RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 KDRP35968 1356 aa27.22■■□□□ 1.95
EDEM1-203ENST00000443790 MORC1Q86VD1 984 aa27.21■■□□□ 1.95
EDEM1-203ENST00000443790 ERVV-2B6SEH9 535 aa27.2■■□□□ 1.94
EDEM1-203ENST00000443790 GNPATO15228 680 aa27.2■■□□□ 1.94
EDEM1-203ENST00000443790 HSP90AB1P08238 724 aaKnown RBP27.2■■□□□ 1.94
EDEM1-203ENST00000443790 PLEKHO1Q53GL0 409 aaPredicted RBP27.2■■□□□ 1.94
EDEM1-203ENST00000443790 DCAF5Q96JK2 942 aa27.2■■□□□ 1.94
EDEM1-203ENST00000443790 KDM6AO15550 1401 aaPredicted RBP27.19■■□□□ 1.94
EDEM1-203ENST00000443790 ZNF831Q5JPB2 1677 aa27.19■■□□□ 1.94
EDEM1-203ENST00000443790 AMOTQ4VCS5 1084 aa27.17■■□□□ 1.94
EDEM1-203ENST00000443790 ZNF530Q6P9A1 599 aaPredicted RBP27.17■■□□□ 1.94
EDEM1-203ENST00000443790 AEBP1Q8IUX7 1158 aa27.17■■□□□ 1.94
EDEM1-203ENST00000443790 KNSTRNQ9Y448 316 aa27.17■■□□□ 1.94
EDEM1-203ENST00000443790 C1QTNF8P60827 252 aa27.15■■□□□ 1.94
EDEM1-203ENST00000443790 SLC4A9Q96Q91 983 aa27.15■■□□□ 1.94
EDEM1-203ENST00000443790 COL5A3P25940 1745 aaPredicted RBP27.14■■□□□ 1.94
EDEM1-203ENST00000443790 RBM42Q9BTD8 480 aaKnown RBP27.13■■□□□ 1.93
EDEM1-203ENST00000443790 GIGYF1O75420 1035 aaPredicted RBP27.11■■□□□ 1.93
EDEM1-203ENST00000443790 CABP4P57796 275 aa27.11■■□□□ 1.93
EDEM1-203ENST00000443790 C1orf141Q5JVX7 400 aa27.11■■□□□ 1.93
EDEM1-203ENST00000443790 SULT6B1Q6IMI4 303 aa27.11■■□□□ 1.93
EDEM1-203ENST00000443790 RTCBQ9Y3I0 505 aaKnown RBP27.11■■□□□ 1.93
EDEM1-203ENST00000443790 IL13P35225 146 aa27.1■■□□□ 1.93
EDEM1-203ENST00000443790 AMER1Q5JTC6 1135 aaPredicted RBP27.1■■□□□ 1.93
EDEM1-203ENST00000443790 MTHFSP49914 203 aa27.09■■□□□ 1.93
EDEM1-203ENST00000443790 KIF7Q2M1P5 1343 aa27.09■■□□□ 1.93
EDEM1-203ENST00000443790 CNTNAP4Q9C0A0 1308 aa27.09■■□□□ 1.93
EDEM1-203ENST00000443790 MMP10P09238 476 aa27.08■■□□□ 1.93
EDEM1-203ENST00000443790 RC3H1Q5TC82 1133 aaKnown RBP27.08■■□□□ 1.93
EDEM1-203ENST00000443790 SENP3-EIF4A1A0A087X0R7 540 aa27.07■■□□□ 1.92
EDEM1-203ENST00000443790 TRAPPC3LQ5T215 181 aa27.07■■□□□ 1.92
EDEM1-203ENST00000443790 ATP10DQ9P241 1426 aa27.07■■□□□ 1.92
EDEM1-203ENST00000443790 ADRA2BP18089 450 aa27.06■■□□□ 1.92
EDEM1-203ENST00000443790 CICQ96RK0 1608 aaPredicted RBP27.05■■□□□ 1.92
EDEM1-203ENST00000443790 WWC3Q9ULE0 1092 aa27.05■■□□□ 1.92
EDEM1-203ENST00000443790 KIF13BQ9NQT8 1826 aa27.04■■□□□ 1.92
EDEM1-203ENST00000443790 ARHGEF1Q92888 912 aaKnown RBP27.04■■□□□ 1.92
EDEM1-203ENST00000443790 ADCY9O60503 1353 aa27.04■■□□□ 1.92
EDEM1-203ENST00000443790 SCN11AQ9UI33 1791 aa27.04■■□□□ 1.92
EDEM1-203ENST00000443790 RPS6KA4O75676 772 aa27.03■■□□□ 1.92
EDEM1-203ENST00000443790 C4AP0C0L4 1744 aa27.03■■□□□ 1.92
EDEM1-203ENST00000443790 NLGN1Q8N2Q7 840 aa27.03■■□□□ 1.92
EDEM1-203ENST00000443790 NFATC2IPQ8NCF5 419 aa27.03■■□□□ 1.92
EDEM1-203ENST00000443790 MYH14Q7Z406 1995 aaKnown RBP27.02■■□□□ 1.92
EDEM1-203ENST00000443790 KIAA1551Q9HCM1 1747 aa27.02■■□□□ 1.92
EDEM1-203ENST00000443790 PXDNLA1KZ92 1463 aa27.02■■□□□ 1.92
EDEM1-203ENST00000443790 PTCD1O75127 700 aaKnown RBP27.02■■□□□ 1.92
EDEM1-203ENST00000443790 TJP1Q07157 1748 aa27.02■■□□□ 1.92
EDEM1-203ENST00000443790 C10orf71Q711Q0 1435 aa27.01■■□□□ 1.91
EDEM1-203ENST00000443790 GYS1P13807 737 aa27■■□□□ 1.91
EDEM1-203ENST00000443790 RFC4P35249 363 aa27■■□□□ 1.91
EDEM1-203ENST00000443790 AKAP4Q5JQC9 854 aa26.99■■□□□ 1.91
EDEM1-203ENST00000443790 CRKLP46109 303 aaKnown RBP26.98■■□□□ 1.91
EDEM1-203ENST00000443790 PER1O15534 1290 aaPredicted RBP26.97■■□□□ 1.91
EDEM1-203ENST00000443790 MRC1P22897 1456 aa26.97■■□□□ 1.91
EDEM1-203ENST00000443790 TGFB2P61812 414 aa26.96■■□□□ 1.91
EDEM1-203ENST00000443790 N4BP2Q86UW6 1770 aaPredicted RBP26.96■■□□□ 1.91
EDEM1-203ENST00000443790 HMOX1P09601 288 aa26.95■■□□□ 1.9
EDEM1-203ENST00000443790 GPBP1L1Q9HC44 474 aaPredicted RBP26.95■■□□□ 1.9
EDEM1-203ENST00000443790 CCDC87Q9NVE4 849 aa26.95■■□□□ 1.9
EDEM1-203ENST00000443790 SLC52A2Q9HAB3 445 aa26.94■■□□□ 1.9
EDEM1-203ENST00000443790 CC2D1BQ5T0F9 858 aaKnown RBP26.93■■□□□ 1.9
EDEM1-203ENST00000443790 PARP3Q9Y6F1 533 aa26.93■■□□□ 1.9
EDEM1-203ENST00000443790 LGR6Q9HBX8 967 aa26.92■■□□□ 1.9
EDEM1-203ENST00000443790 ADAMTS7Q9UKP4 1686 aa26.92■■□□□ 1.9
EDEM1-203ENST00000443790 USP42Q9H9J4 1324 aaKnown RBP26.91■■□□□ 1.9
EDEM1-203ENST00000443790 VIRMAQ69YN4 1812 aaKnown RBP26.91■■□□□ 1.9
EDEM1-203ENST00000443790 A0A0G2JLW4 131 aa26.91■■□□□ 1.9
EDEM1-203ENST00000443790 DIAPH1O60610 1272 aaKnown RBP26.91■■□□□ 1.9
EDEM1-203ENST00000443790 RNMTO43148 476 aaKnown RBP26.9■■□□□ 1.9
EDEM1-203ENST00000443790 ZNF526Q8TF50 670 aaPredicted RBP26.9■■□□□ 1.9
EDEM1-203ENST00000443790 SRP68Q9UHB9 627 aaKnown RBP26.9■■□□□ 1.9
EDEM1-203ENST00000443790 MTHFSDQ2M296 383 aaKnown RBP26.89■■□□□ 1.9
EDEM1-203ENST00000443790 INTS5Q6P9B9 1019 aaKnown RBP26.89■■□□□ 1.9
EDEM1-203ENST00000443790 DNAJC10Q8IXB1 793 aa26.89■■□□□ 1.9
EDEM1-203ENST00000443790 BCS1LQ9Y276 419 aa26.89■■□□□ 1.9
EDEM1-203ENST00000443790 BRCA1P38398 1863 aaKnown RBP26.89■■□□□ 1.89
EDEM1-203ENST00000443790 COL3A1P02461 1466 aaPredicted RBP26.88■■□□□ 1.89
EDEM1-203ENST00000443790 NPC1L1Q9UHC9 1359 aa26.88■■□□□ 1.89
EDEM1-203ENST00000443790 DPEP1P16444 411 aa26.88■■□□□ 1.89
EDEM1-203ENST00000443790 KCPQ6ZWJ8 1503 aa26.88■■□□□ 1.89
EDEM1-203ENST00000443790 FKBP8Q14318 412 aa26.87■■□□□ 1.89
EDEM1-203ENST00000443790 SLC39A6Q13433 755 aa26.86■■□□□ 1.89
EDEM1-203ENST00000443790 DDR1Q08345 913 aa26.85■■□□□ 1.89
EDEM1-203ENST00000443790 CEP350Q5VT06 3117 aa26.85■■□□□ 1.89
EDEM1-203ENST00000443790 SOS1Q07889 1333 aaPredicted RBP26.84■■□□□ 1.89
EDEM1-203ENST00000443790 FCHSD2O94868 740 aa26.83■■□□□ 1.89
EDEM1-203ENST00000443790 CYP19A1P11511 503 aaPredicted RBP26.83■■□□□ 1.89
EDEM1-203ENST00000443790 UBR2Q8IWV8 1755 aa26.82■■□□□ 1.88
EDEM1-203ENST00000443790 KCNA3P22001 575 aa26.82■■□□□ 1.88
EDEM1-203ENST00000443790 POLRMTO00411 1230 aaKnown RBP26.8■■□□□ 1.88
EDEM1-203ENST00000443790 ZPR1O75312 459 aa26.8■■□□□ 1.88
EDEM1-203ENST00000443790 USPL1Q5W0Q7 1092 aa26.8■■□□□ 1.88
EDEM1-203ENST00000443790 ARHGAP27Q6ZUM4 889 aa26.8■■□□□ 1.88
EDEM1-203ENST00000443790 ARFGEF1Q9Y6D6 1849 aa26.8■■□□□ 1.88
EDEM1-203ENST00000443790 COL15A1P39059 1388 aa26.8■■□□□ 1.88
EDEM1-203ENST00000443790 TM4SF1P30408 202 aa26.79■■□□□ 1.88
EDEM1-203ENST00000443790 CNGB1Q14028 1251 aaPredicted RBP26.79■■□□□ 1.88
EDEM1-203ENST00000443790 VSIG10Q8N0Z9 540 aa26.79■■□□□ 1.88
EDEM1-203ENST00000443790 ZBTB1Q9Y2K1 713 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms