RNA–Protein interactions for RNA: ENST00000446198.5

PODXL-203, Transcript of podocalyxin like, humanhuman

TSL 2

Gene PODXL, Length 6,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PODXL-203ENST00000446198 CLIP2Q9UDT6 1046 aa16.69■□□□□ 0.26
PODXL-203ENST00000446198 USP25Q9UHP3 1055 aa16.69■□□□□ 0.26
PODXL-203ENST00000446198 SFPQP23246 707 aaKnown RBP eCLIP16.69■□□□□ 0.26
PODXL-203ENST00000446198 WASF1Q92558 559 aa16.69■□□□□ 0.26
PODXL-203ENST00000446198 CASQ1P31415 396 aa16.69■□□□□ 0.26
PODXL-203ENST00000446198 TRMT1Q9NXH9 659 aaKnown RBP16.69■□□□□ 0.26
PODXL-203ENST00000446198 TAF4BQ92750 862 aa16.68■□□□□ 0.26
PODXL-203ENST00000446198 ABCF2Q9UG63 623 aa16.68■□□□□ 0.26
PODXL-203ENST00000446198 GOLGA6L7A0A1B0GV03 622 aa16.68■□□□□ 0.26
PODXL-203ENST00000446198 NUTM2BA6NNL0 878 aaPredicted RBP16.68■□□□□ 0.26
PODXL-203ENST00000446198 NUTM2EB1AL46 878 aaPredicted RBP16.68■□□□□ 0.26
PODXL-203ENST00000446198 NUTM2AQ8IVF1 878 aaPredicted RBP16.68■□□□□ 0.26
PODXL-203ENST00000446198 PPP1R1BQ9UD71 204 aaPredicted RBP16.68■□□□□ 0.26
PODXL-203ENST00000446198 ZRSR2Q15696 482 aaKnown RBP16.68■□□□□ 0.26
PODXL-203ENST00000446198 ZSCAN29Q8IWY8 852 aaPredicted RBP16.68■□□□□ 0.26
PODXL-203ENST00000446198 URI1O94763 535 aaPredicted RBP16.68■□□□□ 0.26
PODXL-203ENST00000446198 CCDC8Q9H0W5 538 aaPredicted RBP16.68■□□□□ 0.26
PODXL-203ENST00000446198 ZNF76P36508 570 aa16.68■□□□□ 0.26
PODXL-203ENST00000446198 NKTRP30414 1462 aaKnown RBP16.67■□□□□ 0.26
PODXL-203ENST00000446198 SSR1P43307 286 aaKnown RBP16.67■□□□□ 0.26
PODXL-203ENST00000446198 TIAM1Q13009 1591 aa16.67■□□□□ 0.26
PODXL-203ENST00000446198 CCDC82Q8N4S0 544 aa16.67■□□□□ 0.26
PODXL-203ENST00000446198 CEP131Q9UPN4 1083 aa16.67■□□□□ 0.26
PODXL-203ENST00000446198 MATR3P43243 847 aaKnown RBP eCLIP16.67■□□□□ 0.26
PODXL-203ENST00000446198 METTL24Q5JXM2 366 aa16.67■□□□□ 0.26
PODXL-203ENST00000446198 USHBP1Q8N6Y0 703 aa16.67■□□□□ 0.26
PODXL-203ENST00000446198 MYD88Q99836 296 aa16.67■□□□□ 0.26
PODXL-203ENST00000446198 GLRX3O76003 335 aaKnown RBP16.66■□□□□ 0.26
PODXL-203ENST00000446198 ANO10Q9NW15 660 aa16.66■□□□□ 0.26
PODXL-203ENST00000446198 RBM27Q9P2N5 1060 aaKnown RBP16.66■□□□□ 0.26
PODXL-203ENST00000446198 MINDY4BA8MYZ0 360 aa16.66■□□□□ 0.26
PODXL-203ENST00000446198 ATAD2Q6PL18 1390 aa16.66■□□□□ 0.26
PODXL-203ENST00000446198 RAB11FIP3O75154 756 aa16.66■□□□□ 0.26
PODXL-203ENST00000446198 IBSPP21815 317 aaPredicted RBP16.66■□□□□ 0.26
PODXL-203ENST00000446198 DNA2P51530 1060 aa16.66■□□□□ 0.26
PODXL-203ENST00000446198 ZC3H6P61129 1189 aaKnown RBP16.66■□□□□ 0.26
PODXL-203ENST00000446198 CPLX3Q8WVH0 158 aa16.66■□□□□ 0.26
PODXL-203ENST00000446198 ZNF397Q8NF99 534 aaPredicted RBP16.65■□□□□ 0.26
PODXL-203ENST00000446198 ANKRD18AQ8IVF6 992 aa16.65■□□□□ 0.26
PODXL-203ENST00000446198 NUDT16Q96DE0 195 aaKnown RBP16.65■□□□□ 0.26
PODXL-203ENST00000446198 C16orf45Q96MC5 204 aaPredicted RBP16.65■□□□□ 0.26
PODXL-203ENST00000446198 U3KPZ7 1027 aaPredicted RBP16.65■□□□□ 0.26
PODXL-203ENST00000446198 GRIN2BQ13224 1484 aa16.65■□□□□ 0.26
PODXL-203ENST00000446198 POLR3GO15318 223 aaPredicted RBP16.65■□□□□ 0.26
PODXL-203ENST00000446198 CRACR2AQ9BSW2 395 aa16.65■□□□□ 0.26
PODXL-203ENST00000446198 TOP1P11387 765 aaKnown RBP16.64■□□□□ 0.26
PODXL-203ENST00000446198 MPHOSPH10O00566 681 aaKnown RBP16.64■□□□□ 0.25
PODXL-203ENST00000446198 CCT2P78371 535 aaKnown RBP16.64■□□□□ 0.25
PODXL-203ENST00000446198 ZSCAN12O43309 604 aa16.64■□□□□ 0.25
PODXL-203ENST00000446198 TNNT1P13805 278 aa16.64■□□□□ 0.25
PODXL-203ENST00000446198 IGHMBP2P38935 993 aaKnown RBP16.64■□□□□ 0.25
PODXL-203ENST00000446198 WAPLQ7Z5K2 1190 aa16.64■□□□□ 0.25
PODXL-203ENST00000446198 KIF18AQ8NI77 898 aa16.64■□□□□ 0.25
PODXL-203ENST00000446198 C8orf76Q96K31 380 aa16.64■□□□□ 0.25
PODXL-203ENST00000446198 SPA17Q15506 151 aa16.63■□□□□ 0.25
PODXL-203ENST00000446198 KIF4BQ2VIQ3 1234 aa16.63■□□□□ 0.25
PODXL-203ENST00000446198 SCAND2PQ9GZW5 306 aaPredicted RBP16.63■□□□□ 0.25
PODXL-203ENST00000446198 SUPT6HQ7KZ85 1726 aaKnown RBP16.63■□□□□ 0.25
PODXL-203ENST00000446198 KIF5CO60282 957 aa16.63■□□□□ 0.25
PODXL-203ENST00000446198 IFIT1P09914 478 aaKnown RBP16.63■□□□□ 0.25
PODXL-203ENST00000446198 ALDH1L2Q3SY69 923 aa16.63■□□□□ 0.25
PODXL-203ENST00000446198 JAKMIP3Q5VZ66 844 aa16.63■□□□□ 0.25
PODXL-203ENST00000446198 PHF23Q9BUL5 403 aaPredicted RBP16.63■□□□□ 0.25
PODXL-203ENST00000446198 TAF7Q15545 349 aaPredicted RBP16.63■□□□□ 0.25
PODXL-203ENST00000446198 TRERF1Q96PN7 1200 aa16.63■□□□□ 0.25
PODXL-203ENST00000446198 CCDC113Q9H0I3 377 aa16.63■□□□□ 0.25
PODXL-203ENST00000446198 TFIP11Q9UBB9 837 aaKnown RBP16.63■□□□□ 0.25
PODXL-203ENST00000446198 PPFIA3O75145 1194 aa16.63■□□□□ 0.25
PODXL-203ENST00000446198 BIN1O00499 593 aa16.62■□□□□ 0.25
PODXL-203ENST00000446198 GBP2P32456 591 aaPredicted RBP16.62■□□□□ 0.25
PODXL-203ENST00000446198 TSHZ3Q63HK5 1081 aa16.62■□□□□ 0.25
PODXL-203ENST00000446198 HECW1Q76N89 1606 aa16.62■□□□□ 0.25
PODXL-203ENST00000446198 PTCD1O75127 700 aaKnown RBP16.62■□□□□ 0.25
PODXL-203ENST00000446198 GJB2P29033 226 aa16.62■□□□□ 0.25
PODXL-203ENST00000446198 LIMCH1Q9UPQ0 1083 aa16.62■□□□□ 0.25
PODXL-203ENST00000446198 EFCAB5A4FU69 1503 aa16.62■□□□□ 0.25
PODXL-203ENST00000446198 RAPGEF3O95398 923 aa16.62■□□□□ 0.25
PODXL-203ENST00000446198 TRIM27P14373 513 aa16.62■□□□□ 0.25
PODXL-203ENST00000446198 SH2B1Q9NRF2 756 aaPredicted RBP16.62■□□□□ 0.25
PODXL-203ENST00000446198 TBC1D9Q6ZT07 1266 aa16.61■□□□□ 0.25
PODXL-203ENST00000446198 THEMISQ8N1K5 641 aaPredicted RBP16.61■□□□□ 0.25
PODXL-203ENST00000446198 PRDM11Q9NQV5 511 aa16.61■□□□□ 0.25
PODXL-203ENST00000446198 ADCY5O95622 1261 aa16.61■□□□□ 0.25
PODXL-203ENST00000446198 IGHDP01880 384 aa16.61■□□□□ 0.25
PODXL-203ENST00000446198 SLC52A1Q9NWF4 448 aa16.61■□□□□ 0.25
PODXL-203ENST00000446198 NME9Q86XW9 330 aa16.61■□□□□ 0.25
PODXL-203ENST00000446198 ISM2Q6H9L7 571 aa16.6■□□□□ 0.25
PODXL-203ENST00000446198 KIF2AO00139 706 aaPredicted RBP16.6■□□□□ 0.25
PODXL-203ENST00000446198 TROQ12816 1431 aaPredicted RBP16.6■□□□□ 0.25
PODXL-203ENST00000446198 FSIP1Q8NA03 581 aa16.6■□□□□ 0.25
PODXL-203ENST00000446198 NUP88Q99567 741 aaPredicted RBP16.6■□□□□ 0.25
PODXL-203ENST00000446198 EMILIN1Q9Y6C2 1016 aa16.6■□□□□ 0.25
PODXL-203ENST00000446198 PDIA4P13667 645 aaKnown RBP16.6■□□□□ 0.25
PODXL-203ENST00000446198 CCDC178Q5BJE1 867 aa16.6■□□□□ 0.25
PODXL-203ENST00000446198 TMC6Q7Z403 805 aa16.6■□□□□ 0.25
PODXL-203ENST00000446198 LRPPRCP42704 1394 aaKnown RBP16.6■□□□□ 0.25
PODXL-203ENST00000446198 UBA5Q9GZZ9 404 aa16.59■□□□□ 0.25
PODXL-203ENST00000446198 GBP3Q9H0R5 595 aa16.59■□□□□ 0.25
PODXL-203ENST00000446198 NAPBQ9H115 298 aa16.59■□□□□ 0.25
PODXL-203ENST00000446198 AKAP2Q9Y2D5 859 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms