RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 RGPD2P0DJD1 1756 aa11.94□□□□□ -0.5
COL6A4P1-201ENST00000446690 EIF4A1P60842 406 aaKnown RBP11.94□□□□□ -0.5
COL6A4P1-201ENST00000446690 DDRGK1Q96HY6 314 aa11.94□□□□□ -0.5
COL6A4P1-201ENST00000446690 CCT4P50991 539 aaKnown RBP11.93□□□□□ -0.5
COL6A4P1-201ENST00000446690 TATP17735 454 aaPredicted RBP11.93□□□□□ -0.5
COL6A4P1-201ENST00000446690 PHAXQ9H814 394 aaKnown RBP11.93□□□□□ -0.5
COL6A4P1-201ENST00000446690 PHRF1Q9P1Y6 1649 aaKnown RBP11.93□□□□□ -0.5
COL6A4P1-201ENST00000446690 DAXXQ9UER7 740 aaPredicted RBP11.92□□□□□ -0.5
COL6A4P1-201ENST00000446690 ALS2Q96Q42 1657 aa11.92□□□□□ -0.5
COL6A4P1-201ENST00000446690 PXDNQ92626 1479 aa11.92□□□□□ -0.5
COL6A4P1-201ENST00000446690 APBB1O00213 710 aa11.92□□□□□ -0.5
COL6A4P1-201ENST00000446690 SLC4A3P48751 1232 aa11.92□□□□□ -0.5
COL6A4P1-201ENST00000446690 SOS1Q07889 1333 aaPredicted RBP11.92□□□□□ -0.5
COL6A4P1-201ENST00000446690 LRRC37A3O60309 1634 aa11.91□□□□□ -0.5
COL6A4P1-201ENST00000446690 CEP85Q6P2H3 762 aa11.91□□□□□ -0.5
COL6A4P1-201ENST00000446690 RPAP2Q8IXW5 612 aaPredicted RBP11.91□□□□□ -0.5
COL6A4P1-201ENST00000446690 ANKRD44Q8N8A2 993 aa11.91□□□□□ -0.5
COL6A4P1-201ENST00000446690 UPF2Q9HAU5 1272 aaKnown RBP11.91□□□□□ -0.5
COL6A4P1-201ENST00000446690 DEKP35659 375 aaKnown RBP11.91□□□□□ -0.5
COL6A4P1-201ENST00000446690 PRDM11Q9NQV5 511 aa11.91□□□□□ -0.5
COL6A4P1-201ENST00000446690 CHPF2Q9P2E5 772 aa11.91□□□□□ -0.5
COL6A4P1-201ENST00000446690 SPG7Q9UQ90 795 aa11.91□□□□□ -0.5
COL6A4P1-201ENST00000446690 STRCQ7RTU9 1775 aa11.9□□□□□ -0.5
COL6A4P1-201ENST00000446690 ANXA1P04083 346 aa11.9□□□□□ -0.5
COL6A4P1-201ENST00000446690 DCTPP1Q9H773 170 aa11.89□□□□□ -0.51
COL6A4P1-201ENST00000446690 NCAPD2Q15021 1401 aa11.89□□□□□ -0.51
COL6A4P1-201ENST00000446690 RGPD5Q99666 1765 aa11.88□□□□□ -0.51
COL6A4P1-201ENST00000446690 GNAI2P04899 355 aa11.88□□□□□ -0.51
COL6A4P1-201ENST00000446690 SLC39A6Q13433 755 aa11.88□□□□□ -0.51
COL6A4P1-201ENST00000446690 PRAMEF22A3QJZ6 481 aa11.88□□□□□ -0.51
COL6A4P1-201ENST00000446690 PHKG2P15735 406 aa11.88□□□□□ -0.51
COL6A4P1-201ENST00000446690 MFAP1P55081 439 aaKnown RBP11.88□□□□□ -0.51
COL6A4P1-201ENST00000446690 TOM1L2Q6ZVM7 507 aa11.88□□□□□ -0.51
COL6A4P1-201ENST00000446690 NFATC2IPQ8NCF5 419 aa11.88□□□□□ -0.51
COL6A4P1-201ENST00000446690 CHMP4AQ9BY43 222 aa11.88□□□□□ -0.51
COL6A4P1-201ENST00000446690 SOS2Q07890 1332 aaPredicted RBP11.87□□□□□ -0.51
COL6A4P1-201ENST00000446690 HOXB7P09629 217 aa11.87□□□□□ -0.51
COL6A4P1-201ENST00000446690 C16orf71Q8IYS4 520 aaPredicted RBP11.87□□□□□ -0.51
COL6A4P1-201ENST00000446690 IFNL2Q8IZJ0 200 aa11.87□□□□□ -0.51
COL6A4P1-201ENST00000446690 SMARCA5O60264 1052 aaPredicted RBP11.87□□□□□ -0.51
COL6A4P1-201ENST00000446690 HMMRO75330 724 aa11.87□□□□□ -0.51
COL6A4P1-201ENST00000446690 GIGYF1O75420 1035 aaPredicted RBP11.87□□□□□ -0.51
COL6A4P1-201ENST00000446690 GNAI3P08754 354 aa11.87□□□□□ -0.51
COL6A4P1-201ENST00000446690 NBR1Q14596 966 aa11.87□□□□□ -0.51
COL6A4P1-201ENST00000446690 ATP10DQ9P241 1426 aa11.86□□□□□ -0.51
COL6A4P1-201ENST00000446690 PI4KAP2A4QPH2 592 aa11.86□□□□□ -0.51
COL6A4P1-201ENST00000446690 PI4KAP1Q8N8J0 262 aa11.86□□□□□ -0.51
COL6A4P1-201ENST00000446690 STRN4Q9NRL3 753 aa11.86□□□□□ -0.51
COL6A4P1-201ENST00000446690 CPDO75976 1380 aa11.86□□□□□ -0.51
COL6A4P1-201ENST00000446690 XIRP1Q702N8 1843 aaKnown RBP11.86□□□□□ -0.51
COL6A4P1-201ENST00000446690 MEGF6O75095 1541 aa11.86□□□□□ -0.51
COL6A4P1-201ENST00000446690 EVA1CP58658 441 aa11.86□□□□□ -0.51
COL6A4P1-201ENST00000446690 SLC52A2Q9HAB3 445 aa11.86□□□□□ -0.51
COL6A4P1-201ENST00000446690 DBF4Q9UBU7 674 aaPredicted RBP11.86□□□□□ -0.51
COL6A4P1-201ENST00000446690 LMO7Q8WWI1 1683 aa11.86□□□□□ -0.51
COL6A4P1-201ENST00000446690 ZNF790Q6PG37 636 aa11.85□□□□□ -0.51
COL6A4P1-201ENST00000446690 SRCIN1Q9C0H9 1055 aa11.85□□□□□ -0.51
COL6A4P1-201ENST00000446690 USP44Q9H0E7 712 aa11.85□□□□□ -0.51
COL6A4P1-201ENST00000446690 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.85□□□□□ -0.51
COL6A4P1-201ENST00000446690 LRRFIP2Q9Y608 721 aaKnown RBP11.85□□□□□ -0.51
COL6A4P1-201ENST00000446690 CYP27B1O15528 508 aa11.85□□□□□ -0.51
COL6A4P1-201ENST00000446690 UBTFL1P0CB47 393 aaPredicted RBP11.85□□□□□ -0.51
COL6A4P1-201ENST00000446690 BMP2KLQ5H9B9 411 aa11.85□□□□□ -0.51
COL6A4P1-201ENST00000446690 AIMP1Q12904 312 aaKnown RBP11.84□□□□□ -0.51
COL6A4P1-201ENST00000446690 PROSER3Q2NL68 480 aa11.84□□□□□ -0.51
COL6A4P1-201ENST00000446690 DNAAF4Q8WXU2 420 aa11.84□□□□□ -0.51
COL6A4P1-201ENST00000446690 CABP4P57796 275 aa11.83□□□□□ -0.51
COL6A4P1-201ENST00000446690 PLEKHM2Q8IWE5 1019 aa11.83□□□□□ -0.51
COL6A4P1-201ENST00000446690 OTUD7AQ8TE49 926 aaPredicted RBP11.83□□□□□ -0.51
COL6A4P1-201ENST00000446690 DCAF5Q96JK2 942 aa11.83□□□□□ -0.51
COL6A4P1-201ENST00000446690 TBC1D32Q96NH3 1257 aa11.83□□□□□ -0.51
COL6A4P1-201ENST00000446690 USP35Q9P2H5 1018 aa11.83□□□□□ -0.51
COL6A4P1-201ENST00000446690 EXOC6BQ9Y2D4 811 aa11.83□□□□□ -0.51
COL6A4P1-201ENST00000446690 OVOS2A0A0G2JMS6 1433 aa11.83□□□□□ -0.52
COL6A4P1-201ENST00000446690 PNMA6EA0A0J9YXQ4 647 aa11.83□□□□□ -0.52
COL6A4P1-201ENST00000446690 TTC5Q8N0Z6 440 aa11.83□□□□□ -0.52
COL6A4P1-201ENST00000446690 C22orf23Q9BZE7 217 aa11.83□□□□□ -0.52
COL6A4P1-201ENST00000446690 FAM208AQ9UK61 1670 aaKnown RBP11.83□□□□□ -0.52
COL6A4P1-201ENST00000446690 CAMTA1Q9Y6Y1 1673 aa11.83□□□□□ -0.52
COL6A4P1-201ENST00000446690 WDR17Q8IZU2 1322 aa11.83□□□□□ -0.52
COL6A4P1-201ENST00000446690 KDM6AO15550 1401 aaPredicted RBP11.83□□□□□ -0.52
COL6A4P1-201ENST00000446690 ATP8B2P98198 1209 aa11.82□□□□□ -0.52
COL6A4P1-201ENST00000446690 MAP3K2Q9Y2U5 619 aa11.82□□□□□ -0.52
COL6A4P1-201ENST00000446690 COL18A1P39060 1754 aa11.82□□□□□ -0.52
COL6A4P1-201ENST00000446690 HSP90AB1P08238 724 aaKnown RBP11.82□□□□□ -0.52
COL6A4P1-201ENST00000446690 NBPF7P0C2Y1 421 aaPredicted RBP11.82□□□□□ -0.52
COL6A4P1-201ENST00000446690 MYL6BP14649 208 aa11.82□□□□□ -0.52
COL6A4P1-201ENST00000446690 BEND3Q5T5X7 828 aa11.82□□□□□ -0.52
COL6A4P1-201ENST00000446690 LARP1Q6PKG0 1096 aaKnown RBP11.82□□□□□ -0.52
COL6A4P1-201ENST00000446690 ZCRB1Q8TBF4 217 aaKnown RBP11.82□□□□□ -0.52
COL6A4P1-201ENST00000446690 DDX54Q8TDD1 881 aaKnown RBP11.82□□□□□ -0.52
COL6A4P1-201ENST00000446690 ZNF496Q96IT1 587 aaPredicted RBP11.81□□□□□ -0.52
COL6A4P1-201ENST00000446690 KDM3BQ7LBC6 1761 aa11.81□□□□□ -0.52
COL6A4P1-201ENST00000446690 HYPKQ9NX55 129 aa11.81□□□□□ -0.52
COL6A4P1-201ENST00000446690 HEG1Q9ULI3 1381 aa11.8□□□□□ -0.52
COL6A4P1-201ENST00000446690 GSPT1P15170 499 aaKnown RBP11.8□□□□□ -0.52
COL6A4P1-201ENST00000446690 ADCY9O60503 1353 aa11.8□□□□□ -0.52
COL6A4P1-201ENST00000446690 PIP4K2AP48426 406 aaPredicted RBP11.8□□□□□ -0.52
COL6A4P1-201ENST00000446690 BECN1Q14457 450 aa11.8□□□□□ -0.52
COL6A4P1-201ENST00000446690 KSR2Q6VAB6 950 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms