□ 1.01
SPTLC1P1-201ENST00000447199 GYS1P13807 737 aa21.36■■□□□ 1.01
SPTLC1P1-201ENST00000447199 INTS5Q6P9B9 1019 aaKnown RBP21.35■■□□□ 1.01
SPTLC1P1-201ENST00000447199 NLGN1Q8N2Q7 840 aa21.35■■□□□ 1.01
SPTLC1P1-201ENST00000447199 SLC39A6Q13433 755 aa21.34■■□□□ 1.01
SPTLC1P1-201ENST00000447199 C4AP0C0L4 1744 aa21.33■■□□□ 1.01
SPTLC1P1-201ENST00000447199 PPP2R1AP30153 589 aa21.33■■□□□ 1.01
SPTLC1P1-201ENST00000447199 RFC4P35249 363 aa21.33■■□□□ 1.01
SPTLC1P1-201ENST00000447199 DNAJC10Q8IXB1 793 aa21.33■■□□□ 1.01
SPTLC1P1-201ENST00000447199 IL17REQ8NFR9 667 aa21.32■■□□□ 1
SPTLC1P1-201ENST00000447199 RSPH6AQ9H0K4 717 aa21.32■■□□□ 1
SPTLC1P1-201ENST00000447199 CYP19A1P11511 503 aaPredicted RBP21.31■■□□□ 1
SPTLC1P1-201ENST00000447199 GAS2L2Q8NHY3 880 aa21.31■■□□□ 1
SPTLC1P1-201ENST00000447199 CFAP53Q96M91 514 aa21.31■■□□□ 1
SPTLC1P1-201ENST00000447199 USP42Q9H9J4 1324 aaKnown RBP21.3■■□□□ 1
SPTLC1P1-201ENST00000447199 C10orf71Q711Q0 1435 aa21.3■■□□□ 1
SPTLC1P1-201ENST00000447199 VSIG10Q8N0Z9 540 aa21.3■■□□□ 1
SPTLC1P1-201ENST00000447199 PHACTR3Q96KR7 559 aa21.3■■□□□ 1
SPTLC1P1-201ENST00000447199 CCDC87Q9NVE4 849 aa21.3■■□□□ 1
SPTLC1P1-201ENST00000447199 VIRMAQ69YN4 1812 aaKnown RBP21.29■■□□□ 1
SPTLC1P1-201ENST00000447199 PXDNLA1KZ92 1463 aa21.29■■□□□ 1
SPTLC1P1-201ENST00000447199 CEMIPQ8WUJ3 1361 aa21.29■■□□□ 1
SPTLC1P1-201ENST00000447199 GNAT3A8MTJ3 354 aa21.29■■□□□ 1
SPTLC1P1-201ENST00000447199 SRP68Q9UHB9 627 aaKnown RBP21.29■■□□□ 1
SPTLC1P1-201ENST00000447199 KIF13BQ9NQT8 1826 aa21.29■■□□□ 1
SPTLC1P1-201ENST00000447199 SOS1Q07889 1333 aaPredicted RBP21.29■■□□□ 1
SPTLC1P1-201ENST00000447199 UBR2Q8IWV8 1755 aa21.28■■□□□ 1
SPTLC1P1-201ENST00000447199 PRKAR2BP31323 418 aa21.28■■□□□ 1
SPTLC1P1-201ENST00000447199 KIAA1551Q9HCM1 1747 aa21.28■■□□□ 1
SPTLC1P1-201ENST00000447199 FKBP8Q14318 412 aa21.27■■□□□ 1
SPTLC1P1-201ENST00000447199 TGFB2P61812 414 aa21.26■□□□□ 0.99
SPTLC1P1-201ENST00000447199 NUDCQ9Y266 331 aa21.26■□□□□ 0.99
SPTLC1P1-201ENST00000447199 ZBTB1Q9Y2K1 713 aa21.25■□□□□ 0.99
SPTLC1P1-201ENST00000447199 PARP3Q9Y6F1 533 aa21.25■□□□□ 0.99
SPTLC1P1-201ENST00000447199 SIPA1L3O60292 1781 aaPredicted RBP21.24■□□□□ 0.99
SPTLC1P1-201ENST00000447199 DDR1Q08345 913 aa21.24■□□□□ 0.99
SPTLC1P1-201ENST00000447199 TEFQ10587 303 aa21.24■□□□□ 0.99
SPTLC1P1-201ENST00000447199 ZNF790Q6PG37 636 aa21.24■□□□□ 0.99
SPTLC1P1-201ENST00000447199 WWC3Q9ULE0 1092 aa21.24■□□□□ 0.99
SPTLC1P1-201ENST00000447199 FCHSD2O94868 740 aa21.23■□□□□ 0.99
SPTLC1P1-201ENST00000447199 U2AF1L5P0DN76 240 aaPredicted RBP21.23■□□□□ 0.99
SPTLC1P1-201ENST00000447199 U2AF1Q01081 240 aaKnown RBP eCLIP21.23■□□□□ 0.99
SPTLC1P1-201ENST00000447199 ZNF496Q96IT1 587 aaPredicted RBP21.23■□□□□ 0.99
SPTLC1P1-201ENST00000447199 TM4SF1P30408 202 aa21.22■□□□□ 0.99
SPTLC1P1-201ENST00000447199 TTC5Q8N0Z6 440 aa21.22■□□□□ 0.99
SPTLC1P1-201ENST00000447199 ADCY9O60503 1353 aa21.22■□□□□ 0.99
SPTLC1P1-201ENST00000447199 COL15A1P39059 1388 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms