RNA–Protein interactions for RNA: ENST00000442421.5

TRIM13-205, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-205ENST00000442421 BRCA1P38398 1863 aaKnown RBP17.78■□□□□ 0.44
TRIM13-205ENST00000442421 PHKG2P15735 406 aa17.78■□□□□ 0.44
TRIM13-205ENST00000442421 PXDNLA1KZ92 1463 aa17.77■□□□□ 0.44
TRIM13-205ENST00000442421 MMP10P09238 476 aa17.77■□□□□ 0.44
TRIM13-205ENST00000442421 IFNL2Q8IZJ0 200 aa17.77■□□□□ 0.44
TRIM13-205ENST00000442421 ATG3Q9NT62 314 aa17.77■□□□□ 0.44
TRIM13-205ENST00000442421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.77■□□□□ 0.444e-6■□□□□ 11.2
TRIM13-205ENST00000442421 C4AP0C0L4 1744 aa17.77■□□□□ 0.44
TRIM13-205ENST00000442421 ZNF831Q5JPB2 1677 aa17.77■□□□□ 0.43
TRIM13-205ENST00000442421 MYH14Q7Z406 1995 aaKnown RBP17.77■□□□□ 0.43
TRIM13-205ENST00000442421 KIF3CO14782 793 aa17.75■□□□□ 0.43
TRIM13-205ENST00000442421 POLKQ9UBT6 870 aa17.75■□□□□ 0.43
TRIM13-205ENST00000442421 KDRP35968 1356 aa17.75■□□□□ 0.43
TRIM13-205ENST00000442421 ARFGEF1Q9Y6D6 1849 aa17.73■□□□□ 0.43
TRIM13-205ENST00000442421 TNNT2P45379 298 aaPredicted RBP17.73■□□□□ 0.43
TRIM13-205ENST00000442421 EIF4A2Q14240 407 aaKnown RBP17.73■□□□□ 0.43
TRIM13-205ENST00000442421 C10orf71Q711Q0 1435 aa17.72■□□□□ 0.43
TRIM13-205ENST00000442421 A0A0G2JLW4 131 aa17.72■□□□□ 0.43
TRIM13-205ENST00000442421 SLC4A9Q96Q91 983 aa17.72■□□□□ 0.43
TRIM13-205ENST00000442421 RBM42Q9BTD8 480 aaKnown RBP17.72■□□□□ 0.43
TRIM13-205ENST00000442421 BCS1LQ9Y276 419 aa17.72■□□□□ 0.43
TRIM13-205ENST00000442421 RTCBQ9Y3I0 505 aaKnown RBP17.72■□□□□ 0.43
TRIM13-205ENST00000442421 TRAPPC3LQ5T215 181 aa17.71■□□□□ 0.43
TRIM13-205ENST00000442421 TGFB2P61812 414 aa17.7■□□□□ 0.42
TRIM13-205ENST00000442421 NLGN1Q8N2Q7 840 aa17.69■□□□□ 0.42
TRIM13-205ENST00000442421 ARHGEF1Q92888 912 aaKnown RBP17.69■□□□□ 0.42
TRIM13-205ENST00000442421 POLR3GLQ9BT43 218 aa17.69■□□□□ 0.42
TRIM13-205ENST00000442421 KDM6AO15550 1401 aaPredicted RBP17.69■□□□□ 0.42
TRIM13-205ENST00000442421 ERVV-2B6SEH9 535 aa17.68■□□□□ 0.42
TRIM13-205ENST00000442421 DPEP1P16444 411 aa17.68■□□□□ 0.42
TRIM13-205ENST00000442421 ARHGAP27Q6ZUM4 889 aa17.68■□□□□ 0.42
TRIM13-205ENST00000442421 PLEKHG2Q9H7P9 1386 aa17.67■□□□□ 0.42
TRIM13-205ENST00000442421 TJP1Q07157 1748 aa17.67■□□□□ 0.42
TRIM13-205ENST00000442421 GYS1P13807 737 aa17.67■□□□□ 0.42
TRIM13-205ENST00000442421 CCDC87Q9NVE4 849 aa17.67■□□□□ 0.42
TRIM13-205ENST00000442421 CNTNAP4Q9C0A0 1308 aa17.67■□□□□ 0.42
TRIM13-205ENST00000442421 WDR90Q96KV7 1748 aa17.67■□□□□ 0.42
TRIM13-205ENST00000442421 VIRMAQ69YN4 1812 aaKnown RBP17.66■□□□□ 0.42
TRIM13-205ENST00000442421 FCHSD2O94868 740 aa17.66■□□□□ 0.42
TRIM13-205ENST00000442421 ADRA2BP18089 450 aa17.66■□□□□ 0.42
TRIM13-205ENST00000442421 RFC4P35249 363 aa17.66■□□□□ 0.42
TRIM13-205ENST00000442421 RC3H1Q5TC82 1133 aaKnown RBP17.66■□□□□ 0.42
TRIM13-205ENST00000442421 DCAF5Q96JK2 942 aa17.66■□□□□ 0.42
TRIM13-205ENST00000442421 SCN11AQ9UI33 1791 aa17.66■□□□□ 0.42
TRIM13-205ENST00000442421 SBF1O95248 1867 aa17.65■□□□□ 0.42
TRIM13-205ENST00000442421 RPS6KA4O75676 772 aa17.65■□□□□ 0.42
TRIM13-205ENST00000442421 TOMM70O94826 608 aa17.65■□□□□ 0.42
TRIM13-205ENST00000442421 ZNF530Q6P9A1 599 aaPredicted RBP17.65■□□□□ 0.42
TRIM13-205ENST00000442421 NMRK2Q9NPI5 230 aa17.65■□□□□ 0.42
TRIM13-205ENST00000442421 PARP3Q9Y6F1 533 aa17.65■□□□□ 0.42
TRIM13-205ENST00000442421 HSP90AB1P08238 724 aaKnown RBP17.64■□□□□ 0.41
TRIM13-205ENST00000442421 APLP1P51693 650 aa17.64■□□□□ 0.41
TRIM13-205ENST00000442421 CABP4P57796 275 aa17.64■□□□□ 0.41
TRIM13-205ENST00000442421 PTCD1O75127 700 aaKnown RBP17.63■□□□□ 0.41
TRIM13-205ENST00000442421 PLEKHO1Q53GL0 409 aaPredicted RBP17.63■□□□□ 0.41
TRIM13-205ENST00000442421 ADAMTS7Q9UKP4 1686 aa17.62■□□□□ 0.41
TRIM13-205ENST00000442421 KCNA3P22001 575 aa17.62■□□□□ 0.41
TRIM13-205ENST00000442421 SRP68Q9UHB9 627 aaKnown RBP17.62■□□□□ 0.41
TRIM13-205ENST00000442421 C9orf131Q5VYM1 1079 aa17.61■□□□□ 0.41
TRIM13-205ENST00000442421 AEBP1Q8IUX7 1158 aa17.61■□□□□ 0.41
TRIM13-205ENST00000442421 AFDNP55196 1824 aaKnown RBP17.61■□□□□ 0.41
TRIM13-205ENST00000442421 PCNTO95613 3336 aa17.6■□□□□ 0.41
TRIM13-205ENST00000442421 CRKLP46109 303 aaKnown RBP17.6■□□□□ 0.41
TRIM13-205ENST00000442421 MTHFSP49914 203 aa17.6■□□□□ 0.41
TRIM13-205ENST00000442421 AMOTQ4VCS5 1084 aa17.6■□□□□ 0.41
TRIM13-205ENST00000442421 DNAJC5GQ8N7S2 189 aa17.6■□□□□ 0.41
TRIM13-205ENST00000442421 TNRC6CQ9HCJ0 1690 aaKnown RBP17.59■□□□□ 0.41
TRIM13-205ENST00000442421 KCPQ6ZWJ8 1503 aa17.59■□□□□ 0.41
TRIM13-205ENST00000442421 USP42Q9H9J4 1324 aaKnown RBP17.59■□□□□ 0.41
TRIM13-205ENST00000442421 DDR1Q08345 913 aa17.59■□□□□ 0.41
TRIM13-205ENST00000442421 FKBP8Q14318 412 aa17.59■□□□□ 0.41
TRIM13-205ENST00000442421 C1orf141Q5JVX7 400 aa17.59■□□□□ 0.41
TRIM13-205ENST00000442421 NFATC2IPQ8NCF5 419 aa17.59■□□□□ 0.41
TRIM13-205ENST00000442421 PIM2Q9P1W9 311 aa17.59■□□□□ 0.41
TRIM13-205ENST00000442421 CCDC88AQ3V6T2 1871 aa17.58■□□□□ 0.41
TRIM13-205ENST00000442421 DALRD3Q5D0E6 543 aaKnown RBP17.57■□□□□ 0.4
TRIM13-205ENST00000442421 PANK3Q9H999 370 aa17.57■□□□□ 0.4
TRIM13-205ENST00000442421 CHRNA5P30532 468 aa17.56■□□□□ 0.4
TRIM13-205ENST00000442421 HTRA3P83110 453 aa17.56■□□□□ 0.4
TRIM13-205ENST00000442421 C16orf71Q8IYS4 520 aaPredicted RBP17.56■□□□□ 0.4
TRIM13-205ENST00000442421 RBM46Q8TBY0 533 aaKnown RBP17.56■□□□□ 0.4
TRIM13-205ENST00000442421 RNF181Q9P0P0 153 aa17.56■□□□□ 0.4
TRIM13-205ENST00000442421 DLEC1Q9Y238 1755 aa17.56■□□□□ 0.4
TRIM13-205ENST00000442421 TRIM26Q12899 539 aaPredicted RBP17.55■□□□□ 0.4
TRIM13-205ENST00000442421 SULT6B1Q6IMI4 303 aa17.55■□□□□ 0.4
TRIM13-205ENST00000442421 INTS5Q6P9B9 1019 aaKnown RBP17.55■□□□□ 0.4
TRIM13-205ENST00000442421 TIMELESSQ9UNS1 1208 aa17.55■□□□□ 0.4
TRIM13-205ENST00000442421 KDM2BQ8NHM5 1336 aa17.53■□□□□ 0.4
TRIM13-205ENST00000442421 NRXN2Q9P2S2 1712 aa17.53■□□□□ 0.4
TRIM13-205ENST00000442421 POLRMTO00411 1230 aaKnown RBP17.53■□□□□ 0.4
TRIM13-205ENST00000442421 MORC1Q86VD1 984 aa17.53■□□□□ 0.4
TRIM13-205ENST00000442421 TIAM2Q8IVF5 1701 aa17.52■□□□□ 0.4
TRIM13-205ENST00000442421 DNAJC10Q8IXB1 793 aa17.52■□□□□ 0.4
TRIM13-205ENST00000442421 RRAGCQ9HB90 399 aa17.52■□□□□ 0.4
TRIM13-205ENST00000442421 HSPA5P11021 654 aaKnown RBP17.51■□□□□ 0.39
TRIM13-205ENST00000442421 TM4SF1P30408 202 aa17.51■□□□□ 0.39
TRIM13-205ENST00000442421 FSTL1Q12841 308 aa17.51■□□□□ 0.39
TRIM13-205ENST00000442421 USPL1Q5W0Q7 1092 aa17.51■□□□□ 0.39
TRIM13-205ENST00000442421 MRC1P22897 1456 aa17.5■□□□□ 0.39
TRIM13-205ENST00000442421 ZPR1O75312 459 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms