RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 ASAP1Q9ULH1 1129 aa19.58■□□□□ 0.72
PTPRN-206ENST00000442029 ATP6V1AP38606 617 aa19.57■□□□□ 0.72
PTPRN-206ENST00000442029 KDRP35968 1356 aa19.57■□□□□ 0.72
PTPRN-206ENST00000442029 ZNF831Q5JPB2 1677 aa19.56■□□□□ 0.72
PTPRN-206ENST00000442029 CABP4P57796 275 aa19.56■□□□□ 0.72
PTPRN-206ENST00000442029 MSL1Q68DK7 614 aa19.56■□□□□ 0.72
PTPRN-206ENST00000442029 ATG3Q9NT62 314 aa19.56■□□□□ 0.72
PTPRN-206ENST00000442029 PHF14O94880 888 aa19.55■□□□□ 0.72
PTPRN-206ENST00000442029 COL5A3P25940 1745 aaPredicted RBP19.54■□□□□ 0.72
PTPRN-206ENST00000442029 KDM6AO15550 1401 aaPredicted RBP19.54■□□□□ 0.72
PTPRN-206ENST00000442029 DIAPH1O60610 1272 aaKnown RBP19.54■□□□□ 0.72
PTPRN-206ENST00000442029 RBM42Q9BTD8 480 aaKnown RBP19.54■□□□□ 0.72
PTPRN-206ENST00000442029 NPC1L1Q9UHC9 1359 aa19.54■□□□□ 0.72
PTPRN-206ENST00000442029 LINC00116Q8NCU8 138 aa19.53■□□□□ 0.72
PTPRN-206ENST00000442029 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.52■□□□□ 0.72
PTPRN-206ENST00000442029 GNPATO15228 680 aa19.52■□□□□ 0.72
PTPRN-206ENST00000442029 HMOX1P09601 288 aa19.52■□□□□ 0.72
PTPRN-206ENST00000442029 SSFA2P28290 1259 aa19.52■□□□□ 0.72
PTPRN-206ENST00000442029 GPR162Q16538 588 aa19.52■□□□□ 0.72
PTPRN-206ENST00000442029 ITPK1Q13572 414 aa19.51■□□□□ 0.71
PTPRN-206ENST00000442029 PELP1Q8IZL8 1130 aaKnown RBP19.51■□□□□ 0.71
PTPRN-206ENST00000442029 AKAP4Q5JQC9 854 aa19.5■□□□□ 0.71
PTPRN-206ENST00000442029 MYH14Q7Z406 1995 aaKnown RBP19.49■□□□□ 0.71
PTPRN-206ENST00000442029 NFATC2IPQ8NCF5 419 aa19.48■□□□□ 0.71
PTPRN-206ENST00000442029 U2SURPO15042 1029 aaKnown RBP19.47■□□□□ 0.71
PTPRN-206ENST00000442029 SMIM5Q71RC9 77 aa19.47■□□□□ 0.71
PTPRN-206ENST00000442029 AMIGO3Q86WK7 504 aa19.47■□□□□ 0.71
PTPRN-206ENST00000442029 RTCBQ9Y3I0 505 aaKnown RBP19.47■□□□□ 0.71
PTPRN-206ENST00000442029 NLGN2Q8NFZ4 835 aa19.46■□□□□ 0.71
PTPRN-206ENST00000442029 C4AP0C0L4 1744 aa19.45■□□□□ 0.7
PTPRN-206ENST00000442029 TJP1Q07157 1748 aa19.45■□□□□ 0.7
PTPRN-206ENST00000442029 PTCD1O75127 700 aaKnown RBP19.45■□□□□ 0.7
PTPRN-206ENST00000442029 CFAP53Q96M91 514 aa19.45■□□□□ 0.7
PTPRN-206ENST00000442029 COL3A1P02461 1466 aaPredicted RBP19.45■□□□□ 0.7
PTPRN-206ENST00000442029 TRAPPC3LQ5T215 181 aa19.44■□□□□ 0.7
PTPRN-206ENST00000442029 SLC4A9Q96Q91 983 aa19.44■□□□□ 0.7
PTPRN-206ENST00000442029 CNTNAP4Q9C0A0 1308 aa19.44■□□□□ 0.7
PTPRN-206ENST00000442029 CICQ96RK0 1608 aaPredicted RBP19.43■□□□□ 0.7
PTPRN-206ENST00000442029 MTHFSDQ2M296 383 aaKnown RBP19.43■□□□□ 0.7
PTPRN-206ENST00000442029 RC3H1Q5TC82 1133 aaKnown RBP19.43■□□□□ 0.7
PTPRN-206ENST00000442029 SLC52A2Q9HAB3 445 aa19.43■□□□□ 0.7
PTPRN-206ENST00000442029 CD2APQ9Y5K6 639 aa19.43■□□□□ 0.7
PTPRN-206ENST00000442029 ADAMTS7Q9UKP4 1686 aa19.43■□□□□ 0.7
PTPRN-206ENST00000442029 RNMTO43148 476 aaKnown RBP19.42■□□□□ 0.7
PTPRN-206ENST00000442029 MRC1P22897 1456 aa19.41■□□□□ 0.7
PTPRN-206ENST00000442029 ADRA2BP18089 450 aa19.41■□□□□ 0.7
PTPRN-206ENST00000442029 LGR6Q9HBX8 967 aa19.41■□□□□ 0.7
PTPRN-206ENST00000442029 UTRNP46939 3433 aa19.41■□□□□ 0.7
PTPRN-206ENST00000442029 RFC4P35249 363 aa19.4■□□□□ 0.7
PTPRN-206ENST00000442029 GRIN3BO60391 1043 aa19.39■□□□□ 0.69
PTPRN-206ENST00000442029 RPS6KA4O75676 772 aa19.39■□□□□ 0.69
PTPRN-206ENST00000442029 GAS2L2Q8NHY3 880 aa19.39■□□□□ 0.69
PTPRN-206ENST00000442029 NUDCQ9Y266 331 aa19.39■□□□□ 0.69
PTPRN-206ENST00000442029 UBR2Q8IWV8 1755 aa19.39■□□□□ 0.69
PTPRN-206ENST00000442029 KIF13BQ9NQT8 1826 aa19.39■□□□□ 0.69
PTPRN-206ENST00000442029 SIPA1L3O60292 1781 aaPredicted RBP19.38■□□□□ 0.69
PTPRN-206ENST00000442029 CRKLP46109 303 aaKnown RBP19.38■□□□□ 0.69
PTPRN-206ENST00000442029 NLGN1Q8N2Q7 840 aa19.38■□□□□ 0.69
PTPRN-206ENST00000442029 ARHGEF1Q92888 912 aaKnown RBP19.38■□□□□ 0.69
PTPRN-206ENST00000442029 MMP10P09238 476 aa19.37■□□□□ 0.69
PTPRN-206ENST00000442029 N4BP2Q86UW6 1770 aaPredicted RBP19.36■□□□□ 0.69
PTPRN-206ENST00000442029 GNAT3A8MTJ3 354 aa19.35■□□□□ 0.69
PTPRN-206ENST00000442029 YBX3P16989 372 aaKnown RBP eCLIP19.35■□□□□ 0.69
PTPRN-206ENST00000442029 PPP2R1AP30153 589 aa19.35■□□□□ 0.69
PTPRN-206ENST00000442029 TEFQ10587 303 aa19.35■□□□□ 0.69
PTPRN-206ENST00000442029 SLC39A6Q13433 755 aa19.35■□□□□ 0.69
PTPRN-206ENST00000442029 TTC5Q8N0Z6 440 aa19.35■□□□□ 0.69
PTPRN-206ENST00000442029 ZNF784Q8NCA9 323 aaPredicted RBP19.35■□□□□ 0.69
PTPRN-206ENST00000442029 DNAJC10Q8IXB1 793 aa19.34■□□□□ 0.69
PTPRN-206ENST00000442029 KCPQ6ZWJ8 1503 aa19.34■□□□□ 0.69
PTPRN-206ENST00000442029 U2AF1L5P0DN76 240 aaPredicted RBP19.33■□□□□ 0.68
PTPRN-206ENST00000442029 PRKAR2BP31323 418 aa19.33■□□□□ 0.68
PTPRN-206ENST00000442029 U2AF1Q01081 240 aaKnown RBP eCLIP19.33■□□□□ 0.68
PTPRN-206ENST00000442029 GYS1P13807 737 aa19.32■□□□□ 0.68
PTPRN-206ENST00000442029 CCDC87Q9NVE4 849 aa19.32■□□□□ 0.68
PTPRN-206ENST00000442029 PARP3Q9Y6F1 533 aa19.32■□□□□ 0.68
PTPRN-206ENST00000442029 GOLGB1Q14789 3259 aaKnown RBP19.32■□□□□ 0.68
PTPRN-206ENST00000442029 RSPH6AQ9H0K4 717 aa19.31■□□□□ 0.68
PTPRN-206ENST00000442029 DLG5Q8TDM6 1919 aa19.3■□□□□ 0.68
PTPRN-206ENST00000442029 INTS5Q6P9B9 1019 aaKnown RBP19.3■□□□□ 0.68
PTPRN-206ENST00000442029 VSIG10Q8N0Z9 540 aa19.3■□□□□ 0.68
PTPRN-206ENST00000442029 WWC3Q9ULE0 1092 aa19.3■□□□□ 0.68
PTPRN-206ENST00000442029 KIAA1551Q9HCM1 1747 aa19.3■□□□□ 0.68
PTPRN-206ENST00000442029 USP42Q9H9J4 1324 aaKnown RBP19.29■□□□□ 0.68
PTPRN-206ENST00000442029 BRCA1P38398 1863 aaKnown RBP19.29■□□□□ 0.68
PTPRN-206ENST00000442029 ZPR1O75312 459 aa19.29■□□□□ 0.68
PTPRN-206ENST00000442029 SRP68Q9UHB9 627 aaKnown RBP19.29■□□□□ 0.68
PTPRN-206ENST00000442029 CYP19A1P11511 503 aaPredicted RBP19.28■□□□□ 0.68
PTPRN-206ENST00000442029 IL17REQ8NFR9 667 aa19.28■□□□□ 0.68
PTPRN-206ENST00000442029 PHACTR3Q96KR7 559 aa19.28■□□□□ 0.68
PTPRN-206ENST00000442029 AFDNP55196 1824 aaKnown RBP19.28■□□□□ 0.68
PTPRN-206ENST00000442029 C10orf71Q711Q0 1435 aa19.27■□□□□ 0.68
PTPRN-206ENST00000442029 FCHSD2O94868 740 aa19.27■□□□□ 0.68
PTPRN-206ENST00000442029 NEFMP07197 916 aa19.27■□□□□ 0.68
PTPRN-206ENST00000442029 RTF1Q92541 710 aaKnown RBP19.27■□□□□ 0.68
PTPRN-206ENST00000442029 SOS1Q07889 1333 aaPredicted RBP19.26■□□□□ 0.67
PTPRN-206ENST00000442029 STARD3NLO95772 234 aa19.26■□□□□ 0.67
PTPRN-206ENST00000442029 TGFB2P61812 414 aa19.26■□□□□ 0.67
PTPRN-206ENST00000442029 ZNF790Q6PG37 636 aa19.26■□□□□ 0.67
PTPRN-206ENST00000442029 COL15A1P39059 1388 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms