RNA–Protein interactions for RNA: ENST00000443206.2

TOM1-208, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-208ENST00000443206 VIRMAQ69YN4 1812 aaKnown RBP17.57■□□□□ 0.4
TOM1-208ENST00000443206 ATP6V1AP38606 617 aa17.57■□□□□ 0.4
TOM1-208ENST00000443206 FLAD1Q8NFF5 587 aa17.57■□□□□ 0.4
TOM1-208ENST00000443206 AK7Q96M32 723 aa17.57■□□□□ 0.4
TOM1-208ENST00000443206 PTGER2P43116 358 aa17.56■□□□□ 0.4
TOM1-208ENST00000443206 RBM42Q9BTD8 480 aaKnown RBP17.56■□□□□ 0.4
TOM1-208ENST00000443206 U2AF1L5P0DN76 240 aaPredicted RBP17.55■□□□□ 0.4
TOM1-208ENST00000443206 U2AF1Q01081 240 aaKnown RBP eCLIP17.55■□□□□ 0.4
TOM1-208ENST00000443206 GAS2L2Q8NHY3 880 aa17.55■□□□□ 0.4
TOM1-208ENST00000443206 LGR6Q9HBX8 967 aa17.55■□□□□ 0.4
TOM1-208ENST00000443206 C4BP0C0L5 1744 aa17.55■□□□□ 0.4
TOM1-208ENST00000443206 RNMTO43148 476 aaKnown RBP17.54■□□□□ 0.4
TOM1-208ENST00000443206 COL23A1Q86Y22 540 aaPredicted RBP17.54■□□□□ 0.4
TOM1-208ENST00000443206 SLC52A2Q9HAB3 445 aa17.54■□□□□ 0.4
TOM1-208ENST00000443206 POLD1P28340 1107 aa17.53■□□□□ 0.4
TOM1-208ENST00000443206 PRKAR2BP31323 418 aa17.53■□□□□ 0.4
TOM1-208ENST00000443206 RALBP1Q15311 655 aa17.53■□□□□ 0.4
TOM1-208ENST00000443206 FCHSD2O94868 740 aa17.52■□□□□ 0.4
TOM1-208ENST00000443206 ITPK1Q13572 414 aa17.52■□□□□ 0.4
TOM1-208ENST00000443206 LINC00116Q8NCU8 138 aa17.52■□□□□ 0.4
TOM1-208ENST00000443206 ARXQ96QS3 562 aa17.52■□□□□ 0.4
TOM1-208ENST00000443206 SGIP1Q9BQI5 828 aa17.52■□□□□ 0.4
TOM1-208ENST00000443206 RSPH6AQ9H0K4 717 aa17.52■□□□□ 0.4
TOM1-208ENST00000443206 GNAT3A8MTJ3 354 aa17.51■□□□□ 0.39
TOM1-208ENST00000443206 PTCD1O75127 700 aaKnown RBP17.51■□□□□ 0.39
TOM1-208ENST00000443206 UBR3Q6ZT12 1888 aa17.51■□□□□ 0.39
TOM1-208ENST00000443206 ZNF831Q5JPB2 1677 aa17.51■□□□□ 0.39
TOM1-208ENST00000443206 DCAF8L1A6NGE4 600 aa17.5■□□□□ 0.39
TOM1-208ENST00000443206 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.49■□□□□ 0.39
TOM1-208ENST00000443206 GNPATO15228 680 aa17.49■□□□□ 0.39
TOM1-208ENST00000443206 PHF14O94880 888 aa17.49■□□□□ 0.39
TOM1-208ENST00000443206 NEFMP07197 916 aa17.49■□□□□ 0.39
TOM1-208ENST00000443206 SSFA2P28290 1259 aa17.49■□□□□ 0.39
TOM1-208ENST00000443206 PHACTR3Q96KR7 559 aa17.49■□□□□ 0.39
TOM1-208ENST00000443206 SLC4A9Q96Q91 983 aa17.49■□□□□ 0.39
TOM1-208ENST00000443206 MAP3K5Q99683 1374 aa17.49■□□□□ 0.39
TOM1-208ENST00000443206 TEFQ10587 303 aa17.48■□□□□ 0.39
TOM1-208ENST00000443206 FHDC1Q9C0D6 1143 aaPredicted RBP17.48■□□□□ 0.39
TOM1-208ENST00000443206 COL24A1Q17RW2 1714 aa17.47■□□□□ 0.39
TOM1-208ENST00000443206 RC3H1Q5TC82 1133 aaKnown RBP17.47■□□□□ 0.39
TOM1-208ENST00000443206 RTCBQ9Y3I0 505 aaKnown RBP17.47■□□□□ 0.39
TOM1-208ENST00000443206 ADAMTS7Q9UKP4 1686 aa17.47■□□□□ 0.39
TOM1-208ENST00000443206 MRC1P22897 1456 aa17.46■□□□□ 0.39
TOM1-208ENST00000443206 SLC39A6Q13433 755 aa17.46■□□□□ 0.39
TOM1-208ENST00000443206 IL17REQ8NFR9 667 aa17.46■□□□□ 0.39
TOM1-208ENST00000443206 SYT17Q9BSW7 474 aa17.46■□□□□ 0.39
TOM1-208ENST00000443206 COL5A3P25940 1745 aaPredicted RBP17.45■□□□□ 0.38
TOM1-208ENST00000443206 TRAPPC3LQ5T215 181 aa17.45■□□□□ 0.38
TOM1-208ENST00000443206 MSL1Q68DK7 614 aa17.45■□□□□ 0.38
TOM1-208ENST00000443206 SMIM5Q71RC9 77 aa17.45■□□□□ 0.38
TOM1-208ENST00000443206 AMIGO3Q86WK7 504 aa17.45■□□□□ 0.38
TOM1-208ENST00000443206 RTF1Q92541 710 aaKnown RBP17.45■□□□□ 0.38
TOM1-208ENST00000443206 PNNQ9H307 717 aaKnown RBP17.45■□□□□ 0.38
TOM1-208ENST00000443206 CNTNAP4Q9C0A0 1308 aa17.45■□□□□ 0.38
TOM1-208ENST00000443206 MYH14Q7Z406 1995 aaKnown RBP17.44■□□□□ 0.38
TOM1-208ENST00000443206 TTC5Q8N0Z6 440 aa17.44■□□□□ 0.38
TOM1-208ENST00000443206 KLHL34Q8N239 644 aa17.44■□□□□ 0.38
TOM1-208ENST00000443206 RPS6KA4O75676 772 aa17.43■□□□□ 0.38
TOM1-208ENST00000443206 MYBBP1AQ9BQG0 1328 aaKnown RBP17.43■□□□□ 0.38
TOM1-208ENST00000443206 ADRA2BP18089 450 aa17.42■□□□□ 0.38
TOM1-208ENST00000443206 CRKLP46109 303 aaKnown RBP17.42■□□□□ 0.38
TOM1-208ENST00000443206 RFC4P35249 363 aa17.41■□□□□ 0.38
TOM1-208ENST00000443206 DNAJC10Q8IXB1 793 aa17.41■□□□□ 0.38
TOM1-208ENST00000443206 CEMIPQ8WUJ3 1361 aa17.4■□□□□ 0.38
TOM1-208ENST00000443206 HTATSF1O43719 755 aaKnown RBP17.4■□□□□ 0.38
TOM1-208ENST00000443206 ZNF790Q6PG37 636 aa17.4■□□□□ 0.38
TOM1-208ENST00000443206 VSIG10Q8N0Z9 540 aa17.4■□□□□ 0.38
TOM1-208ENST00000443206 ARHGEF1Q92888 912 aaKnown RBP17.4■□□□□ 0.38
TOM1-208ENST00000443206 TJP1Q07157 1748 aa17.4■□□□□ 0.38
TOM1-208ENST00000443206 SIPA1L3O60292 1781 aaPredicted RBP17.4■□□□□ 0.38
TOM1-208ENST00000443206 CICQ96RK0 1608 aaPredicted RBP17.39■□□□□ 0.38
TOM1-208ENST00000443206 BTBD11A6QL63 1104 aa17.39■□□□□ 0.37
TOM1-208ENST00000443206 MCM10Q7L590 875 aa17.39■□□□□ 0.37
TOM1-208ENST00000443206 MAPK8IP3Q9UPT6 1336 aa17.39■□□□□ 0.37
TOM1-208ENST00000443206 UBR2Q8IWV8 1755 aa17.38■□□□□ 0.37
TOM1-208ENST00000443206 KCPQ6ZWJ8 1503 aa17.38■□□□□ 0.37
TOM1-208ENST00000443206 PLEKHF1Q96S99 279 aa17.38■□□□□ 0.37
TOM1-208ENST00000443206 CCDC87Q9NVE4 849 aa17.38■□□□□ 0.37
TOM1-208ENST00000443206 DLG5Q8TDM6 1919 aa17.38■□□□□ 0.37
TOM1-208ENST00000443206 CYP19A1P11511 503 aaPredicted RBP17.37■□□□□ 0.37
TOM1-208ENST00000443206 INTS5Q6P9B9 1019 aaKnown RBP17.37■□□□□ 0.37
TOM1-208ENST00000443206 NLGN1Q8N2Q7 840 aa17.37■□□□□ 0.37
TOM1-208ENST00000443206 TEX13AQ9BXU3 409 aaPredicted RBP17.37■□□□□ 0.37
TOM1-208ENST00000443206 PRKRIP1Q9H875 184 aaPredicted RBP17.37■□□□□ 0.37
TOM1-208ENST00000443206 STARD3NLO95772 234 aa17.36■□□□□ 0.37
TOM1-208ENST00000443206 DCTN1Q14203 1278 aa17.36■□□□□ 0.37
TOM1-208ENST00000443206 NFE2L2Q16236 605 aa17.36■□□□□ 0.37
TOM1-208ENST00000443206 ZNF496Q96IT1 587 aaPredicted RBP17.36■□□□□ 0.37
TOM1-208ENST00000443206 FMNL2Q96PY5 1086 aa17.36■□□□□ 0.37
TOM1-208ENST00000443206 ZNF316A6NFI3 1004 aaPredicted RBP17.35■□□□□ 0.37
TOM1-208ENST00000443206 HEG1Q9ULI3 1381 aa17.35■□□□□ 0.37
TOM1-208ENST00000443206 MMP10P09238 476 aa17.34■□□□□ 0.37
TOM1-208ENST00000443206 WDR43Q15061 677 aaKnown RBP eCLIP17.34■□□□□ 0.37
TOM1-208ENST00000443206 TAF7Q15545 349 aaPredicted RBP17.34■□□□□ 0.37
TOM1-208ENST00000443206 CD2APQ9Y5K6 639 aa17.34■□□□□ 0.37
TOM1-208ENST00000443206 ZPR1O75312 459 aa17.33■□□□□ 0.36
TOM1-208ENST00000443206 GYS1P13807 737 aa17.33■□□□□ 0.36
TOM1-208ENST00000443206 GPR162Q16538 588 aa17.33■□□□□ 0.36
TOM1-208ENST00000443206 C4AP0C0L4 1744 aa17.33■□□□□ 0.36
TOM1-208ENST00000443206 KCNQ3O43525 872 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms