RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 IFNL2Q8IZJ0 200 aa28.84■■■□□ 2.21
POLR2J3-202ENST00000443430 ATG3Q9NT62 314 aa28.84■■■□□ 2.21
POLR2J3-202ENST00000443430 KIF13BQ9NQT8 1826 aa28.83■■■□□ 2.21
POLR2J3-202ENST00000443430 KIAA1551Q9HCM1 1747 aa28.81■■■□□ 2.2
POLR2J3-202ENST00000443430 PXDNLA1KZ92 1463 aa28.81■■■□□ 2.2
POLR2J3-202ENST00000443430 POLKQ9UBT6 870 aa28.79■■■□□ 2.2
POLR2J3-202ENST00000443430 N4BP2Q86UW6 1770 aaPredicted RBP28.79■■■□□ 2.2
POLR2J3-202ENST00000443430 TGFB2P61812 414 aa28.78■■■□□ 2.2
POLR2J3-202ENST00000443430 TRAPPC3LQ5T215 181 aa28.77■■■□□ 2.2
POLR2J3-202ENST00000443430 SLC4A9Q96Q91 983 aa28.77■■■□□ 2.2
POLR2J3-202ENST00000443430 KDRP35968 1356 aa28.76■■■□□ 2.2
POLR2J3-202ENST00000443430 NLGN1Q8N2Q7 840 aa28.76■■■□□ 2.19
POLR2J3-202ENST00000443430 RTCBQ9Y3I0 505 aaKnown RBP28.76■■■□□ 2.19
POLR2J3-202ENST00000443430 A0A0G2JLW4 131 aa28.75■■■□□ 2.19
POLR2J3-202ENST00000443430 BCS1LQ9Y276 419 aa28.75■■■□□ 2.19
POLR2J3-202ENST00000443430 EIF4A2Q14240 407 aaKnown RBP28.74■■■□□ 2.19
POLR2J3-202ENST00000443430 C10orf71Q711Q0 1435 aa28.73■■■□□ 2.19
POLR2J3-202ENST00000443430 ARHGEF1Q92888 912 aaKnown RBP28.73■■■□□ 2.19
POLR2J3-202ENST00000443430 ZNF831Q5JPB2 1677 aa28.73■■■□□ 2.19
POLR2J3-202ENST00000443430 ERVV-2B6SEH9 535 aa28.71■■■□□ 2.19
POLR2J3-202ENST00000443430 APLP1P51693 650 aa28.71■■■□□ 2.19
POLR2J3-202ENST00000443430 RC3H1Q5TC82 1133 aaKnown RBP28.71■■■□□ 2.19
POLR2J3-202ENST00000443430 RBM42Q9BTD8 480 aaKnown RBP28.71■■■□□ 2.19
POLR2J3-202ENST00000443430 PLEKHG2Q9H7P9 1386 aa28.71■■■□□ 2.19
POLR2J3-202ENST00000443430 TOMM70O94826 608 aa28.7■■■□□ 2.18
POLR2J3-202ENST00000443430 DPEP1P16444 411 aa28.7■■■□□ 2.18
POLR2J3-202ENST00000443430 ADRA2BP18089 450 aa28.7■■■□□ 2.18
POLR2J3-202ENST00000443430 ARHGAP27Q6ZUM4 889 aa28.7■■■□□ 2.18
POLR2J3-202ENST00000443430 COL5A3P25940 1745 aaPredicted RBP28.69■■■□□ 2.18
POLR2J3-202ENST00000443430 GYS1P13807 737 aa28.69■■■□□ 2.18
POLR2J3-202ENST00000443430 CCDC87Q9NVE4 849 aa28.69■■■□□ 2.18
POLR2J3-202ENST00000443430 BRCA1P38398 1863 aaKnown RBP28.69■■■□□ 2.18
POLR2J3-202ENST00000443430 MYH14Q7Z406 1995 aaKnown RBP28.69■■■□□ 2.18
POLR2J3-202ENST00000443430 C4AP0C0L4 1744 aa28.69■■■□□ 2.18
POLR2J3-202ENST00000443430 CNTNAP4Q9C0A0 1308 aa28.69■■■□□ 2.18
POLR2J3-202ENST00000443430 RPS6KA4O75676 772 aa28.67■■■□□ 2.18
POLR2J3-202ENST00000443430 DCAF5Q96JK2 942 aa28.67■■■□□ 2.18
POLR2J3-202ENST00000443430 FCHSD2O94868 740 aa28.66■■■□□ 2.18
POLR2J3-202ENST00000443430 RFC4P35249 363 aa28.66■■■□□ 2.18
POLR2J3-202ENST00000443430 TNNT2P45379 298 aaPredicted RBP28.66■■■□□ 2.18
POLR2J3-202ENST00000443430 DNAJC5GQ8N7S2 189 aa28.66■■■□□ 2.18
POLR2J3-202ENST00000443430 NMRK2Q9NPI5 230 aa28.66■■■□□ 2.18
POLR2J3-202ENST00000443430 HSP90AB1P08238 724 aaKnown RBP28.65■■■□□ 2.18
POLR2J3-202ENST00000443430 PARP3Q9Y6F1 533 aa28.65■■■□□ 2.18
POLR2J3-202ENST00000443430 KCNA3P22001 575 aa28.64■■■□□ 2.18
POLR2J3-202ENST00000443430 KDM6AO15550 1401 aaPredicted RBP28.63■■■□□ 2.17
POLR2J3-202ENST00000443430 PLEKHO1Q53GL0 409 aaPredicted RBP28.62■■■□□ 2.17
POLR2J3-202ENST00000443430 ARFGEF1Q9Y6D6 1849 aa28.62■■■□□ 2.17
POLR2J3-202ENST00000443430 CABP4P57796 275 aa28.6■■■□□ 2.17
POLR2J3-202ENST00000443430 C9orf131Q5VYM1 1079 aa28.59■■■□□ 2.17
POLR2J3-202ENST00000443430 ZNF530Q6P9A1 599 aaPredicted RBP28.59■■■□□ 2.17
POLR2J3-202ENST00000443430 AMOTQ4VCS5 1084 aa28.57■■■□□ 2.16
POLR2J3-202ENST00000443430 POLR3GLQ9BT43 218 aa28.57■■■□□ 2.16
POLR2J3-202ENST00000443430 PIM2Q9P1W9 311 aa28.57■■■□□ 2.16
POLR2J3-202ENST00000443430 PTCD1O75127 700 aaKnown RBP28.56■■■□□ 2.16
POLR2J3-202ENST00000443430 CRKLP46109 303 aaKnown RBP28.56■■■□□ 2.16
POLR2J3-202ENST00000443430 RBM46Q8TBY0 533 aaKnown RBP28.56■■■□□ 2.16
POLR2J3-202ENST00000443430 SRP68Q9UHB9 627 aaKnown RBP28.56■■■□□ 2.16
POLR2J3-202ENST00000443430 MTHFSP49914 203 aa28.55■■■□□ 2.16
POLR2J3-202ENST00000443430 DDR1Q08345 913 aa28.54■■■□□ 2.16
POLR2J3-202ENST00000443430 FKBP8Q14318 412 aa28.54■■■□□ 2.16
POLR2J3-202ENST00000443430 WDR90Q96KV7 1748 aa28.54■■■□□ 2.16
POLR2J3-202ENST00000443430 USP42Q9H9J4 1324 aaKnown RBP28.53■■■□□ 2.16
POLR2J3-202ENST00000443430 DALRD3Q5D0E6 543 aaKnown RBP28.53■■■□□ 2.16
POLR2J3-202ENST00000443430 AEBP1Q8IUX7 1158 aa28.53■■■□□ 2.16
POLR2J3-202ENST00000443430 NFATC2IPQ8NCF5 419 aa28.53■■■□□ 2.16
POLR2J3-202ENST00000443430 C16orf71Q8IYS4 520 aaPredicted RBP28.51■■■□□ 2.15
POLR2J3-202ENST00000443430 TJP1Q07157 1748 aa28.5■■■□□ 2.15
POLR2J3-202ENST00000443430 C1orf141Q5JVX7 400 aa28.5■■■□□ 2.15
POLR2J3-202ENST00000443430 KCPQ6ZWJ8 1503 aa28.49■■■□□ 2.15
POLR2J3-202ENST00000443430 SBF1O95248 1867 aa28.49■■■□□ 2.15
POLR2J3-202ENST00000443430 HTRA3P83110 453 aa28.49■■■□□ 2.15
POLR2J3-202ENST00000443430 TIMELESSQ9UNS1 1208 aa28.49■■■□□ 2.15
POLR2J3-202ENST00000443430 CHRNA5P30532 468 aa28.48■■■□□ 2.15
POLR2J3-202ENST00000443430 INTS5Q6P9B9 1019 aaKnown RBP28.48■■■□□ 2.15
POLR2J3-202ENST00000443430 PANK3Q9H999 370 aa28.48■■■□□ 2.15
POLR2J3-202ENST00000443430 RNF181Q9P0P0 153 aa28.48■■■□□ 2.15
POLR2J3-202ENST00000443430 KDM2BQ8NHM5 1336 aa28.47■■■□□ 2.15
POLR2J3-202ENST00000443430 FSTL1Q12841 308 aa28.47■■■□□ 2.15
POLR2J3-202ENST00000443430 ADAMTS7Q9UKP4 1686 aa28.46■■■□□ 2.15
POLR2J3-202ENST00000443430 POLRMTO00411 1230 aaKnown RBP28.46■■■□□ 2.15
POLR2J3-202ENST00000443430 TM4SF1P30408 202 aa28.46■■■□□ 2.15
POLR2J3-202ENST00000443430 KLRG1Q96E93 195 aa28.46■■■□□ 2.15
POLR2J3-202ENST00000443430 SULT6B1Q6IMI4 303 aa28.45■■■□□ 2.14
POLR2J3-202ENST00000443430 RRAGCQ9HB90 399 aa28.45■■■□□ 2.14
POLR2J3-202ENST00000443430 SCN11AQ9UI33 1791 aa28.45■■■□□ 2.14
POLR2J3-202ENST00000443430 JMYQ8N9B5 988 aa28.43■■■□□ 2.14
POLR2J3-202ENST00000443430 USPL1Q5W0Q7 1092 aa28.41■■■□□ 2.14
POLR2J3-202ENST00000443430 MORC1Q86VD1 984 aa28.41■■■□□ 2.14
POLR2J3-202ENST00000443430 DNAJC10Q8IXB1 793 aa28.41■■■□□ 2.14
POLR2J3-202ENST00000443430 TNRC6CQ9HCJ0 1690 aaKnown RBP28.41■■■□□ 2.14
POLR2J3-202ENST00000443430 ZPR1O75312 459 aa28.4■■■□□ 2.14
POLR2J3-202ENST00000443430 IL13P35225 146 aa28.39■■■□□ 2.14
POLR2J3-202ENST00000443430 SOS1Q07889 1333 aaPredicted RBP28.39■■■□□ 2.13
POLR2J3-202ENST00000443430 AFDNP55196 1824 aaKnown RBP28.39■■■□□ 2.13
POLR2J3-202ENST00000443430 TRIM26Q12899 539 aaPredicted RBP28.38■■■□□ 2.13
POLR2J3-202ENST00000443430 COL13A1Q5TAT6 717 aaPredicted RBP28.37■■■□□ 2.13
POLR2J3-202ENST00000443430 RASSF7Q02833 373 aa28.36■■■□□ 2.13
POLR2J3-202ENST00000443430 AKAP4Q5JQC9 854 aa28.36■■■□□ 2.13
POLR2J3-202ENST00000443430 SLC52A2Q9HAB3 445 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms