RNA–Protein interactions for RNA: ENST00000442921.6

PTPRO-203, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 3,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-203ENST00000442921 ZNF830Q96NB3 372 aaPredicted RBP6.59□□□□□ -1.35
PTPRO-203ENST00000442921 KDM5CP41229 1560 aa6.59□□□□□ -1.35
PTPRO-203ENST00000442921 UHRF1BP1Q6BDS2 1440 aa6.59□□□□□ -1.35
PTPRO-203ENST00000442921 USP17L3A6NCW0 530 aa6.59□□□□□ -1.35
PTPRO-203ENST00000442921 USP17L4A6NCW7 530 aa6.59□□□□□ -1.35
PTPRO-203ENST00000442921 TMEM88BA6NKF7 163 aa6.59□□□□□ -1.35
PTPRO-203ENST00000442921 USP17L2Q6R6M4 530 aa6.59□□□□□ -1.35
PTPRO-203ENST00000442921 USP17L1Q7RTZ2 530 aa6.59□□□□□ -1.35
PTPRO-203ENST00000442921 MKNK1Q9BUB5 465 aa6.59□□□□□ -1.35
PTPRO-203ENST00000442921 TRAIPQ9BWF2 469 aa6.59□□□□□ -1.35
PTPRO-203ENST00000442921 TAF3Q5VWG9 929 aa6.58□□□□□ -1.36
PTPRO-203ENST00000442921 PRKRIP1Q9H875 184 aaPredicted RBP6.58□□□□□ -1.36
PTPRO-203ENST00000442921 RRP7BPQ9NSQ0 103 aa6.58□□□□□ -1.36
PTPRO-203ENST00000442921 PCDHB9Q9Y5E1 797 aa6.58□□□□□ -1.36
PTPRO-203ENST00000442921 GRIN2AQ12879 1464 aa6.58□□□□□ -1.36
PTPRO-203ENST00000442921 TTC36A6NLP5 189 aa6.58□□□□□ -1.36
PTPRO-203ENST00000442921 CSB-PGBD3P0DP91 1061 aa6.58□□□□□ -1.36
PTPRO-203ENST00000442921 PPP4CP60510 307 aa6.58□□□□□ -1.36
PTPRO-203ENST00000442921 NBPF1Q3BBV0 1214 aa6.58□□□□□ -1.36
PTPRO-203ENST00000442921 NBPF8Q3BBV2 869 aa6.58□□□□□ -1.36
PTPRO-203ENST00000442921 DHX29Q7Z478 1369 aaKnown RBP6.58□□□□□ -1.36
PTPRO-203ENST00000442921 TROQ12816 1431 aaPredicted RBP6.58□□□□□ -1.36
PTPRO-203ENST00000442921 CDC42BPAQ5VT25 1732 aa6.58□□□□□ -1.36
PTPRO-203ENST00000442921 SHANK2Q9UPX8 1470 aa6.58□□□□□ -1.36
PTPRO-203ENST00000442921 ARHGEF12Q9NZN5 1544 aa6.58□□□□□ -1.36
PTPRO-203ENST00000442921 USP17L5A8MUK1 530 aa6.58□□□□□ -1.36
PTPRO-203ENST00000442921 PPEF1O14829 653 aaPredicted RBP6.58□□□□□ -1.36
PTPRO-203ENST00000442921 WNT2BQ93097 391 aa6.58□□□□□ -1.36
PTPRO-203ENST00000442921 YY1AP1Q9H869 796 aa6.58□□□□□ -1.36
PTPRO-203ENST00000442921 CWC22Q9HCG8 908 aaKnown RBP6.58□□□□□ -1.36
PTPRO-203ENST00000442921 ZBED9Q6R2W3 1325 aa6.57□□□□□ -1.36
PTPRO-203ENST00000442921 E9PCH4 1651 aa6.57□□□□□ -1.36
PTPRO-203ENST00000442921 CAMSAP2Q08AD1 1489 aa6.57□□□□□ -1.36
PTPRO-203ENST00000442921 GOLGA8CPA6NN73 597 aa6.57□□□□□ -1.36
PTPRO-203ENST00000442921 CCDC27Q2M243 656 aa6.57□□□□□ -1.36
PTPRO-203ENST00000442921 FAM160A2Q8N612 972 aaPredicted RBP6.57□□□□□ -1.36
PTPRO-203ENST00000442921 PRM3Q9NNZ6 103 aa6.57□□□□□ -1.36
PTPRO-203ENST00000442921 RNF123Q5XPI4 1314 aa6.57□□□□□ -1.36
PTPRO-203ENST00000442921 GPATCH8Q9UKJ3 1502 aaKnown RBP6.57□□□□□ -1.36
PTPRO-203ENST00000442921 EIF4G3O43432 1585 aaKnown RBP6.57□□□□□ -1.36
PTPRO-203ENST00000442921 AGERQ15109 404 aa6.57□□□□□ -1.36
PTPRO-203ENST00000442921 LHX8Q68G74 356 aa6.57□□□□□ -1.36
PTPRO-203ENST00000442921 MAMSTRQ6ZN01 415 aa6.57□□□□□ -1.36
PTPRO-203ENST00000442921 FKBPLQ9UIM3 349 aa6.57□□□□□ -1.36
PTPRO-203ENST00000442921 HDAC5Q9UQL6 1122 aa6.57□□□□□ -1.36
PTPRO-203ENST00000442921 SNPHO15079 494 aa6.56□□□□□ -1.36
PTPRO-203ENST00000442921 HSP90AB4PQ58FF6 505 aa6.56□□□□□ -1.36
PTPRO-203ENST00000442921 NUDT12Q9BQG2 462 aa6.56□□□□□ -1.36
PTPRO-203ENST00000442921 KIAA1107Q9UPP5 1409 aa6.56□□□□□ -1.36
PTPRO-203ENST00000442921 CCDC184Q52MB2 194 aa6.56□□□□□ -1.36
PTPRO-203ENST00000442921 PHLDB3Q6NSJ2 640 aa6.56□□□□□ -1.36
PTPRO-203ENST00000442921 ADAM32Q8TC27 787 aa6.56□□□□□ -1.36
PTPRO-203ENST00000442921 CDCA7Q9BWT1 371 aaPredicted RBP6.56□□□□□ -1.36
PTPRO-203ENST00000442921 ZNF608Q9ULD9 1512 aaPredicted RBP6.56□□□□□ -1.36
PTPRO-203ENST00000442921 CEP170Q5SW79 1584 aa6.55□□□□□ -1.36
PTPRO-203ENST00000442921 MAGI1Q96QZ7 1491 aaPredicted RBP6.55□□□□□ -1.36
PTPRO-203ENST00000442921 SMG6Q86US8 1419 aaKnown RBP6.55□□□□□ -1.36
PTPRO-203ENST00000442921 KIF7Q2M1P5 1343 aa6.55□□□□□ -1.36
PTPRO-203ENST00000442921 PRMT3O60678 531 aa6.55□□□□□ -1.36
PTPRO-203ENST00000442921 OXLD1Q5BKU9 147 aa6.55□□□□□ -1.36
PTPRO-203ENST00000442921 ABCA8O94911 1581 aa6.55□□□□□ -1.36
PTPRO-203ENST00000442921 ABCC10Q5T3U5 1492 aa6.55□□□□□ -1.36
PTPRO-203ENST00000442921 RALGAPBQ86X10 1494 aa6.55□□□□□ -1.36
PTPRO-203ENST00000442921 PTPRGP23470 1445 aa6.55□□□□□ -1.36
PTPRO-203ENST00000442921 RASA1P20936 1047 aa6.55□□□□□ -1.36
PTPRO-203ENST00000442921 HNRNPUQ00839 825 aaKnown RBP eCLIP6.55□□□□□ -1.36
PTPRO-203ENST00000442921 KMT5BQ4FZB7 885 aa6.55□□□□□ -1.36
PTPRO-203ENST00000442921 ZNF687Q8N1G0 1237 aa6.55□□□□□ -1.36
PTPRO-203ENST00000442921 MAP7D2Q96T17 732 aa6.55□□□□□ -1.36
PTPRO-203ENST00000442921 PPP4R2Q9NY27 417 aa6.55□□□□□ -1.36
PTPRO-203ENST00000442921 MKRN1Q9UHC7 482 aaKnown RBP6.55□□□□□ -1.36
PTPRO-203ENST00000442921 ARHGEF5Q12774 1597 aa6.55□□□□□ -1.36
PTPRO-203ENST00000442921 ACTN4O43707 911 aaKnown RBP6.55□□□□□ -1.36
PTPRO-203ENST00000442921 CLDN10P78369 228 aa6.55□□□□□ -1.36
PTPRO-203ENST00000442921 BRICD5Q6PL45 260 aa6.55□□□□□ -1.36
PTPRO-203ENST00000442921 THAP11Q96EK4 314 aa6.55□□□□□ -1.36
PTPRO-203ENST00000442921 SPSB2Q99619 263 aa6.55□□□□□ -1.36
PTPRO-203ENST00000442921 CARD10Q9BWT7 1032 aa6.55□□□□□ -1.36
PTPRO-203ENST00000442921 POTEMA6NI47 508 aa6.54□□□□□ -1.36
PTPRO-203ENST00000442921 ZBBXA8MT70 800 aa6.54□□□□□ -1.36
PTPRO-203ENST00000442921 GJA5P36382 358 aa6.54□□□□□ -1.36
PTPRO-203ENST00000442921 RGS3P49796 1198 aa6.54□□□□□ -1.36
PTPRO-203ENST00000442921 WASHC4Q2M389 1173 aa6.54□□□□□ -1.36
PTPRO-203ENST00000442921 TUSC1Q2TAM9 212 aa6.54□□□□□ -1.36
PTPRO-203ENST00000442921 LYPD8Q6UX82 237 aa6.54□□□□□ -1.36
PTPRO-203ENST00000442921 CHIC2Q9UKJ5 165 aa6.54□□□□□ -1.36
PTPRO-203ENST00000442921 NUP160Q12769 1436 aa6.54□□□□□ -1.36
PTPRO-203ENST00000442921 FAM177A1Q8N128 213 aaPredicted RBP6.54□□□□□ -1.36
PTPRO-203ENST00000442921 PRIMPOLQ96LW4 560 aa6.54□□□□□ -1.36
PTPRO-203ENST00000442921 PURBQ96QR8 312 aaKnown RBP6.54□□□□□ -1.36
PTPRO-203ENST00000442921 LAS1LQ9Y4W2 734 aaKnown RBP6.54□□□□□ -1.36
PTPRO-203ENST00000442921 PLEKHD1A6NEE1 506 aa6.53□□□□□ -1.36
PTPRO-203ENST00000442921 SLC4A3P48751 1232 aa6.53□□□□□ -1.36
PTPRO-203ENST00000442921 ANKK1Q8NFD2 765 aa6.53□□□□□ -1.36
PTPRO-203ENST00000442921 MKL1Q969V6 931 aa6.53□□□□□ -1.36
PTPRO-203ENST00000442921 NOVA2Q9UNW9 492 aaKnown RBP6.53□□□□□ -1.36
PTPRO-203ENST00000442921 LAMC1P11047 1609 aa6.53□□□□□ -1.36
PTPRO-203ENST00000442921 ATP9BO43861 1147 aa6.53□□□□□ -1.36
PTPRO-203ENST00000442921 F12P00748 615 aaPredicted RBP6.53□□□□□ -1.36
PTPRO-203ENST00000442921 TAGLNQ01995 201 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms