RNA–Protein interactions for RNA: ENST00000443218.1

ODC1-203, Transcript of ornithine decarboxylase 1, humanhuman

TSL 2

Gene ODC1, Length 494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ODC1-203ENST00000443218 PHKG2P15735 406 aa22.77■■□□□ 1.24
ODC1-203ENST00000443218 ATP6V1AP38606 617 aa22.77■■□□□ 1.24
ODC1-203ENST00000443218 SLC4A9Q96Q91 983 aa22.77■■□□□ 1.24
ODC1-203ENST00000443218 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.77■■□□□ 1.24
ODC1-203ENST00000443218 MMP10P09238 476 aa22.76■■□□□ 1.23
ODC1-203ENST00000443218 KDRP35968 1356 aa22.76■■□□□ 1.23
ODC1-203ENST00000443218 POLKQ9UBT6 870 aa22.75■■□□□ 1.23
ODC1-203ENST00000443218 CDCA8Q53HL2 280 aa22.74■■□□□ 1.23
ODC1-203ENST00000443218 IFNL2Q8IZJ0 200 aa22.74■■□□□ 1.23
ODC1-203ENST00000443218 COL5A3P25940 1745 aaPredicted RBP22.71■■□□□ 1.23
ODC1-203ENST00000443218 C10orf71Q711Q0 1435 aa22.71■■□□□ 1.23
ODC1-203ENST00000443218 ZNF831Q5JPB2 1677 aa22.71■■□□□ 1.23
ODC1-203ENST00000443218 A0A0G2JLW4 131 aa22.7■■□□□ 1.22
ODC1-203ENST00000443218 EIF4A2Q14240 407 aaKnown RBP22.7■■□□□ 1.22
ODC1-203ENST00000443218 BRCA1P38398 1863 aaKnown RBP22.69■■□□□ 1.22
ODC1-203ENST00000443218 ARHGEF1Q92888 912 aaKnown RBP22.68■■□□□ 1.22
ODC1-203ENST00000443218 C4AP0C0L4 1744 aa22.68■■□□□ 1.22
ODC1-203ENST00000443218 MYH14Q7Z406 1995 aaKnown RBP22.67■■□□□ 1.22
ODC1-203ENST00000443218 TGFB2P61812 414 aa22.67■■□□□ 1.22
ODC1-203ENST00000443218 TRAPPC3LQ5T215 181 aa22.67■■□□□ 1.22
ODC1-203ENST00000443218 BCS1LQ9Y276 419 aa22.67■■□□□ 1.22
ODC1-203ENST00000443218 RTCBQ9Y3I0 505 aaKnown RBP22.67■■□□□ 1.22
ODC1-203ENST00000443218 GYS1P13807 737 aa22.66■■□□□ 1.22
ODC1-203ENST00000443218 DPEP1P16444 411 aa22.66■■□□□ 1.22
ODC1-203ENST00000443218 KDM6AO15550 1401 aaPredicted RBP22.65■■□□□ 1.22
ODC1-203ENST00000443218 KCNA3P22001 575 aa22.65■■□□□ 1.22
ODC1-203ENST00000443218 NLGN1Q8N2Q7 840 aa22.65■■□□□ 1.22
ODC1-203ENST00000443218 DNAJC5GQ8N7S2 189 aa22.65■■□□□ 1.22
ODC1-203ENST00000443218 RBM42Q9BTD8 480 aaKnown RBP22.65■■□□□ 1.22
ODC1-203ENST00000443218 TNNT2P45379 298 aaPredicted RBP22.64■■□□□ 1.21
ODC1-203ENST00000443218 RC3H1Q5TC82 1133 aaKnown RBP22.64■■□□□ 1.21
ODC1-203ENST00000443218 NMRK2Q9NPI5 230 aa22.64■■□□□ 1.21
ODC1-203ENST00000443218 CNTNAP4Q9C0A0 1308 aa22.63■■□□□ 1.21
ODC1-203ENST00000443218 ERVV-2B6SEH9 535 aa22.63■■□□□ 1.21
ODC1-203ENST00000443218 ARHGAP27Q6ZUM4 889 aa22.63■■□□□ 1.21
ODC1-203ENST00000443218 PLEKHG2Q9H7P9 1386 aa22.63■■□□□ 1.21
ODC1-203ENST00000443218 RPS6KA4O75676 772 aa22.62■■□□□ 1.21
ODC1-203ENST00000443218 TOMM70O94826 608 aa22.62■■□□□ 1.21
ODC1-203ENST00000443218 ADRA2BP18089 450 aa22.61■■□□□ 1.21
ODC1-203ENST00000443218 APLP1P51693 650 aa22.61■■□□□ 1.21
ODC1-203ENST00000443218 DCAF5Q96JK2 942 aa22.6■■□□□ 1.21
ODC1-203ENST00000443218 CCDC87Q9NVE4 849 aa22.6■■□□□ 1.21
ODC1-203ENST00000443218 ARFGEF1Q9Y6D6 1849 aa22.59■■□□□ 1.21
ODC1-203ENST00000443218 FCHSD2O94868 740 aa22.59■■□□□ 1.21
ODC1-203ENST00000443218 RFC4P35249 363 aa22.58■■□□□ 1.21
ODC1-203ENST00000443218 TJP1Q07157 1748 aa22.57■■□□□ 1.2
ODC1-203ENST00000443218 SRP68Q9UHB9 627 aaKnown RBP22.57■■□□□ 1.2
ODC1-203ENST00000443218 PARP3Q9Y6F1 533 aa22.57■■□□□ 1.2
ODC1-203ENST00000443218 ADAMTS7Q9UKP4 1686 aa22.57■■□□□ 1.2
ODC1-203ENST00000443218 DDR1Q08345 913 aa22.56■■□□□ 1.2
ODC1-203ENST00000443218 C9orf131Q5VYM1 1079 aa22.56■■□□□ 1.2
ODC1-203ENST00000443218 ZNF530Q6P9A1 599 aaPredicted RBP22.56■■□□□ 1.2
ODC1-203ENST00000443218 AEBP1Q8IUX7 1158 aa22.56■■□□□ 1.2
ODC1-203ENST00000443218 WDR90Q96KV7 1748 aa22.56■■□□□ 1.2
ODC1-203ENST00000443218 PTCD1O75127 700 aaKnown RBP22.55■■□□□ 1.2
ODC1-203ENST00000443218 HSP90AB1P08238 724 aaKnown RBP22.55■■□□□ 1.2
ODC1-203ENST00000443218 CABP4P57796 275 aa22.55■■□□□ 1.2
ODC1-203ENST00000443218 FKBP8Q14318 412 aa22.55■■□□□ 1.2
ODC1-203ENST00000443218 PLEKHO1Q53GL0 409 aaPredicted RBP22.55■■□□□ 1.2
ODC1-203ENST00000443218 CRKLP46109 303 aaKnown RBP22.54■■□□□ 1.2
ODC1-203ENST00000443218 HTRA3P83110 453 aa22.54■■□□□ 1.2
ODC1-203ENST00000443218 POLR3GLQ9BT43 218 aa22.53■■□□□ 1.2
ODC1-203ENST00000443218 USP42Q9H9J4 1324 aaKnown RBP22.53■■□□□ 1.2
ODC1-203ENST00000443218 KCPQ6ZWJ8 1503 aa22.52■■□□□ 1.2
ODC1-203ENST00000443218 NFATC2IPQ8NCF5 419 aa22.52■■□□□ 1.2
ODC1-203ENST00000443218 RBM46Q8TBY0 533 aaKnown RBP22.52■■□□□ 1.2
ODC1-203ENST00000443218 CHRNA5P30532 468 aa22.51■■□□□ 1.19
ODC1-203ENST00000443218 MTHFSP49914 203 aa22.51■■□□□ 1.19
ODC1-203ENST00000443218 INTS5Q6P9B9 1019 aaKnown RBP22.51■■□□□ 1.19
ODC1-203ENST00000443218 PIM2Q9P1W9 311 aa22.51■■□□□ 1.19
ODC1-203ENST00000443218 SBF1O95248 1867 aa22.5■■□□□ 1.19
ODC1-203ENST00000443218 AMOTQ4VCS5 1084 aa22.5■■□□□ 1.19
ODC1-203ENST00000443218 SCN11AQ9UI33 1791 aa22.49■■□□□ 1.19
ODC1-203ENST00000443218 PANK3Q9H999 370 aa22.49■■□□□ 1.19
ODC1-203ENST00000443218 POLRMTO00411 1230 aaKnown RBP22.48■■□□□ 1.19
ODC1-203ENST00000443218 TM4SF1P30408 202 aa22.48■■□□□ 1.19
ODC1-203ENST00000443218 DALRD3Q5D0E6 543 aaKnown RBP22.48■■□□□ 1.19
ODC1-203ENST00000443218 RNF181Q9P0P0 153 aa22.47■■□□□ 1.19
ODC1-203ENST00000443218 C1orf141Q5JVX7 400 aa22.45■■□□□ 1.18
ODC1-203ENST00000443218 SULT6B1Q6IMI4 303 aa22.45■■□□□ 1.18
ODC1-203ENST00000443218 DNAJC10Q8IXB1 793 aa22.45■■□□□ 1.18
ODC1-203ENST00000443218 RRAGCQ9HB90 399 aa22.45■■□□□ 1.18
ODC1-203ENST00000443218 PRELPP51888 382 aa22.44■■□□□ 1.18
ODC1-203ENST00000443218 AFDNP55196 1824 aaKnown RBP22.44■■□□□ 1.18
ODC1-203ENST00000443218 JMYQ8N9B5 988 aa22.44■■□□□ 1.18
ODC1-203ENST00000443218 KLRG1Q96E93 195 aa22.44■■□□□ 1.18
ODC1-203ENST00000443218 TNRC6CQ9HCJ0 1690 aaKnown RBP22.43■■□□□ 1.18
ODC1-203ENST00000443218 IL13P35225 146 aa22.43■■□□□ 1.18
ODC1-203ENST00000443218 FSTL1Q12841 308 aa22.43■■□□□ 1.18
ODC1-203ENST00000443218 USPL1Q5W0Q7 1092 aa22.43■■□□□ 1.18
ODC1-203ENST00000443218 TIMELESSQ9UNS1 1208 aa22.43■■□□□ 1.18
ODC1-203ENST00000443218 SOS1Q07889 1333 aaPredicted RBP22.42■■□□□ 1.18
ODC1-203ENST00000443218 KDM2BQ8NHM5 1336 aa22.42■■□□□ 1.18
ODC1-203ENST00000443218 C16orf71Q8IYS4 520 aaPredicted RBP22.42■■□□□ 1.18
ODC1-203ENST00000443218 LGR6Q9HBX8 967 aa22.42■■□□□ 1.18
ODC1-203ENST00000443218 NRXN2Q9P2S2 1712 aa22.42■■□□□ 1.18
ODC1-203ENST00000443218 RASSF7Q02833 373 aa22.41■■□□□ 1.18
ODC1-203ENST00000443218 COL13A1Q5TAT6 717 aaPredicted RBP22.41■■□□□ 1.18
ODC1-203ENST00000443218 HSPA5P11021 654 aaKnown RBP22.4■■□□□ 1.18
ODC1-203ENST00000443218 MORC1Q86VD1 984 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms