RNA–Protein interactions for RNA: ENST00000444906.1

SLC4A3-208, Transcript of solute carrier family 4 member 3, humanhuman

TSL 5

Gene SLC4A3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A3-208ENST00000444906 CABP4P57796 275 aa23.2■■□□□ 1.3
SLC4A3-208ENST00000444906 U2SURPO15042 1029 aaKnown RBP23.19■■□□□ 1.3
SLC4A3-208ENST00000444906 COL5A3P25940 1745 aaPredicted RBP23.19■■□□□ 1.3
SLC4A3-208ENST00000444906 MRC1P22897 1456 aa23.18■■□□□ 1.3
SLC4A3-208ENST00000444906 MTHFSDQ2M296 383 aaKnown RBP23.17■■□□□ 1.3
SLC4A3-208ENST00000444906 COL23A1Q86Y22 540 aaPredicted RBP23.17■■□□□ 1.3
SLC4A3-208ENST00000444906 LINC00116Q8NCU8 138 aa23.17■■□□□ 1.3
SLC4A3-208ENST00000444906 CICQ96RK0 1608 aaPredicted RBP23.16■■□□□ 1.3
SLC4A3-208ENST00000444906 ITPK1Q13572 414 aa23.16■■□□□ 1.3
SLC4A3-208ENST00000444906 AK7Q96M32 723 aa23.16■■□□□ 1.3
SLC4A3-208ENST00000444906 ATP6V1AP38606 617 aa23.15■■□□□ 1.3
SLC4A3-208ENST00000444906 FLAD1Q8NFF5 587 aa23.15■■□□□ 1.3
SLC4A3-208ENST00000444906 NFATC2IPQ8NCF5 419 aa23.14■■□□□ 1.29
SLC4A3-208ENST00000444906 ARXQ96QS3 562 aa23.14■■□□□ 1.29
SLC4A3-208ENST00000444906 SLC4A9Q96Q91 983 aa23.13■■□□□ 1.29
SLC4A3-208ENST00000444906 NUDCQ9Y266 331 aa23.13■■□□□ 1.29
SLC4A3-208ENST00000444906 RNMTO43148 476 aaKnown RBP23.12■■□□□ 1.29
SLC4A3-208ENST00000444906 MSH5O43196 834 aa23.12■■□□□ 1.29
SLC4A3-208ENST00000444906 TJP1Q07157 1748 aa23.12■■□□□ 1.29
SLC4A3-208ENST00000444906 AMIGO3Q86WK7 504 aa23.12■■□□□ 1.29
SLC4A3-208ENST00000444906 SLC52A2Q9HAB3 445 aa23.12■■□□□ 1.29
SLC4A3-208ENST00000444906 LGR6Q9HBX8 967 aa23.12■■□□□ 1.29
SLC4A3-208ENST00000444906 MAP3K5Q99683 1374 aa23.12■■□□□ 1.29
SLC4A3-208ENST00000444906 POLD1P28340 1107 aa23.11■■□□□ 1.29
SLC4A3-208ENST00000444906 GAS2L2Q8NHY3 880 aa23.11■■□□□ 1.29
SLC4A3-208ENST00000444906 RBM42Q9BTD8 480 aaKnown RBP23.11■■□□□ 1.29
SLC4A3-208ENST00000444906 FHDC1Q9C0D6 1143 aaPredicted RBP23.11■■□□□ 1.29
SLC4A3-208ENST00000444906 RSPH6AQ9H0K4 717 aa23.11■■□□□ 1.29
SLC4A3-208ENST00000444906 SSFA2P28290 1259 aa23.1■■□□□ 1.29
SLC4A3-208ENST00000444906 SIPA1L3O60292 1781 aaPredicted RBP23.09■■□□□ 1.29
SLC4A3-208ENST00000444906 MYH14Q7Z406 1995 aaKnown RBP23.09■■□□□ 1.29
SLC4A3-208ENST00000444906 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.08■■□□□ 1.29
SLC4A3-208ENST00000444906 GNPATO15228 680 aa23.08■■□□□ 1.29
SLC4A3-208ENST00000444906 PRKAR2BP31323 418 aa23.08■■□□□ 1.29
SLC4A3-208ENST00000444906 SYT17Q9BSW7 474 aa23.08■■□□□ 1.29
SLC4A3-208ENST00000444906 UBR2Q8IWV8 1755 aa23.08■■□□□ 1.29
SLC4A3-208ENST00000444906 CNTNAP4Q9C0A0 1308 aa23.08■■□□□ 1.28
SLC4A3-208ENST00000444906 PHF14O94880 888 aa23.07■■□□□ 1.28
SLC4A3-208ENST00000444906 U2AF1L5P0DN76 240 aaPredicted RBP23.07■■□□□ 1.28
SLC4A3-208ENST00000444906 U2AF1Q01081 240 aaKnown RBP eCLIP23.07■■□□□ 1.28
SLC4A3-208ENST00000444906 PTCD1O75127 700 aaKnown RBP23.06■■□□□ 1.28
SLC4A3-208ENST00000444906 DDX10Q13206 875 aaKnown RBP23.06■■□□□ 1.28
SLC4A3-208ENST00000444906 RC3H1Q5TC82 1133 aaKnown RBP23.06■■□□□ 1.28
SLC4A3-208ENST00000444906 KCPQ6ZWJ8 1503 aa23.06■■□□□ 1.28
SLC4A3-208ENST00000444906 GNAT3A8MTJ3 354 aa23.05■■□□□ 1.28
SLC4A3-208ENST00000444906 MSL1Q68DK7 614 aa23.05■■□□□ 1.28
SLC4A3-208ENST00000444906 SMIM5Q71RC9 77 aa23.05■■□□□ 1.28
SLC4A3-208ENST00000444906 PHACTR3Q96KR7 559 aa23.05■■□□□ 1.28
SLC4A3-208ENST00000444906 FCHSD2O94868 740 aa23.04■■□□□ 1.28
SLC4A3-208ENST00000444906 C4AP0C0L4 1744 aa23.04■■□□□ 1.28
SLC4A3-208ENST00000444906 RALBP1Q15311 655 aa23.03■■□□□ 1.28
SLC4A3-208ENST00000444906 ZEB1P37275 1124 aaPredicted RBP23.02■■□□□ 1.28
SLC4A3-208ENST00000444906 IL17REQ8NFR9 667 aa23.02■■□□□ 1.28
SLC4A3-208ENST00000444906 RTCBQ9Y3I0 505 aaKnown RBP23.02■■□□□ 1.28
SLC4A3-208ENST00000444906 CEMIPQ8WUJ3 1361 aa23.01■■□□□ 1.27
SLC4A3-208ENST00000444906 DCAF8L1A6NGE4 600 aa23.01■■□□□ 1.27
SLC4A3-208ENST00000444906 SLC39A6Q13433 755 aa23.01■■□□□ 1.27
SLC4A3-208ENST00000444906 RPS6KA4O75676 772 aa23■■□□□ 1.27
SLC4A3-208ENST00000444906 ADRA2BP18089 450 aa23■■□□□ 1.27
SLC4A3-208ENST00000444906 TEFQ10587 303 aa22.99■■□□□ 1.27
SLC4A3-208ENST00000444906 DLG5Q8TDM6 1919 aa22.98■■□□□ 1.27
SLC4A3-208ENST00000444906 CRKLP46109 303 aaKnown RBP22.98■■□□□ 1.27
SLC4A3-208ENST00000444906 TRAPPC3LQ5T215 181 aa22.98■■□□□ 1.27
SLC4A3-208ENST00000444906 KLHL34Q8N239 644 aa22.98■■□□□ 1.27
SLC4A3-208ENST00000444906 DNAJC10Q8IXB1 793 aa22.97■■□□□ 1.27
SLC4A3-208ENST00000444906 VSIG10Q8N0Z9 540 aa22.96■■□□□ 1.27
SLC4A3-208ENST00000444906 ARHGEF1Q92888 912 aaKnown RBP22.95■■□□□ 1.26
SLC4A3-208ENST00000444906 MYBBP1AQ9BQG0 1328 aaKnown RBP22.94■■□□□ 1.26
SLC4A3-208ENST00000444906 INTS5Q6P9B9 1019 aaKnown RBP22.94■■□□□ 1.26
SLC4A3-208ENST00000444906 TTC5Q8N0Z6 440 aa22.94■■□□□ 1.26
SLC4A3-208ENST00000444906 CYP19A1P11511 503 aaPredicted RBP22.93■■□□□ 1.26
SLC4A3-208ENST00000444906 ZNF790Q6PG37 636 aa22.93■■□□□ 1.26
SLC4A3-208ENST00000444906 NLGN2Q8NFZ4 835 aa22.93■■□□□ 1.26
SLC4A3-208ENST00000444906 HTATSF1O43719 755 aaKnown RBP22.92■■□□□ 1.26
SLC4A3-208ENST00000444906 RFC4P35249 363 aa22.92■■□□□ 1.26
SLC4A3-208ENST00000444906 RTF1Q92541 710 aaKnown RBP22.92■■□□□ 1.26
SLC4A3-208ENST00000444906 PLEKHF1Q96S99 279 aa22.92■■□□□ 1.26
SLC4A3-208ENST00000444906 CCDC87Q9NVE4 849 aa22.92■■□□□ 1.26
SLC4A3-208ENST00000444906 NEFMP07197 916 aa22.91■■□□□ 1.26
SLC4A3-208ENST00000444906 CD2APQ9Y5K6 639 aa22.91■■□□□ 1.26
SLC4A3-208ENST00000444906 HEG1Q9ULI3 1381 aa22.9■■□□□ 1.26
SLC4A3-208ENST00000444906 KIF13BQ9NQT8 1826 aa22.9■■□□□ 1.26
SLC4A3-208ENST00000444906 GYS1P13807 737 aa22.9■■□□□ 1.26
SLC4A3-208ENST00000444906 NLGN1Q8N2Q7 840 aa22.9■■□□□ 1.26
SLC4A3-208ENST00000444906 ZNF496Q96IT1 587 aaPredicted RBP22.9■■□□□ 1.26
SLC4A3-208ENST00000444906 CHD4Q14839 1912 aa22.9■■□□□ 1.26
SLC4A3-208ENST00000444906 SOS1Q07889 1333 aaPredicted RBP22.89■■□□□ 1.26
SLC4A3-208ENST00000444906 MCM10Q7L590 875 aa22.89■■□□□ 1.25
SLC4A3-208ENST00000444906 PNNQ9H307 717 aaKnown RBP22.89■■□□□ 1.25
SLC4A3-208ENST00000444906 USP42Q9H9J4 1324 aaKnown RBP22.88■■□□□ 1.25
SLC4A3-208ENST00000444906 BTBD11A6QL63 1104 aa22.88■■□□□ 1.25
SLC4A3-208ENST00000444906 MMP10P09238 476 aa22.88■■□□□ 1.25
SLC4A3-208ENST00000444906 DCTN1Q14203 1278 aa22.87■■□□□ 1.25
SLC4A3-208ENST00000444906 FMNL2Q96PY5 1086 aa22.87■■□□□ 1.25
SLC4A3-208ENST00000444906 ZBTB1Q9Y2K1 713 aa22.87■■□□□ 1.25
SLC4A3-208ENST00000444906 MAPK8IP3Q9UPT6 1336 aa22.85■■□□□ 1.25
SLC4A3-208ENST00000444906 STARD3NLO95772 234 aa22.85■■□□□ 1.25
SLC4A3-208ENST00000444906 NFE2L2Q16236 605 aa22.85■■□□□ 1.25
SLC4A3-208ENST00000444906 TEX13AQ9BXU3 409 aaPredicted RBP22.85■■□□□ 1.25
SLC4A3-208ENST00000444906 PRKRIP1Q9H875 184 aaPredicted RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms