RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 CSB-PGBD3P0DP91 1061 aa11.43□□□□□ -0.58
LINC02549-201ENST00000445346 NUP188Q5SRE5 1749 aa11.43□□□□□ -0.58
LINC02549-201ENST00000445346 RREB1Q92766 1687 aa11.43□□□□□ -0.58
LINC02549-201ENST00000445346 PRIM1P49642 420 aaKnown RBP11.42□□□□□ -0.58
LINC02549-201ENST00000445346 CDCA7Q9BWT1 371 aaPredicted RBP11.42□□□□□ -0.58
LINC02549-201ENST00000445346 LMO7Q8WWI1 1683 aa11.42□□□□□ -0.58
LINC02549-201ENST00000445346 AATKQ6ZMQ8 1374 aa11.41□□□□□ -0.58
LINC02549-201ENST00000445346 TOPAZ1Q8N9V7 1692 aa11.41□□□□□ -0.58
LINC02549-201ENST00000445346 ZBTB7AO95365 584 aa11.41□□□□□ -0.58
LINC02549-201ENST00000445346 STK32BQ9NY57 414 aa11.41□□□□□ -0.58
LINC02549-201ENST00000445346 AXIN2Q9Y2T1 843 aa11.41□□□□□ -0.58
LINC02549-201ENST00000445346 WDR17Q8IZU2 1322 aa11.4□□□□□ -0.58
LINC02549-201ENST00000445346 EXOC5O00471 708 aa11.4□□□□□ -0.58
LINC02549-201ENST00000445346 MAP3K9P80192 1104 aa11.4□□□□□ -0.58
LINC02549-201ENST00000445346 PTF1AQ7RTS3 328 aa11.4□□□□□ -0.58
LINC02549-201ENST00000445346 ZNF687Q8N1G0 1237 aa11.4□□□□□ -0.58
LINC02549-201ENST00000445346 MARCH10Q8NA82 808 aaPredicted RBP11.4□□□□□ -0.58
LINC02549-201ENST00000445346 KCNH5Q8NCM2 988 aa11.4□□□□□ -0.58
LINC02549-201ENST00000445346 ARIH1Q9Y4X5 557 aaPredicted RBP11.4□□□□□ -0.58
LINC02549-201ENST00000445346 USP6P35125 1406 aa11.4□□□□□ -0.58
LINC02549-201ENST00000445346 EVC2Q86UK5 1308 aa11.39□□□□□ -0.59
LINC02549-201ENST00000445346 PDGFDQ9GZP0 370 aaPredicted RBP11.39□□□□□ -0.59
LINC02549-201ENST00000445346 PARP4Q9UKK3 1724 aaKnown RBP11.39□□□□□ -0.59
LINC02549-201ENST00000445346 FOSBP53539 338 aa11.38□□□□□ -0.59
LINC02549-201ENST00000445346 PDIA6Q15084 440 aa11.38□□□□□ -0.59
LINC02549-201ENST00000445346 TXNRD1Q16881 649 aa11.38□□□□□ -0.59
LINC02549-201ENST00000445346 ARHGEF25Q86VW2 580 aa11.37□□□□□ -0.59
LINC02549-201ENST00000445346 CARD10Q9BWT7 1032 aa11.37□□□□□ -0.59
LINC02549-201ENST00000445346 PCDHGA10Q9Y5H3 936 aa11.37□□□□□ -0.59
LINC02549-201ENST00000445346 KIAA1210Q9ULL0 1709 aa11.37□□□□□ -0.59
LINC02549-201ENST00000445346 TBC1D12O60347 775 aa11.36□□□□□ -0.59
LINC02549-201ENST00000445346 SLC15A2Q16348 729 aa11.36□□□□□ -0.59
LINC02549-201ENST00000445346 WDR70Q9NW82 654 aa11.36□□□□□ -0.59
LINC02549-201ENST00000445346 TTC21BQ7Z4L5 1316 aa11.35□□□□□ -0.59
LINC02549-201ENST00000445346 CPSF1Q10570 1443 aaKnown RBP11.35□□□□□ -0.59
LINC02549-201ENST00000445346 SLIT3O75094 1523 aa11.35□□□□□ -0.59
LINC02549-201ENST00000445346 PTGER2P43116 358 aa11.35□□□□□ -0.59
LINC02549-201ENST00000445346 PEAK1Q9H792 1746 aa11.35□□□□□ -0.59
LINC02549-201ENST00000445346 LRRC37A3O60309 1634 aa11.35□□□□□ -0.59
LINC02549-201ENST00000445346 PSEN2P49810 448 aa11.34□□□□□ -0.59
LINC02549-201ENST00000445346 ZNF454Q8N9F8 522 aa11.34□□□□□ -0.59
LINC02549-201ENST00000445346 ZNF784Q8NCA9 323 aaPredicted RBP11.34□□□□□ -0.59
LINC02549-201ENST00000445346 ACSBG1Q96GR2 724 aa11.34□□□□□ -0.59
LINC02549-201ENST00000445346 SYT17Q9BSW7 474 aa11.34□□□□□ -0.59
LINC02549-201ENST00000445346 ADAM33Q9BZ11 813 aa11.34□□□□□ -0.59
LINC02549-201ENST00000445346 FHDC1Q9C0D6 1143 aaPredicted RBP11.34□□□□□ -0.59
LINC02549-201ENST00000445346 MTFR1LQ9H019 292 aa11.34□□□□□ -0.59
LINC02549-201ENST00000445346 BCL9O00512 1426 aa11.34□□□□□ -0.59
LINC02549-201ENST00000445346 TTC21AQ8NDW8 1320 aa11.34□□□□□ -0.59
LINC02549-201ENST00000445346 CCDC7Q96M83 1385 aa11.33□□□□□ -0.6
LINC02549-201ENST00000445346 DMRTA1Q5VZB9 504 aa11.33□□□□□ -0.6
LINC02549-201ENST00000445346 DDX12PQ92771 950 aa11.33□□□□□ -0.6
LINC02549-201ENST00000445346 NLRP2Q9NX02 1062 aa11.33□□□□□ -0.6
LINC02549-201ENST00000445346 RGPD3A6NKT7 1758 aaPredicted RBP11.33□□□□□ -0.6
LINC02549-201ENST00000445346 RGPD4Q7Z3J3 1758 aa11.33□□□□□ -0.6
LINC02549-201ENST00000445346 QRICH2Q9H0J4 1663 aa11.33□□□□□ -0.6
LINC02549-201ENST00000445346 KTN1Q86UP2 1357 aaKnown RBP11.32□□□□□ -0.6
LINC02549-201ENST00000445346 L3MBTL2Q969R5 705 aa11.32□□□□□ -0.6
LINC02549-201ENST00000445346 ARXQ96QS3 562 aa11.32□□□□□ -0.6
LINC02549-201ENST00000445346 SBF2Q86WG5 1849 aa11.32□□□□□ -0.6
LINC02549-201ENST00000445346 MLLT3P42568 568 aaPredicted RBP11.31□□□□□ -0.6
LINC02549-201ENST00000445346 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.31□□□□□ -0.6
LINC02549-201ENST00000445346 PIK3C2AO00443 1686 aa11.3□□□□□ -0.6
LINC02549-201ENST00000445346 ROCK2O75116 1388 aaKnown RBP11.3□□□□□ -0.6
LINC02549-201ENST00000445346 IL2RBP14784 551 aa11.3□□□□□ -0.6
LINC02549-201ENST00000445346 COL18A1P39060 1754 aa11.3□□□□□ -0.6
LINC02549-201ENST00000445346 AKAP12Q02952 1782 aa11.3□□□□□ -0.6
LINC02549-201ENST00000445346 CASZ1Q86V15 1759 aa11.3□□□□□ -0.6
LINC02549-201ENST00000445346 NEUROD1Q13562 356 aa11.29□□□□□ -0.6
LINC02549-201ENST00000445346 GPR162Q16538 588 aa11.29□□□□□ -0.6
LINC02549-201ENST00000445346 TMC1Q8TDI8 760 aa11.29□□□□□ -0.6
LINC02549-201ENST00000445346 MYOM1P52179 1685 aa11.29□□□□□ -0.6
LINC02549-201ENST00000445346 TNS2Q63HR2 1409 aa11.28□□□□□ -0.6
LINC02549-201ENST00000445346 SENP3-EIF4A1A0A087X0R7 540 aa11.28□□□□□ -0.6
LINC02549-201ENST00000445346 PCDH10Q9P2E7 1040 aa11.28□□□□□ -0.6
LINC02549-201ENST00000445346 TRPM1Q7Z4N2 1603 aa11.27□□□□□ -0.6
LINC02549-201ENST00000445346 POLD1P28340 1107 aa11.27□□□□□ -0.61
LINC02549-201ENST00000445346 HDGFL2Q7Z4V5 671 aaPredicted RBP11.27□□□□□ -0.61
LINC02549-201ENST00000445346 NME9Q86XW9 330 aa11.27□□□□□ -0.61
LINC02549-201ENST00000445346 VSIG10Q8N0Z9 540 aa11.27□□□□□ -0.61
LINC02549-201ENST00000445346 ANKRD24Q8TF21 1146 aa11.27□□□□□ -0.61
LINC02549-201ENST00000445346 ARHGEF1Q92888 912 aaKnown RBP11.27□□□□□ -0.61
LINC02549-201ENST00000445346 RGPD5Q99666 1765 aa11.26□□□□□ -0.61
LINC02549-201ENST00000445346 WNK3Q9BYP7 1800 aa11.26□□□□□ -0.61
LINC02549-201ENST00000445346 C1QTNF8P60827 252 aa11.26□□□□□ -0.61
LINC02549-201ENST00000445346 PPP4R3BQ5MIZ7 849 aa11.26□□□□□ -0.61
LINC02549-201ENST00000445346 SPNS2Q8IVW8 549 aa11.26□□□□□ -0.61
LINC02549-201ENST00000445346 DDX54Q8TDD1 881 aaKnown RBP11.26□□□□□ -0.61
LINC02549-201ENST00000445346 SIN3AQ96ST3 1273 aa11.26□□□□□ -0.61
LINC02549-201ENST00000445346 NFAT5O94916 1531 aa11.25□□□□□ -0.61
LINC02549-201ENST00000445346 COL9A1P20849 921 aa11.25□□□□□ -0.61
LINC02549-201ENST00000445346 ZNF827Q17R98 1081 aa11.25□□□□□ -0.61
LINC02549-201ENST00000445346 SYTL4Q96C24 671 aaPredicted RBP11.25□□□□□ -0.61
LINC02549-201ENST00000445346 LTV1Q96GA3 475 aaPredicted RBP11.25□□□□□ -0.61
LINC02549-201ENST00000445346 BCL2L12Q9HB09 334 aa11.25□□□□□ -0.61
LINC02549-201ENST00000445346 TFCP2L1Q9NZI6 479 aa11.25□□□□□ -0.61
LINC02549-201ENST00000445346 UTRNP46939 3433 aa11.25□□□□□ -0.61
LINC02549-201ENST00000445346 SEMA3EO15041 775 aa11.24□□□□□ -0.61
LINC02549-201ENST00000445346 PHF14O94880 888 aa11.24□□□□□ -0.61
LINC02549-201ENST00000445346 OSBPP22059 807 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms