RNA–Protein interactions for RNA: ENST00000445089.5

VPS8-209, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-209ENST00000445089 SOBPA7XYQ1 873 aa9.85□□□□□ -0.83
VPS8-209ENST00000445089 M0R2N6 131 aa9.85□□□□□ -0.83
VPS8-209ENST00000445089 DKK1O94907 266 aa9.85□□□□□ -0.83
VPS8-209ENST00000445089 SMTNP53814 917 aa9.85□□□□□ -0.83
VPS8-209ENST00000445089 SRPK2P78362 688 aaKnown RBP9.85□□□□□ -0.83
VPS8-209ENST00000445089 LARP1Q6PKG0 1096 aaKnown RBP9.85□□□□□ -0.83
VPS8-209ENST00000445089 NPAS3Q8IXF0 933 aa9.85□□□□□ -0.83
VPS8-209ENST00000445089 TPCN2Q8NHX9 752 aa9.85□□□□□ -0.83
VPS8-209ENST00000445089 PTK7Q13308 1070 aa9.84□□□□□ -0.83
VPS8-209ENST00000445089 MTFR1Q15390 333 aa9.84□□□□□ -0.83
VPS8-209ENST00000445089 TLR1Q15399 786 aa9.84□□□□□ -0.83
VPS8-209ENST00000445089 ZSCAN10Q96SZ4 725 aaPredicted RBP9.84□□□□□ -0.83
VPS8-209ENST00000445089 ZNF358Q9NW07 568 aa9.84□□□□□ -0.83
VPS8-209ENST00000445089 USP17L15C9J2P7 530 aa9.83□□□□□ -0.84
VPS8-209ENST00000445089 USP17L10C9JJH3 530 aa9.83□□□□□ -0.84
VPS8-209ENST00000445089 USP17L13C9JLJ4 530 aa9.83□□□□□ -0.84
VPS8-209ENST00000445089 USP17L12C9JPN9 530 aa9.83□□□□□ -0.84
VPS8-209ENST00000445089 USP17L11C9JVI0 530 aa9.83□□□□□ -0.84
VPS8-209ENST00000445089 USP17L21D6R901 530 aa9.83□□□□□ -0.84
VPS8-209ENST00000445089 USP17L18D6R9N7 530 aa9.83□□□□□ -0.84
VPS8-209ENST00000445089 USP17L22D6RA61 530 aa9.83□□□□□ -0.84
VPS8-209ENST00000445089 USP17L17D6RBQ6 530 aa9.83□□□□□ -0.84
VPS8-209ENST00000445089 USP17L19D6RCP7 530 aa9.83□□□□□ -0.84
VPS8-209ENST00000445089 USP17L20D6RJB6 530 aa9.83□□□□□ -0.84
VPS8-209ENST00000445089 USP17L24Q0WX57 530 aa9.83□□□□□ -0.84
VPS8-209ENST00000445089 CRTC2Q53ET0 693 aaPredicted RBP9.83□□□□□ -0.84
VPS8-209ENST00000445089 PPARGC1BQ86YN6 1023 aaKnown RBP9.83□□□□□ -0.84
VPS8-209ENST00000445089 RBM19Q9Y4C8 960 aaKnown RBP9.83□□□□□ -0.84
VPS8-209ENST00000445089 GTF2E1P29083 439 aaPredicted RBP9.82□□□□□ -0.84
VPS8-209ENST00000445089 PTSQ03393 145 aa9.82□□□□□ -0.84
VPS8-209ENST00000445089 PRICKLE2Q7Z3G6 844 aa9.82□□□□□ -0.84
VPS8-209ENST00000445089 PBXIP1Q96AQ6 731 aa9.82□□□□□ -0.84
VPS8-209ENST00000445089 ZNF594Q96JF6 807 aaPredicted RBP9.82□□□□□ -0.84
VPS8-209ENST00000445089 NXF1Q9UBU9 619 aaKnown RBP9.82□□□□□ -0.84
VPS8-209ENST00000445089 A6NJY4 79 aa9.81□□□□□ -0.84
VPS8-209ENST00000445089 CDK2AP1O14519 115 aa9.81□□□□□ -0.84
VPS8-209ENST00000445089 RFX1P22670 979 aa9.81□□□□□ -0.84
VPS8-209ENST00000445089 GNASQ5JWF2 1037 aa9.81□□□□□ -0.84
VPS8-209ENST00000445089 NBPF10Q6P3W6 841 aaKnown RBP9.81□□□□□ -0.84
VPS8-209ENST00000445089 NBPF15Q8N660 670 aa9.81□□□□□ -0.84
VPS8-209ENST00000445089 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.81□□□□□ -0.84
VPS8-209ENST00000445089 SLC35F4A4IF30 521 aa9.8□□□□□ -0.84
VPS8-209ENST00000445089 EPHA4P54764 986 aa9.8□□□□□ -0.84
VPS8-209ENST00000445089 SEC13P55735 322 aa9.8□□□□□ -0.84
VPS8-209ENST00000445089 ELOAQ14241 798 aaKnown RBP9.8□□□□□ -0.84
VPS8-209ENST00000445089 TMEM214Q6NUQ4 689 aaKnown RBP9.8□□□□□ -0.84
VPS8-209ENST00000445089 TAS1R3Q7RTX0 852 aa9.8□□□□□ -0.84
VPS8-209ENST00000445089 RHBDD1Q8TEB9 315 aa9.8□□□□□ -0.84
VPS8-209ENST00000445089 SERTAD1Q9UHV2 236 aa9.8□□□□□ -0.84
VPS8-209ENST00000445089 SENP3-EIF4A1A0A087X0R7 540 aa9.79□□□□□ -0.84
VPS8-209ENST00000445089 SUPT5HO00267 1087 aaKnown RBP9.79□□□□□ -0.84
VPS8-209ENST00000445089 POU4F2Q12837 409 aa9.79□□□□□ -0.84
VPS8-209ENST00000445089 ANKMY2Q8IV38 441 aa9.79□□□□□ -0.84
VPS8-209ENST00000445089 SCHIP1Q9P0W5 487 aaPredicted RBP9.79□□□□□ -0.84
VPS8-209ENST00000445089 IQSEC3Q9UPP2 1182 aaPredicted RBP9.79□□□□□ -0.84
VPS8-209ENST00000445089 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.78□□□□□ -0.84
VPS8-209ENST00000445089 TERTO14746 1132 aaKnown RBP9.78□□□□□ -0.84
VPS8-209ENST00000445089 PPP1R15AO75807 674 aaPredicted RBP9.78□□□□□ -0.84
VPS8-209ENST00000445089 ATG7O95352 703 aa9.78□□□□□ -0.84
VPS8-209ENST00000445089 FOXK2Q01167 660 aa9.78□□□□□ -0.84
VPS8-209ENST00000445089 ARXQ96QS3 562 aa9.78□□□□□ -0.84
VPS8-209ENST00000445089 DYRK1BQ9Y463 629 aa9.78□□□□□ -0.84
VPS8-209ENST00000445089 DPYDQ12882 1025 aa9.77□□□□□ -0.85
VPS8-209ENST00000445089 ZNF295-AS1Q8N0V1 137 aa9.77□□□□□ -0.85
VPS8-209ENST00000445089 CCDC155Q8N6L0 562 aa9.77□□□□□ -0.85
VPS8-209ENST00000445089 ZNF775Q96BV0 537 aaPredicted RBP9.77□□□□□ -0.85
VPS8-209ENST00000445089 NIFKQ9BYG3 293 aaKnown RBP9.77□□□□□ -0.85
VPS8-209ENST00000445089 SFI1A8K8P3 1242 aa9.76□□□□□ -0.85
VPS8-209ENST00000445089 H3BM21 787 aa9.76□□□□□ -0.85
VPS8-209ENST00000445089 RHOQP17081 205 aa9.76□□□□□ -0.85
VPS8-209ENST00000445089 C4orf17Q53FE4 359 aa9.76□□□□□ -0.85
VPS8-209ENST00000445089 A0A1B0GTH6 734 aa9.75□□□□□ -0.85
VPS8-209ENST00000445089 PPFIA3O75145 1194 aa9.75□□□□□ -0.85
VPS8-209ENST00000445089 TNS4Q8IZW8 715 aa9.75□□□□□ -0.85
VPS8-209ENST00000445089 TIMMDC1Q9NPL8 285 aa9.75□□□□□ -0.85
VPS8-209ENST00000445089 NOVA2Q9UNW9 492 aaKnown RBP9.75□□□□□ -0.85
VPS8-209ENST00000445089 CDCA8Q53HL2 280 aa9.74□□□□□ -0.85
VPS8-209ENST00000445089 TSEN2Q8NCE0 465 aaKnown RBP9.74□□□□□ -0.85
VPS8-209ENST00000445089 FAM200AQ8TCP9 573 aa9.74□□□□□ -0.85
VPS8-209ENST00000445089 SLC16A10Q8TF71 515 aa9.74□□□□□ -0.85
VPS8-209ENST00000445089 ITGA6P23229 1130 aa9.73□□□□□ -0.85
VPS8-209ENST00000445089 NFX1Q12986 1120 aaKnown RBP9.73□□□□□ -0.85
VPS8-209ENST00000445089 SLC9A9Q8IVB4 645 aa9.73□□□□□ -0.85
VPS8-209ENST00000445089 C1orf216Q8TAB5 229 aa9.73□□□□□ -0.85
VPS8-209ENST00000445089 GMCL1Q96IK5 515 aa9.73□□□□□ -0.85
VPS8-209ENST00000445089 VSIG8P0DPA2 414 aa9.72□□□□□ -0.85
VPS8-209ENST00000445089 TEAD4Q15561 434 aa9.72□□□□□ -0.85
VPS8-209ENST00000445089 GAS2L2Q8NHY3 880 aa9.72□□□□□ -0.85
VPS8-209ENST00000445089 NANOS1Q8WY41 292 aaKnown RBP9.72□□□□□ -0.85
VPS8-209ENST00000445089 ZMIZ1Q9ULJ6 1067 aa9.72□□□□□ -0.85
VPS8-209ENST00000445089 USP3Q9Y6I4 520 aa9.72□□□□□ -0.85
VPS8-209ENST00000445089 F11P03951 625 aa9.71□□□□□ -0.86
VPS8-209ENST00000445089 SWI5Q1ZZU3 235 aa9.71□□□□□ -0.86
VPS8-209ENST00000445089 POTEAQ6S8J7 498 aa9.71□□□□□ -0.86
VPS8-209ENST00000445089 TREML4Q6UXN2 200 aa9.71□□□□□ -0.86
VPS8-209ENST00000445089 STAG2Q8N3U4 1231 aa9.71□□□□□ -0.86
VPS8-209ENST00000445089 ACIN1Q9UKV3 1341 aaKnown RBP9.71□□□□□ -0.86
VPS8-209ENST00000445089 PHKA2P46019 1235 aa9.7□□□□□ -0.86
VPS8-209ENST00000445089 PLA2G4AP47712 749 aa9.7□□□□□ -0.86
VPS8-209ENST00000445089 HIRAP54198 1017 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms