RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 ABCC5O15440 1437 aa21.81■■□□□ 1.08
SHANK3-203ENST00000445220 CCAR1Q8IX12 1150 aaKnown RBP21.81■■□□□ 1.08
SHANK3-203ENST00000445220 ARHGEF11O15085 1522 aa21.81■■□□□ 1.08
SHANK3-203ENST00000445220 RPAP2Q8IXW5 612 aaPredicted RBP21.81■■□□□ 1.08
SHANK3-203ENST00000445220 PLEKHH1Q9ULM0 1364 aa21.81■■□□□ 1.08
SHANK3-203ENST00000445220 RBM33Q96EV2 1170 aaKnown RBP21.81■■□□□ 1.08
SHANK3-203ENST00000445220 UNC13AQ9UPW8 1703 aa21.81■■□□□ 1.08
SHANK3-203ENST00000445220 KIF5CO60282 957 aa21.8■■□□□ 1.08
SHANK3-203ENST00000445220 CDK5RAP3Q96JB5 506 aa21.8■■□□□ 1.08
SHANK3-203ENST00000445220 PAXBP1Q9Y5B6 917 aa21.8■■□□□ 1.08
SHANK3-203ENST00000445220 GTPBP4Q9BZE4 634 aaKnown RBP21.8■■□□□ 1.08
SHANK3-203ENST00000445220 ADCY5O95622 1261 aa21.8■■□□□ 1.08
SHANK3-203ENST00000445220 SKAP1Q86WV1 359 aa21.8■■□□□ 1.08
SHANK3-203ENST00000445220 TBC1D2BQ9UPU7 963 aa21.8■■□□□ 1.08
SHANK3-203ENST00000445220 POTEB2H3BUK9 544 aa21.79■■□□□ 1.08
SHANK3-203ENST00000445220 TRIM22Q8IYM9 498 aa21.79■■□□□ 1.08
SHANK3-203ENST00000445220 KIAA1328Q86T90 577 aa21.79■■□□□ 1.08
SHANK3-203ENST00000445220 IPO4Q8TEX9 1081 aaKnown RBP21.79■■□□□ 1.08
SHANK3-203ENST00000445220 KRT32Q14532 448 aa21.79■■□□□ 1.08
SHANK3-203ENST00000445220 ANKRD18AQ8IVF6 992 aa21.79■■□□□ 1.08
SHANK3-203ENST00000445220 SYCP1Q15431 976 aa21.78■■□□□ 1.08
SHANK3-203ENST00000445220 NSD3Q9BZ95 1437 aa21.78■■□□□ 1.08
SHANK3-203ENST00000445220 GSDMDP57764 484 aa21.78■■□□□ 1.08
SHANK3-203ENST00000445220 KIF4BQ2VIQ3 1234 aa21.78■■□□□ 1.08
SHANK3-203ENST00000445220 KIF14Q15058 1648 aa21.78■■□□□ 1.08
SHANK3-203ENST00000445220 BAG4O95429 457 aaKnown RBP21.77■■□□□ 1.08
SHANK3-203ENST00000445220 KIF6Q6ZMV9 814 aa21.77■■□□□ 1.08
SHANK3-203ENST00000445220 C20orf194Q5TEA3 1177 aa21.76■■□□□ 1.07
SHANK3-203ENST00000445220 SMARCC1Q92922 1105 aaPredicted RBP21.76■■□□□ 1.07
SHANK3-203ENST00000445220 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.76■■□□□ 1.07
SHANK3-203ENST00000445220 TRMT1Q9NXH9 659 aaKnown RBP21.76■■□□□ 1.07
SHANK3-203ENST00000445220 PLB1Q6P1J6 1458 aa21.76■■□□□ 1.07
SHANK3-203ENST00000445220 LMAN1P49257 510 aa21.76■■□□□ 1.07
SHANK3-203ENST00000445220 ZNF530Q6P9A1 599 aaPredicted RBP21.76■■□□□ 1.07
SHANK3-203ENST00000445220 CCDC61Q9Y6R9 512 aa21.76■■□□□ 1.07
SHANK3-203ENST00000445220 CTAGE5O15320 804 aa21.75■■□□□ 1.07
SHANK3-203ENST00000445220 TOM1O60784 492 aa21.75■■□□□ 1.07
SHANK3-203ENST00000445220 NFE2L2Q16236 605 aa21.75■■□□□ 1.07
SHANK3-203ENST00000445220 TAF4BQ92750 862 aa21.75■■□□□ 1.07
SHANK3-203ENST00000445220 FERMT3Q86UX7 667 aa21.75■■□□□ 1.07
SHANK3-203ENST00000445220 CTDP1Q9Y5B0 961 aaPredicted RBP21.75■■□□□ 1.07
SHANK3-203ENST00000445220 CDKL5O76039 1030 aa21.75■■□□□ 1.07
SHANK3-203ENST00000445220 CEBPAP49715 358 aaPredicted RBP21.75■■□□□ 1.07
SHANK3-203ENST00000445220 GTF2A1P52655 376 aaPredicted RBP21.75■■□□□ 1.07
SHANK3-203ENST00000445220 TOP1P11387 765 aaKnown RBP21.75■■□□□ 1.07
SHANK3-203ENST00000445220 TMEM57Q8N5G2 664 aa21.75■■□□□ 1.07
SHANK3-203ENST00000445220 TEX14Q8IWB6 1497 aa21.74■■□□□ 1.07
SHANK3-203ENST00000445220 IMMTQ16891 758 aaKnown RBP21.74■■□□□ 1.07
SHANK3-203ENST00000445220 TBC1D32Q96NH3 1257 aa21.74■■□□□ 1.07
SHANK3-203ENST00000445220 CASTP20810 708 aaKnown RBP21.74■■□□□ 1.07
SHANK3-203ENST00000445220 IBSPP21815 317 aaPredicted RBP21.74■■□□□ 1.07
SHANK3-203ENST00000445220 SPG7Q9UQ90 795 aa21.74■■□□□ 1.07
SHANK3-203ENST00000445220 MAP4K4O95819 1239 aaPredicted RBP21.74■■□□□ 1.07
SHANK3-203ENST00000445220 DDX19AQ9NUU7 478 aaKnown RBP21.73■■□□□ 1.07
SHANK3-203ENST00000445220 EZRP15311 586 aaKnown RBP21.73■■□□□ 1.07
SHANK3-203ENST00000445220 CWC27Q6UX04 472 aaKnown RBP21.73■■□□□ 1.07
SHANK3-203ENST00000445220 TANGO6Q9C0B7 1094 aa21.73■■□□□ 1.07
SHANK3-203ENST00000445220 RNF187Q5TA31 235 aaPredicted RBP21.73■■□□□ 1.07
SHANK3-203ENST00000445220 CEP135Q66GS9 1140 aa21.73■■□□□ 1.07
SHANK3-203ENST00000445220 CCDC94Q9BW85 323 aaPredicted RBP21.73■■□□□ 1.07
SHANK3-203ENST00000445220 ABCC11Q96J66 1382 aa21.73■■□□□ 1.07
SHANK3-203ENST00000445220 ANKRD62A6NC57 917 aa21.73■■□□□ 1.07
SHANK3-203ENST00000445220 TMPOP42166 694 aaKnown RBP21.73■■□□□ 1.07
SHANK3-203ENST00000445220 ZSCAN23Q3MJ62 389 aa21.73■■□□□ 1.07
SHANK3-203ENST00000445220 SLC26A8Q96RN1 970 aa21.73■■□□□ 1.07
SHANK3-203ENST00000445220 CCDC83Q8IWF9 413 aa21.72■■□□□ 1.07
SHANK3-203ENST00000445220 EIF5P55010 431 aaKnown RBP21.72■■□□□ 1.07
SHANK3-203ENST00000445220 SH2B1Q9NRF2 756 aaPredicted RBP21.72■■□□□ 1.07
SHANK3-203ENST00000445220 NOL7Q9UMY1 257 aaKnown RBP21.72■■□□□ 1.07
SHANK3-203ENST00000445220 PEG3Q9GZU2 1588 aa21.72■■□□□ 1.07
SHANK3-203ENST00000445220 NOLC1Q14978 699 aaKnown RBP eCLIP21.72■■□□□ 1.073e-8■□□□□ 8.2
SHANK3-203ENST00000445220 TICAM2Q86XR7 235 aa21.72■■□□□ 1.07
SHANK3-203ENST00000445220 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.72■■□□□ 1.079e-7■■■□□ 16.3
SHANK3-203ENST00000445220 SNW1Q13573 536 aaKnown RBP21.72■■□□□ 1.07
SHANK3-203ENST00000445220 LRSAM1Q6UWE0 723 aa21.72■■□□□ 1.07
SHANK3-203ENST00000445220 ZKSCAN5Q9Y2L8 839 aa21.72■■□□□ 1.07
SHANK3-203ENST00000445220 MNAT1P51948 309 aa21.71■■□□□ 1.07
SHANK3-203ENST00000445220 DNAAF4Q8WXU2 420 aa21.71■■□□□ 1.07
SHANK3-203ENST00000445220 NCOA1Q15788 1441 aa21.71■■□□□ 1.07
SHANK3-203ENST00000445220 MAP2K1Q02750 393 aaPredicted RBP21.71■■□□□ 1.07
SHANK3-203ENST00000445220 PANK2Q9BZ23 570 aa21.71■■□□□ 1.07
SHANK3-203ENST00000445220 FYB1O15117 783 aa21.71■■□□□ 1.07
SHANK3-203ENST00000445220 KRT18P05783 430 aaKnown RBP21.71■■□□□ 1.07
SHANK3-203ENST00000445220 GOLGA6L9A6NEM1 432 aa21.7■■□□□ 1.06
SHANK3-203ENST00000445220 CCDC158Q5M9N0 1113 aa21.7■■□□□ 1.06
SHANK3-203ENST00000445220 NUDT16Q96DE0 195 aaKnown RBP21.7■■□□□ 1.06
SHANK3-203ENST00000445220 HS1BP3Q53T59 392 aa21.69■■□□□ 1.06
SHANK3-203ENST00000445220 CCDC171Q6TFL3 1326 aa21.69■■□□□ 1.06
SHANK3-203ENST00000445220 CAVIN2O95810 425 aa21.69■■□□□ 1.06
SHANK3-203ENST00000445220 IVLP07476 585 aa21.69■■□□□ 1.06
SHANK3-203ENST00000445220 CABP4P57796 275 aa21.68■■□□□ 1.06
SHANK3-203ENST00000445220 CKAP2LQ8IYA6 745 aa21.68■■□□□ 1.06
SHANK3-203ENST00000445220 ZNF397Q8NF99 534 aaPredicted RBP21.68■■□□□ 1.06
SHANK3-203ENST00000445220 RARSP54136 660 aaKnown RBP21.67■■□□□ 1.06
SHANK3-203ENST00000445220 SPA17Q15506 151 aa21.67■■□□□ 1.06
SHANK3-203ENST00000445220 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.67■■□□□ 1.06
SHANK3-203ENST00000445220 DHX29Q7Z478 1369 aaKnown RBP21.67■■□□□ 1.06
SHANK3-203ENST00000445220 SMAP1Q8IYB5 467 aaPredicted RBP21.67■■□□□ 1.06
SHANK3-203ENST00000445220 RBM27Q9P2N5 1060 aaKnown RBP21.67■■□□□ 1.06
SHANK3-203ENST00000445220 RPRD2Q5VT52 1461 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms