RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 LZTS3O60299 673 aaPredicted RBP9.73□□□□□ -0.85
VPS50-206ENST00000443443 INHAP05111 366 aa9.73□□□□□ -0.85
VPS50-206ENST00000443443 FOXR1Q6PIV2 292 aa9.73□□□□□ -0.85
VPS50-206ENST00000443443 NFATC2IPQ8NCF5 419 aa9.73□□□□□ -0.85
VPS50-206ENST00000443443 USP17L5A8MUK1 530 aa9.72□□□□□ -0.85
VPS50-206ENST00000443443 H7C1W4 665 aa9.72□□□□□ -0.85
VPS50-206ENST00000443443 SCNN1DP51172 638 aa9.72□□□□□ -0.85
VPS50-206ENST00000443443 DBN1Q16643 649 aa9.72□□□□□ -0.85
VPS50-206ENST00000443443 TRIM22Q8IYM9 498 aa9.72□□□□□ -0.85
VPS50-206ENST00000443443 FHDC1Q9C0D6 1143 aaPredicted RBP9.72□□□□□ -0.85
VPS50-206ENST00000443443 F11P03951 625 aa9.71□□□□□ -0.86
VPS50-206ENST00000443443 GTF2IP78347 998 aa9.71□□□□□ -0.86
VPS50-206ENST00000443443 KRT76Q01546 638 aa9.71□□□□□ -0.86
VPS50-206ENST00000443443 GPAMQ9HCL2 828 aa9.71□□□□□ -0.86
VPS50-206ENST00000443443 C4orf17Q53FE4 359 aa9.7□□□□□ -0.86
VPS50-206ENST00000443443 RNFT1Q5M7Z0 435 aa9.7□□□□□ -0.86
VPS50-206ENST00000443443 TBC1D9Q6ZT07 1266 aa9.7□□□□□ -0.86
VPS50-206ENST00000443443 PPARGC1BQ86YN6 1023 aaKnown RBP9.7□□□□□ -0.86
VPS50-206ENST00000443443 FNBP4Q8N3X1 1017 aaPredicted RBP9.7□□□□□ -0.86
VPS50-206ENST00000443443 GMCL1Q96IK5 515 aa9.7□□□□□ -0.86
VPS50-206ENST00000443443 PCDHGA11Q9Y5H2 935 aa9.7□□□□□ -0.86
VPS50-206ENST00000443443 GPR25O00155 361 aa9.69□□□□□ -0.86
VPS50-206ENST00000443443 SMTNP53814 917 aa9.69□□□□□ -0.86
VPS50-206ENST00000443443 RHBDD1Q8TEB9 315 aa9.69□□□□□ -0.86
VPS50-206ENST00000443443 GLMNQ92990 594 aa9.69□□□□□ -0.86
VPS50-206ENST00000443443 GTPBP3Q969Y2 492 aaKnown RBP9.69□□□□□ -0.86
VPS50-206ENST00000443443 ZNF837Q96EG3 531 aaPredicted RBP9.69□□□□□ -0.86
VPS50-206ENST00000443443 A6NJR5 290 aa9.68□□□□□ -0.86
VPS50-206ENST00000443443 AIDAQ96BJ3 306 aa9.68□□□□□ -0.86
VPS50-206ENST00000443443 CALR3Q96L12 384 aaKnown RBP9.68□□□□□ -0.86
VPS50-206ENST00000443443 A0A1B0GTH6 734 aa9.67□□□□□ -0.86
VPS50-206ENST00000443443 USP17L3A6NCW0 530 aa9.67□□□□□ -0.86
VPS50-206ENST00000443443 USP17L4A6NCW7 530 aa9.67□□□□□ -0.86
VPS50-206ENST00000443443 TMEM229AB2RXF0 380 aa9.67□□□□□ -0.86
VPS50-206ENST00000443443 ATP9BO43861 1147 aa9.67□□□□□ -0.86
VPS50-206ENST00000443443 CSB-PGBD3P0DP91 1061 aa9.67□□□□□ -0.86
VPS50-206ENST00000443443 USP17L2Q6R6M4 530 aa9.67□□□□□ -0.86
VPS50-206ENST00000443443 USP17L1Q7RTZ2 530 aa9.67□□□□□ -0.86
VPS50-206ENST00000443443 TRIM50Q86XT4 487 aa9.67□□□□□ -0.86
VPS50-206ENST00000443443 PGBD3Q8N328 593 aa9.67□□□□□ -0.86
VPS50-206ENST00000443443 TRERF1Q96PN7 1200 aa9.67□□□□□ -0.86
VPS50-206ENST00000443443 UCN2Q96RP3 112 aa9.67□□□□□ -0.86
VPS50-206ENST00000443443 NUCKS1Q9H1E3 243 aaKnown RBP9.67□□□□□ -0.86
VPS50-206ENST00000443443 BACH1O14867 736 aa9.66□□□□□ -0.86
VPS50-206ENST00000443443 PLA2G4AP47712 749 aa9.66□□□□□ -0.86
VPS50-206ENST00000443443 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.66□□□□□ -0.86
VPS50-206ENST00000443443 NIFKQ9BYG3 293 aaKnown RBP9.66□□□□□ -0.86
VPS50-206ENST00000443443 A6NJY4 79 aa9.65□□□□□ -0.86
VPS50-206ENST00000443443 MSX1P28360 303 aa9.65□□□□□ -0.86
VPS50-206ENST00000443443 RUBCNLQ9H714 662 aa9.65□□□□□ -0.86
VPS50-206ENST00000443443 TFIP11Q9UBB9 837 aaKnown RBP9.65□□□□□ -0.86
VPS50-206ENST00000443443 MKRN1Q9UHC7 482 aaKnown RBP9.65□□□□□ -0.86
VPS50-206ENST00000443443 ATP1A2P50993 1020 aa9.64□□□□□ -0.87
VPS50-206ENST00000443443 PLEKHM2Q8IWE5 1019 aa9.64□□□□□ -0.87
VPS50-206ENST00000443443 SLC4A9Q96Q91 983 aa9.64□□□□□ -0.87
VPS50-206ENST00000443443 CABP1Q9NZU7 370 aa9.64□□□□□ -0.87
VPS50-206ENST00000443443 CDK2AP1O14519 115 aa9.63□□□□□ -0.87
VPS50-206ENST00000443443 ZNF358Q9NW07 568 aa9.63□□□□□ -0.87
VPS50-206ENST00000443443 ZNF777Q9ULD5 760 aaPredicted RBP9.63□□□□□ -0.87
VPS50-206ENST00000443443 EFHC2Q5JST6 749 aa9.62□□□□□ -0.87
VPS50-206ENST00000443443 CCDC102BQ68D86 513 aa9.62□□□□□ -0.87
VPS50-206ENST00000443443 OGFOD1Q8N543 542 aa9.62□□□□□ -0.87
VPS50-206ENST00000443443 TPCN2Q8NHX9 752 aa9.62□□□□□ -0.87
VPS50-206ENST00000443443 DNAAF2Q9NVR5 837 aaKnown RBP9.62□□□□□ -0.87
VPS50-206ENST00000443443 RBM19Q9Y4C8 960 aaKnown RBP9.62□□□□□ -0.87
VPS50-206ENST00000443443 ADAMTS2O95450 1211 aa9.61□□□□□ -0.87
VPS50-206ENST00000443443 GAS6Q14393 721 aa9.61□□□□□ -0.87
VPS50-206ENST00000443443 SVOPQ8N4V2 548 aa9.61□□□□□ -0.87
VPS50-206ENST00000443443 ZBTB7BO15156 539 aaPredicted RBP9.6□□□□□ -0.87
VPS50-206ENST00000443443 CLDN10P78369 228 aa9.6□□□□□ -0.87
VPS50-206ENST00000443443 SRSF11Q05519 484 aaKnown RBP9.6□□□□□ -0.87
VPS50-206ENST00000443443 ARSJQ5FYB0 599 aaPredicted RBP9.6□□□□□ -0.87
VPS50-206ENST00000443443 TNS4Q8IZW8 715 aa9.6□□□□□ -0.87
VPS50-206ENST00000443443 MBIPQ9NS73 344 aa9.6□□□□□ -0.87
VPS50-206ENST00000443443 PARP3Q9Y6F1 533 aa9.6□□□□□ -0.87
VPS50-206ENST00000443443 PALM3A6NDB9 673 aaPredicted RBP9.59□□□□□ -0.87
VPS50-206ENST00000443443 MX2P20592 715 aa9.59□□□□□ -0.87
VPS50-206ENST00000443443 MTFR1Q15390 333 aa9.59□□□□□ -0.87
VPS50-206ENST00000443443 NBPF1Q3BBV0 1214 aa9.59□□□□□ -0.87
VPS50-206ENST00000443443 WHAMMQ8TF30 809 aa9.59□□□□□ -0.87
VPS50-206ENST00000443443 ZNF594Q96JF6 807 aaPredicted RBP9.59□□□□□ -0.87
VPS50-206ENST00000443443 PHF24Q9UPV7 400 aa9.59□□□□□ -0.87
VPS50-206ENST00000443443 KIAA1024Q9UPX6 916 aa9.59□□□□□ -0.87
VPS50-206ENST00000443443 USP3Q9Y6I4 520 aa9.59□□□□□ -0.87
VPS50-206ENST00000443443 SLURP2P0DP57 97 aa9.58□□□□□ -0.88
VPS50-206ENST00000443443 RASA1P20936 1047 aa9.58□□□□□ -0.88
VPS50-206ENST00000443443 TBCELQ5QJ74 424 aa9.58□□□□□ -0.88
VPS50-206ENST00000443443 LARGE2Q8N3Y3 721 aa9.58□□□□□ -0.88
VPS50-206ENST00000443443 PPP1R12CQ9BZL4 782 aa9.58□□□□□ -0.88
VPS50-206ENST00000443443 SCHIP1Q9P0W5 487 aaPredicted RBP9.58□□□□□ -0.88
VPS50-206ENST00000443443 NSFL1CQ9UNZ2 370 aaKnown RBP9.58□□□□□ -0.88
VPS50-206ENST00000443443 IQSEC3Q9UPP2 1182 aaPredicted RBP9.58□□□□□ -0.88
VPS50-206ENST00000443443 MAFBQ9Y5Q3 323 aaPredicted RBP9.58□□□□□ -0.88
VPS50-206ENST00000443443 TATP17735 454 aaPredicted RBP9.57□□□□□ -0.88
VPS50-206ENST00000443443 LMOD1P29536 600 aaPredicted RBP9.57□□□□□ -0.88
VPS50-206ENST00000443443 LBRQ14739 615 aaKnown RBP9.57□□□□□ -0.88
VPS50-206ENST00000443443 ZNF385CQ66K41 422 aaPredicted RBP9.57□□□□□ -0.88
VPS50-206ENST00000443443 ZNF232Q9UNY5 417 aa9.57□□□□□ -0.88
VPS50-206ENST00000443443 IGF1RP08069 1367 aa9.57□□□□□ -0.88
VPS50-206ENST00000443443 THBS1P07996 1170 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms