RNA–Protein interactions for RNA: ENST00000444490.6

ECM2-204, Transcript of extracellular matrix protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ECM2, Length 2,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM2-204ENST00000444490 TWISTNBQ3B726 338 aaPredicted RBP14.38□□□□□ -0.11
ECM2-204ENST00000444490 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.38□□□□□ -0.11
ECM2-204ENST00000444490 PCDH11XQ9BZA7 1347 aa14.38□□□□□ -0.11
ECM2-204ENST00000444490 PCDH11YQ9BZA8 1340 aa14.38□□□□□ -0.11
ECM2-204ENST00000444490 BTBD11A6QL63 1104 aa14.38□□□□□ -0.11
ECM2-204ENST00000444490 SSH1Q8WYL5 1049 aa14.38□□□□□ -0.11
ECM2-204ENST00000444490 SHANK3Q9BYB0 1731 aa14.37□□□□□ -0.11
ECM2-204ENST00000444490 NWD2Q9ULI1 1742 aa14.37□□□□□ -0.11
ECM2-204ENST00000444490 FNBP4Q8N3X1 1017 aaPredicted RBP14.37□□□□□ -0.11
ECM2-204ENST00000444490 SMC4Q9NTJ3 1288 aa14.37□□□□□ -0.11
ECM2-204ENST00000444490 DISP2A7MBM2 1401 aa14.37□□□□□ -0.11
ECM2-204ENST00000444490 VAMP4O75379 141 aa14.37□□□□□ -0.11
ECM2-204ENST00000444490 EXOC5O00471 708 aa14.36□□□□□ -0.11
ECM2-204ENST00000444490 PANK1Q8TE04 598 aa14.36□□□□□ -0.11
ECM2-204ENST00000444490 CABP4P57796 275 aa14.35□□□□□ -0.11
ECM2-204ENST00000444490 VPS72Q15906 364 aa14.35□□□□□ -0.11
ECM2-204ENST00000444490 FAM182BQ5T319 152 aa14.35□□□□□ -0.11
ECM2-204ENST00000444490 CLUAP1Q96AJ1 413 aa14.35□□□□□ -0.11
ECM2-204ENST00000444490 DCAF5Q96JK2 942 aa14.35□□□□□ -0.11
ECM2-204ENST00000444490 SLC52A2Q9HAB3 445 aa14.35□□□□□ -0.11
ECM2-204ENST00000444490 SCN11AQ9UI33 1791 aa14.35□□□□□ -0.11
ECM2-204ENST00000444490 PRAMEF22A3QJZ6 481 aa14.35□□□□□ -0.11
ECM2-204ENST00000444490 DDB1Q16531 1140 aa14.34□□□□□ -0.11
ECM2-204ENST00000444490 SYTL4Q96C24 671 aaPredicted RBP14.34□□□□□ -0.11
ECM2-204ENST00000444490 WNK3Q9BYP7 1800 aa14.33□□□□□ -0.11
ECM2-204ENST00000444490 ACSBG1Q96GR2 724 aa14.33□□□□□ -0.11
ECM2-204ENST00000444490 COG6Q9Y2V7 657 aa14.33□□□□□ -0.11
ECM2-204ENST00000444490 EIF2S2P20042 333 aaKnown RBP14.33□□□□□ -0.12
ECM2-204ENST00000444490 PDE3AQ14432 1141 aa14.33□□□□□ -0.12
ECM2-204ENST00000444490 MARCH10Q8NA82 808 aaPredicted RBP14.32□□□□□ -0.12
ECM2-204ENST00000444490 HSP90AB1P08238 724 aaKnown RBP14.32□□□□□ -0.12
ECM2-204ENST00000444490 EIF4A1P60842 406 aaKnown RBP14.32□□□□□ -0.12
ECM2-204ENST00000444490 NOB1Q9ULX3 412 aaKnown RBP14.32□□□□□ -0.12
ECM2-204ENST00000444490 SKAP1Q86WV1 359 aa14.31□□□□□ -0.12
ECM2-204ENST00000444490 QTRT2Q9H974 415 aaKnown RBP14.31□□□□□ -0.12
ECM2-204ENST00000444490 THRAP3Q9Y2W1 955 aaKnown RBP14.31□□□□□ -0.12
ECM2-204ENST00000444490 TOGARAM1Q9Y4F4 1720 aa14.31□□□□□ -0.12
ECM2-204ENST00000444490 SIPA1L3O60292 1781 aaPredicted RBP14.3□□□□□ -0.12
ECM2-204ENST00000444490 GJD4Q96KN9 370 aaPredicted RBP14.3□□□□□ -0.12
ECM2-204ENST00000444490 TNS2Q63HR2 1409 aa14.3□□□□□ -0.12
ECM2-204ENST00000444490 KDM3BQ7LBC6 1761 aa14.3□□□□□ -0.12
ECM2-204ENST00000444490 ADAMTS7Q9UKP4 1686 aa14.3□□□□□ -0.12
ECM2-204ENST00000444490 ANXA1P04083 346 aa14.3□□□□□ -0.12
ECM2-204ENST00000444490 CT47B1P0C2W7 299 aaPredicted RBP14.3□□□□□ -0.12
ECM2-204ENST00000444490 RLBP1P12271 317 aa14.3□□□□□ -0.12
ECM2-204ENST00000444490 BARGINQ6ZT62 677 aa14.3□□□□□ -0.12
ECM2-204ENST00000444490 FBXO41Q8TF61 875 aa14.3□□□□□ -0.12
ECM2-204ENST00000444490 PTCD1O75127 700 aaKnown RBP14.29□□□□□ -0.12
ECM2-204ENST00000444490 NKX1-1Q15270 411 aaPredicted RBP14.29□□□□□ -0.12
ECM2-204ENST00000444490 ZNF790Q6PG37 636 aa14.29□□□□□ -0.12
ECM2-204ENST00000444490 PRIM1P49642 420 aaKnown RBP14.29□□□□□ -0.12
ECM2-204ENST00000444490 MRPL50Q8N5N7 158 aaKnown RBP14.29□□□□□ -0.12
ECM2-204ENST00000444490 ZNF496Q96IT1 587 aaPredicted RBP14.29□□□□□ -0.12
ECM2-204ENST00000444490 GLI3P10071 1580 aa14.29□□□□□ -0.12
ECM2-204ENST00000444490 KDM2BQ8NHM5 1336 aa14.29□□□□□ -0.12
ECM2-204ENST00000444490 PIP4K2AP48426 406 aaPredicted RBP14.28□□□□□ -0.12
ECM2-204ENST00000444490 G2E3Q7L622 706 aa14.28□□□□□ -0.12
ECM2-204ENST00000444490 TMOD3Q9NYL9 352 aa14.28□□□□□ -0.12
ECM2-204ENST00000444490 CENPQQ7L2Z9 268 aaPredicted RBP14.28□□□□□ -0.12
ECM2-204ENST00000444490 TTC5Q8N0Z6 440 aa14.28□□□□□ -0.12
ECM2-204ENST00000444490 PIGBQ92521 554 aa14.28□□□□□ -0.12
ECM2-204ENST00000444490 TRPC5Q9UL62 973 aaPredicted RBP14.28□□□□□ -0.12
ECM2-204ENST00000444490 ASAP1Q9ULH1 1129 aa14.28□□□□□ -0.12
ECM2-204ENST00000444490 SLC4A2P04920 1241 aa14.28□□□□□ -0.12
ECM2-204ENST00000444490 HDGFL1Q5TGJ6 251 aa14.28□□□□□ -0.12
ECM2-204ENST00000444490 CDCA7Q9BWT1 371 aaPredicted RBP14.28□□□□□ -0.12
ECM2-204ENST00000444490 ERVV-2B6SEH9 535 aa14.27□□□□□ -0.13
ECM2-204ENST00000444490 KCNQ2O43526 872 aa14.27□□□□□ -0.13
ECM2-204ENST00000444490 TRIM27P14373 513 aa14.27□□□□□ -0.13
ECM2-204ENST00000444490 ZKSCAN2Q63HK3 967 aa14.27□□□□□ -0.13
ECM2-204ENST00000444490 PTF1AQ7RTS3 328 aa14.27□□□□□ -0.13
ECM2-204ENST00000444490 ATRNO75882 1429 aa14.26□□□□□ -0.13
ECM2-204ENST00000444490 ALDH1L2Q3SY69 923 aa14.26□□□□□ -0.13
ECM2-204ENST00000444490 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.26□□□□□ -0.13
ECM2-204ENST00000444490 MRC1P22897 1456 aa14.26□□□□□ -0.13
ECM2-204ENST00000444490 GIGYF1O75420 1035 aaPredicted RBP14.26□□□□□ -0.13
ECM2-204ENST00000444490 FTSJ3Q8IY81 847 aaKnown RBP14.26□□□□□ -0.13
ECM2-204ENST00000444490 SEPT12Q8IYM1 358 aa14.26□□□□□ -0.13
ECM2-204ENST00000444490 BABAM1Q9NWV8 329 aa14.26□□□□□ -0.13
ECM2-204ENST00000444490 DOT1LQ8TEK3 1739 aa14.25□□□□□ -0.13
ECM2-204ENST00000444490 ITGB4P16144 1822 aa14.25□□□□□ -0.13
ECM2-204ENST00000444490 CHPF2Q9P2E5 772 aa14.25□□□□□ -0.13
ECM2-204ENST00000444490 PLEKHG2Q9H7P9 1386 aa14.25□□□□□ -0.13
ECM2-204ENST00000444490 PROSER3Q2NL68 480 aa14.25□□□□□ -0.13
ECM2-204ENST00000444490 DZIP1LQ8IYY4 767 aaKnown RBP14.24□□□□□ -0.13
ECM2-204ENST00000444490 RBM42Q9BTD8 480 aaKnown RBP14.24□□□□□ -0.13
ECM2-204ENST00000444490 USP16Q9Y5T5 823 aa14.24□□□□□ -0.13
ECM2-204ENST00000444490 ATF7IPQ6VMQ6 1270 aa14.24□□□□□ -0.13
ECM2-204ENST00000444490 STK31Q9BXU1 1019 aa14.24□□□□□ -0.13
ECM2-204ENST00000444490 PHAXQ9H814 394 aaKnown RBP14.24□□□□□ -0.13
ECM2-204ENST00000444490 F6X3S4 739 aa14.23□□□□□ -0.13
ECM2-204ENST00000444490 CCDC30Q5VVM6 783 aa14.23□□□□□ -0.13
ECM2-204ENST00000444490 ATG3Q9NT62 314 aa14.23□□□□□ -0.13
ECM2-204ENST00000444490 C5P01031 1676 aa14.23□□□□□ -0.13
ECM2-204ENST00000444490 ZNF428Q96B54 188 aa14.23□□□□□ -0.13
ECM2-204ENST00000444490 FMNL2Q96PY5 1086 aa14.23□□□□□ -0.13
ECM2-204ENST00000444490 KIF16BQ96L93 1317 aa14.22□□□□□ -0.13
ECM2-204ENST00000444490 IGHDP01880 384 aa14.22□□□□□ -0.13
ECM2-204ENST00000444490 EP400Q96L91 3159 aa14.22□□□□□ -0.13
ECM2-204ENST00000444490 MYL6BP14649 208 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms