RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 C10orf71Q711Q0 1435 aa20.68■□□□□ 0.9
UBE2F-216ENST00000445676 APLP1P51693 650 aa20.67■□□□□ 0.9
UBE2F-216ENST00000445676 TMF1P82094 1093 aa20.67■□□□□ 0.9
UBE2F-216ENST00000445676 TMOD3Q9NYL9 352 aa20.67■□□□□ 0.9
UBE2F-216ENST00000445676 SPG7Q9UQ90 795 aa20.67■□□□□ 0.9
UBE2F-216ENST00000445676 ATP6V1AP38606 617 aa20.66■□□□□ 0.9
UBE2F-216ENST00000445676 KDRP35968 1356 aa20.66■□□□□ 0.9
UBE2F-216ENST00000445676 DNAJC5GQ8N7S2 189 aa20.65■□□□□ 0.9
UBE2F-216ENST00000445676 CARD14Q9BXL6 1004 aa20.64■□□□□ 0.89
UBE2F-216ENST00000445676 ATG3Q9NT62 314 aa20.64■□□□□ 0.89
UBE2F-216ENST00000445676 BCS1LQ9Y276 419 aa20.64■□□□□ 0.89
UBE2F-216ENST00000445676 TOMM70O94826 608 aa20.63■□□□□ 0.89
UBE2F-216ENST00000445676 PHKG2P15735 406 aa20.63■□□□□ 0.89
UBE2F-216ENST00000445676 EYA1Q99502 592 aa20.63■□□□□ 0.89
UBE2F-216ENST00000445676 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.63■□□□□ 0.89
UBE2F-216ENST00000445676 A0A0G2JLW4 131 aa20.62■□□□□ 0.89
UBE2F-216ENST00000445676 PPM1GO15355 546 aaPredicted RBP20.62■□□□□ 0.89
UBE2F-216ENST00000445676 TGFB2P61812 414 aa20.62■□□□□ 0.89
UBE2F-216ENST00000445676 NMRK2Q9NPI5 230 aa20.62■□□□□ 0.89
UBE2F-216ENST00000445676 WASHC2AQ641Q2 1341 aa20.61■□□□□ 0.89
UBE2F-216ENST00000445676 IFNL2Q8IZJ0 200 aa20.61■□□□□ 0.89
UBE2F-216ENST00000445676 SLC4A9Q96Q91 983 aa20.61■□□□□ 0.89
UBE2F-216ENST00000445676 SBF1O95248 1867 aa20.6■□□□□ 0.89
UBE2F-216ENST00000445676 DPEP1P16444 411 aa20.59■□□□□ 0.89
UBE2F-216ENST00000445676 ARHGAP27Q6ZUM4 889 aa20.59■□□□□ 0.89
UBE2F-216ENST00000445676 RTCBQ9Y3I0 505 aaKnown RBP20.59■□□□□ 0.89
UBE2F-216ENST00000445676 TRAPPC3LQ5T215 181 aa20.58■□□□□ 0.89
UBE2F-216ENST00000445676 NLGN1Q8N2Q7 840 aa20.58■□□□□ 0.89
UBE2F-216ENST00000445676 GYS1P13807 737 aa20.57■□□□□ 0.88
UBE2F-216ENST00000445676 ARHGEF1Q92888 912 aaKnown RBP20.57■□□□□ 0.88
UBE2F-216ENST00000445676 CCDC87Q9NVE4 849 aa20.57■□□□□ 0.88
UBE2F-216ENST00000445676 PCNTO95613 3336 aa20.57■□□□□ 0.88
UBE2F-216ENST00000445676 CNTNAP4Q9C0A0 1308 aa20.56■□□□□ 0.88
UBE2F-216ENST00000445676 FCHSD2O94868 740 aa20.56■□□□□ 0.88
UBE2F-216ENST00000445676 ADRA2BP18089 450 aa20.56■□□□□ 0.88
UBE2F-216ENST00000445676 CDCA8Q53HL2 280 aa20.56■□□□□ 0.88
UBE2F-216ENST00000445676 TNRC6CQ9HCJ0 1690 aaKnown RBP20.56■□□□□ 0.88
UBE2F-216ENST00000445676 RBM46Q8TBY0 533 aaKnown RBP20.55■□□□□ 0.88
UBE2F-216ENST00000445676 POLKQ9UBT6 870 aa20.55■□□□□ 0.88
UBE2F-216ENST00000445676 PLEKHG2Q9H7P9 1386 aa20.55■□□□□ 0.88
UBE2F-216ENST00000445676 KCPQ6ZWJ8 1503 aa20.54■□□□□ 0.88
UBE2F-216ENST00000445676 TJP1Q07157 1748 aa20.54■□□□□ 0.88
UBE2F-216ENST00000445676 KCNA3P22001 575 aa20.54■□□□□ 0.88
UBE2F-216ENST00000445676 HTRA3P83110 453 aa20.54■□□□□ 0.88
UBE2F-216ENST00000445676 RC3H1Q5TC82 1133 aaKnown RBP20.54■□□□□ 0.88
UBE2F-216ENST00000445676 C9orf131Q5VYM1 1079 aa20.54■□□□□ 0.88
UBE2F-216ENST00000445676 RBM42Q9BTD8 480 aaKnown RBP20.54■□□□□ 0.88
UBE2F-216ENST00000445676 KDM6AO15550 1401 aaPredicted RBP20.53■□□□□ 0.88
UBE2F-216ENST00000445676 EIF4A2Q14240 407 aaKnown RBP20.53■□□□□ 0.88
UBE2F-216ENST00000445676 PARP3Q9Y6F1 533 aa20.53■□□□□ 0.88
UBE2F-216ENST00000445676 ADAMTS7Q9UKP4 1686 aa20.52■□□□□ 0.88
UBE2F-216ENST00000445676 RPS6KA4O75676 772 aa20.52■□□□□ 0.88
UBE2F-216ENST00000445676 ERVV-2B6SEH9 535 aa20.51■□□□□ 0.87
UBE2F-216ENST00000445676 RFC4P35249 363 aa20.51■□□□□ 0.87
UBE2F-216ENST00000445676 KLRG1Q96E93 195 aa20.51■□□□□ 0.87
UBE2F-216ENST00000445676 DCAF5Q96JK2 942 aa20.5■□□□□ 0.87
UBE2F-216ENST00000445676 AFDNP55196 1824 aaKnown RBP20.49■□□□□ 0.87
UBE2F-216ENST00000445676 C16orf71Q8IYS4 520 aaPredicted RBP20.49■□□□□ 0.87
UBE2F-216ENST00000445676 JMYQ8N9B5 988 aa20.49■□□□□ 0.87
UBE2F-216ENST00000445676 CCDC88AQ3V6T2 1871 aa20.48■□□□□ 0.87
UBE2F-216ENST00000445676 PIM2Q9P1W9 311 aa20.48■□□□□ 0.87
UBE2F-216ENST00000445676 SRP68Q9UHB9 627 aaKnown RBP20.48■□□□□ 0.87
UBE2F-216ENST00000445676 SCN11AQ9UI33 1791 aa20.48■□□□□ 0.87
UBE2F-216ENST00000445676 DDR1Q08345 913 aa20.47■□□□□ 0.87
UBE2F-216ENST00000445676 FSTL1Q12841 308 aa20.47■□□□□ 0.87
UBE2F-216ENST00000445676 COL13A1Q5TAT6 717 aaPredicted RBP20.47■□□□□ 0.87
UBE2F-216ENST00000445676 RNF181Q9P0P0 153 aa20.47■□□□□ 0.87
UBE2F-216ENST00000445676 VIRMAQ69YN4 1812 aaKnown RBP20.47■□□□□ 0.87
UBE2F-216ENST00000445676 HSP90AB1P08238 724 aaKnown RBP20.46■□□□□ 0.87
UBE2F-216ENST00000445676 FKBP8Q14318 412 aa20.46■□□□□ 0.87
UBE2F-216ENST00000445676 DLEC1Q9Y238 1755 aa20.46■□□□□ 0.87
UBE2F-216ENST00000445676 TNNT2P45379 298 aaPredicted RBP20.45■□□□□ 0.86
UBE2F-216ENST00000445676 CRKLP46109 303 aaKnown RBP20.45■□□□□ 0.86
UBE2F-216ENST00000445676 DALRD3Q5D0E6 543 aaKnown RBP20.45■□□□□ 0.86
UBE2F-216ENST00000445676 KDM2BQ8NHM5 1336 aa20.45■□□□□ 0.86
UBE2F-216ENST00000445676 USP42Q9H9J4 1324 aaKnown RBP20.45■□□□□ 0.86
UBE2F-216ENST00000445676 CHRNA5P30532 468 aa20.44■□□□□ 0.86
UBE2F-216ENST00000445676 CABP4P57796 275 aa20.44■□□□□ 0.86
UBE2F-216ENST00000445676 ZNF530Q6P9A1 599 aaPredicted RBP20.44■□□□□ 0.86
UBE2F-216ENST00000445676 PTCD1O75127 700 aaKnown RBP20.43■□□□□ 0.86
UBE2F-216ENST00000445676 RRAGCQ9HB90 399 aa20.43■□□□□ 0.86
UBE2F-216ENST00000445676 TIAM2Q8IVF5 1701 aa20.43■□□□□ 0.86
UBE2F-216ENST00000445676 NRXN2Q9P2S2 1712 aa20.42■□□□□ 0.86
UBE2F-216ENST00000445676 PLEKHO1Q53GL0 409 aaPredicted RBP20.42■□□□□ 0.86
UBE2F-216ENST00000445676 POLRMTO00411 1230 aaKnown RBP20.41■□□□□ 0.86
UBE2F-216ENST00000445676 MTHFSP49914 203 aa20.39■□□□□ 0.85
UBE2F-216ENST00000445676 RASSF7Q02833 373 aa20.39■□□□□ 0.85
UBE2F-216ENST00000445676 AMOTQ4VCS5 1084 aa20.39■□□□□ 0.85
UBE2F-216ENST00000445676 AEBP1Q8IUX7 1158 aa20.39■□□□□ 0.85
UBE2F-216ENST00000445676 CAPN15O75808 1086 aa20.38■□□□□ 0.85
UBE2F-216ENST00000445676 TM4SF1P30408 202 aa20.38■□□□□ 0.85
UBE2F-216ENST00000445676 INTS5Q6P9B9 1019 aaKnown RBP20.38■□□□□ 0.85
UBE2F-216ENST00000445676 NFATC2IPQ8NCF5 419 aa20.38■□□□□ 0.85
UBE2F-216ENST00000445676 SMC1BQ8NDV3 1235 aa20.38■□□□□ 0.85
UBE2F-216ENST00000445676 ZC3H4Q9UPT8 1303 aaKnown RBP20.36■□□□□ 0.85
UBE2F-216ENST00000445676 C1orf141Q5JVX7 400 aa20.36■□□□□ 0.85
UBE2F-216ENST00000445676 DICER1Q9UPY3 1922 aaKnown RBP20.35■□□□□ 0.85
UBE2F-216ENST00000445676 PRELPP51888 382 aa20.35■□□□□ 0.85
UBE2F-216ENST00000445676 TNS4Q8IZW8 715 aa20.35■□□□□ 0.85
UBE2F-216ENST00000445676 SOS1Q07889 1333 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms