RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 TMOD3Q9NYL9 352 aa11.54□□□□□ -0.56
TOP3B-209ENST00000442653 TIMELESSQ9UNS1 1208 aa11.54□□□□□ -0.56
TOP3B-209ENST00000442653 HMGB2P26583 209 aaKnown RBP11.53□□□□□ -0.56
TOP3B-209ENST00000442653 ATP10DQ9P241 1426 aa11.52□□□□□ -0.56
TOP3B-209ENST00000442653 GNPATO15228 680 aa11.52□□□□□ -0.57
TOP3B-209ENST00000442653 SSFA2P28290 1259 aa11.52□□□□□ -0.57
TOP3B-209ENST00000442653 IFNL2Q8IZJ0 200 aa11.52□□□□□ -0.57
TOP3B-209ENST00000442653 ATG3Q9NT62 314 aa11.52□□□□□ -0.57
TOP3B-209ENST00000442653 WWC3Q9ULE0 1092 aa11.52□□□□□ -0.57
TOP3B-209ENST00000442653 KDRP35968 1356 aa11.52□□□□□ -0.57
TOP3B-209ENST00000442653 ATP6V1AP38606 617 aa11.51□□□□□ -0.57
TOP3B-209ENST00000442653 SLC4A9Q96Q91 983 aa11.51□□□□□ -0.57
TOP3B-209ENST00000442653 IGSF1Q8N6C5 1336 aa11.51□□□□□ -0.57
TOP3B-209ENST00000442653 ADCY9O60503 1353 aa11.51□□□□□ -0.57
TOP3B-209ENST00000442653 PCGF6Q9BYE7 350 aa11.5□□□□□ -0.57
TOP3B-209ENST00000442653 PANK3Q9H999 370 aa11.49□□□□□ -0.57
TOP3B-209ENST00000442653 CLSPNQ9HAW4 1339 aa11.49□□□□□ -0.57
TOP3B-209ENST00000442653 PLEKHG2Q9H7P9 1386 aa11.49□□□□□ -0.57
TOP3B-209ENST00000442653 KDM6AO15550 1401 aaPredicted RBP11.49□□□□□ -0.57
TOP3B-209ENST00000442653 MMP10P09238 476 aa11.48□□□□□ -0.57
TOP3B-209ENST00000442653 HSPA5P11021 654 aaKnown RBP11.48□□□□□ -0.57
TOP3B-209ENST00000442653 AEBP1Q8IUX7 1158 aa11.48□□□□□ -0.57
TOP3B-209ENST00000442653 COL5A3P25940 1745 aaPredicted RBP11.47□□□□□ -0.57
TOP3B-209ENST00000442653 KIAA1551Q9HCM1 1747 aa11.47□□□□□ -0.57
TOP3B-209ENST00000442653 ZNF831Q5JPB2 1677 aa11.47□□□□□ -0.57
TOP3B-209ENST00000442653 ERVV-2B6SEH9 535 aa11.47□□□□□ -0.57
TOP3B-209ENST00000442653 ZNF526Q8TF50 670 aaPredicted RBP11.47□□□□□ -0.57
TOP3B-209ENST00000442653 DCAF5Q96JK2 942 aa11.47□□□□□ -0.57
TOP3B-209ENST00000442653 CICQ96RK0 1608 aaPredicted RBP11.46□□□□□ -0.57
TOP3B-209ENST00000442653 PXDNLA1KZ92 1463 aa11.46□□□□□ -0.57
TOP3B-209ENST00000442653 EIF4G2P78344 907 aaKnown RBP eCLIP11.46□□□□□ -0.57
TOP3B-209ENST00000442653 ZNF530Q6P9A1 599 aaPredicted RBP11.46□□□□□ -0.57
TOP3B-209ENST00000442653 RBM42Q9BTD8 480 aaKnown RBP11.46□□□□□ -0.57
TOP3B-209ENST00000442653 GPBP1L1Q9HC44 474 aaPredicted RBP11.46□□□□□ -0.57
TOP3B-209ENST00000442653 RTCBQ9Y3I0 505 aaKnown RBP11.46□□□□□ -0.57
TOP3B-209ENST00000442653 KIF13BQ9NQT8 1826 aa11.46□□□□□ -0.58
TOP3B-209ENST00000442653 C10orf71Q711Q0 1435 aa11.45□□□□□ -0.58
TOP3B-209ENST00000442653 MYH14Q7Z406 1995 aaKnown RBP11.45□□□□□ -0.58
TOP3B-209ENST00000442653 HSP90AB1P08238 724 aaKnown RBP11.45□□□□□ -0.58
TOP3B-209ENST00000442653 PLEKHO1Q53GL0 409 aaPredicted RBP11.45□□□□□ -0.58
TOP3B-209ENST00000442653 TRAPPC3LQ5T215 181 aa11.45□□□□□ -0.58
TOP3B-209ENST00000442653 ARHGEF1Q92888 912 aaKnown RBP11.45□□□□□ -0.58
TOP3B-209ENST00000442653 C4AP0C0L4 1744 aa11.44□□□□□ -0.58
TOP3B-209ENST00000442653 CNTNAP4Q9C0A0 1308 aa11.44□□□□□ -0.58
TOP3B-209ENST00000442653 CABP4P57796 275 aa11.44□□□□□ -0.58
TOP3B-209ENST00000442653 RC3H1Q5TC82 1133 aaKnown RBP11.44□□□□□ -0.58
TOP3B-209ENST00000442653 N4BP2Q86UW6 1770 aaPredicted RBP11.44□□□□□ -0.58
TOP3B-209ENST00000442653 A0A0G2JLW4 131 aa11.43□□□□□ -0.58
TOP3B-209ENST00000442653 PTCD1O75127 700 aaKnown RBP11.43□□□□□ -0.58
TOP3B-209ENST00000442653 RPS6KA4O75676 772 aa11.43□□□□□ -0.58
TOP3B-209ENST00000442653 GYS1P13807 737 aa11.43□□□□□ -0.58
TOP3B-209ENST00000442653 MTHFSP49914 203 aa11.43□□□□□ -0.58
TOP3B-209ENST00000442653 AMOTQ4VCS5 1084 aa11.43□□□□□ -0.58
TOP3B-209ENST00000442653 MORC1Q86VD1 984 aa11.43□□□□□ -0.58
TOP3B-209ENST00000442653 NLGN1Q8N2Q7 840 aa11.43□□□□□ -0.58
TOP3B-209ENST00000442653 SLC4A2P04920 1241 aa11.42□□□□□ -0.58
TOP3B-209ENST00000442653 RFC4P35249 363 aa11.42□□□□□ -0.58
TOP3B-209ENST00000442653 SULT6B1Q6IMI4 303 aa11.42□□□□□ -0.58
TOP3B-209ENST00000442653 NFATC2IPQ8NCF5 419 aa11.42□□□□□ -0.58
TOP3B-209ENST00000442653 TJP1Q07157 1748 aa11.41□□□□□ -0.58
TOP3B-209ENST00000442653 ZBTB22O15209 634 aa11.41□□□□□ -0.58
TOP3B-209ENST00000442653 DPEP1P16444 411 aa11.41□□□□□ -0.58
TOP3B-209ENST00000442653 IL13P35225 146 aa11.41□□□□□ -0.58
TOP3B-209ENST00000442653 CRKLP46109 303 aaKnown RBP11.41□□□□□ -0.58
TOP3B-209ENST00000442653 TGFB2P61812 414 aa11.41□□□□□ -0.58
TOP3B-209ENST00000442653 C1orf141Q5JVX7 400 aa11.41□□□□□ -0.58
TOP3B-209ENST00000442653 SRP68Q9UHB9 627 aaKnown RBP11.41□□□□□ -0.58
TOP3B-209ENST00000442653 BCS1LQ9Y276 419 aa11.41□□□□□ -0.58
TOP3B-209ENST00000442653 BRCA1P38398 1863 aaKnown RBP11.4□□□□□ -0.58
TOP3B-209ENST00000442653 KIF3CO14782 793 aa11.4□□□□□ -0.58
TOP3B-209ENST00000442653 AMER1Q5JTC6 1135 aaPredicted RBP11.4□□□□□ -0.58
TOP3B-209ENST00000442653 SCN11AQ9UI33 1791 aa11.4□□□□□ -0.58
TOP3B-209ENST00000442653 HSPA6P17066 643 aa11.39□□□□□ -0.59
TOP3B-209ENST00000442653 KCNA3P22001 575 aa11.39□□□□□ -0.59
TOP3B-209ENST00000442653 DDR1Q08345 913 aa11.39□□□□□ -0.59
TOP3B-209ENST00000442653 FKBP8Q14318 412 aa11.39□□□□□ -0.59
TOP3B-209ENST00000442653 INTS5Q6P9B9 1019 aaKnown RBP11.39□□□□□ -0.59
TOP3B-209ENST00000442653 CCDC87Q9NVE4 849 aa11.39□□□□□ -0.59
TOP3B-209ENST00000442653 KNSTRNQ9Y448 316 aa11.39□□□□□ -0.59
TOP3B-209ENST00000442653 PARP3Q9Y6F1 533 aa11.39□□□□□ -0.59
TOP3B-209ENST00000442653 ADAMTS7Q9UKP4 1686 aa11.39□□□□□ -0.59
TOP3B-209ENST00000442653 USP42Q9H9J4 1324 aaKnown RBP11.38□□□□□ -0.59
TOP3B-209ENST00000442653 PCNTO95613 3336 aa11.38□□□□□ -0.59
TOP3B-209ENST00000442653 ARHGAP27Q6ZUM4 889 aa11.38□□□□□ -0.59
TOP3B-209ENST00000442653 FCHSD2O94868 740 aa11.37□□□□□ -0.59
TOP3B-209ENST00000442653 DNAJC10Q8IXB1 793 aa11.37□□□□□ -0.59
TOP3B-209ENST00000442653 CCER1Q8TC90 406 aaPredicted RBP11.37□□□□□ -0.59
TOP3B-209ENST00000442653 LGR6Q9HBX8 967 aa11.37□□□□□ -0.59
TOP3B-209ENST00000442653 MRC1P22897 1456 aa11.37□□□□□ -0.59
TOP3B-209ENST00000442653 KIF7Q2M1P5 1343 aa11.36□□□□□ -0.59
TOP3B-209ENST00000442653 HMOX1P09601 288 aa11.36□□□□□ -0.59
TOP3B-209ENST00000442653 AKAP4Q5JQC9 854 aa11.36□□□□□ -0.59
TOP3B-209ENST00000442653 SLC52A2Q9HAB3 445 aa11.36□□□□□ -0.59
TOP3B-209ENST00000442653 KCPQ6ZWJ8 1503 aa11.35□□□□□ -0.59
TOP3B-209ENST00000442653 ARFGEF1Q9Y6D6 1849 aa11.35□□□□□ -0.59
TOP3B-209ENST00000442653 CHRNA5P30532 468 aa11.35□□□□□ -0.59
TOP3B-209ENST00000442653 SLC39A6Q13433 755 aa11.35□□□□□ -0.59
TOP3B-209ENST00000442653 NMRK2Q9NPI5 230 aa11.35□□□□□ -0.59
TOP3B-209ENST00000442653 SOS1Q07889 1333 aaPredicted RBP11.35□□□□□ -0.59
TOP3B-209ENST00000442653 POLRMTO00411 1230 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms