RNA–Protein interactions for RNA: ENST00000441986.5

HDAC9-215, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-215ENST00000441986 TULP1O00294 542 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-215ENST00000441986 HMGB2P26583 209 aaKnown RBP8.77□□□□□ -1.01
HDAC9-215ENST00000441986 IRX5P78411 483 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-215ENST00000441986 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.77□□□□□ -1.01
HDAC9-215ENST00000441986 DDX54Q8TDD1 881 aaKnown RBP8.77□□□□□ -1.01
HDAC9-215ENST00000441986 L3MBTL2Q969R5 705 aa8.77□□□□□ -1.01
HDAC9-215ENST00000441986 GPHNQ9NQX3 736 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-215ENST00000441986 LRRC4BQ9NT99 713 aa8.77□□□□□ -1.01
HDAC9-215ENST00000441986 COL18A1P39060 1754 aa8.76□□□□□ -1.01
HDAC9-215ENST00000441986 MYOM1P52179 1685 aa8.76□□□□□ -1.01
HDAC9-215ENST00000441986 TESPA1A2RU30 521 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-215ENST00000441986 ZNF827Q17R98 1081 aa8.76□□□□□ -1.01
HDAC9-215ENST00000441986 DPY19L2Q6NUT2 758 aa8.76□□□□□ -1.01
HDAC9-215ENST00000441986 MICALL2Q8IY33 904 aa8.76□□□□□ -1.01
HDAC9-215ENST00000441986 ANKRD24Q8TF21 1146 aa8.76□□□□□ -1.01
HDAC9-215ENST00000441986 ERBB3P21860 1342 aa8.76□□□□□ -1.01
HDAC9-215ENST00000441986 TNS2Q63HR2 1409 aa8.75□□□□□ -1.01
HDAC9-215ENST00000441986 HDGFL2Q7Z4V5 671 aaPredicted RBP8.75□□□□□ -1.01
HDAC9-215ENST00000441986 SYTL4Q96C24 671 aaPredicted RBP8.75□□□□□ -1.01
HDAC9-215ENST00000441986 USP31Q70CQ4 1352 aa8.74□□□□□ -1.01
HDAC9-215ENST00000441986 SEMA3EO15041 775 aa8.74□□□□□ -1.01
HDAC9-215ENST00000441986 PRIM1P49642 420 aaKnown RBP8.74□□□□□ -1.01
HDAC9-215ENST00000441986 PPP1R15BQ5SWA1 713 aa8.74□□□□□ -1.01
HDAC9-215ENST00000441986 TMC1Q8TDI8 760 aa8.74□□□□□ -1.01
HDAC9-215ENST00000441986 OCEL1Q9H607 264 aa8.74□□□□□ -1.01
HDAC9-215ENST00000441986 AKAP12Q02952 1782 aa8.73□□□□□ -1.01
HDAC9-215ENST00000441986 NME9Q86XW9 330 aa8.73□□□□□ -1.01
HDAC9-215ENST00000441986 IP6K1Q92551 441 aa8.73□□□□□ -1.01
HDAC9-215ENST00000441986 TMEM121BQ9BXQ6 578 aaPredicted RBP8.73□□□□□ -1.01
HDAC9-215ENST00000441986 TERF2IPQ9NYB0 399 aa8.73□□□□□ -1.01
HDAC9-215ENST00000441986 PNPLA7Q6ZV29 1317 aa8.73□□□□□ -1.01
HDAC9-215ENST00000441986 ROCK2O75116 1388 aaKnown RBP8.73□□□□□ -1.01
HDAC9-215ENST00000441986 PIK3C2AO00443 1686 aa8.72□□□□□ -1.01
HDAC9-215ENST00000441986 NLGN2Q8NFZ4 835 aa8.72□□□□□ -1.01
HDAC9-215ENST00000441986 CHD4Q14839 1912 aa8.72□□□□□ -1.01
HDAC9-215ENST00000441986 ABCC6O95255 1503 aa8.71□□□□□ -1.01
HDAC9-215ENST00000441986 KCNQ4P56696 695 aa8.71□□□□□ -1.02
HDAC9-215ENST00000441986 NEUROD1Q13562 356 aa8.71□□□□□ -1.02
HDAC9-215ENST00000441986 FLAD1Q8NFF5 587 aa8.71□□□□□ -1.02
HDAC9-215ENST00000441986 ZCRB1Q8TBF4 217 aaKnown RBP8.71□□□□□ -1.02
HDAC9-215ENST00000441986 LTV1Q96GA3 475 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-215ENST00000441986 SLC12A5Q9H2X9 1139 aa8.71□□□□□ -1.02
HDAC9-215ENST00000441986 CCNL1Q9UK58 526 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-215ENST00000441986 CD2APQ9Y5K6 639 aa8.71□□□□□ -1.02
HDAC9-215ENST00000441986 TRPM1Q7Z4N2 1603 aa8.71□□□□□ -1.02
HDAC9-215ENST00000441986 QRICH2Q9H0J4 1663 aa8.71□□□□□ -1.02
HDAC9-215ENST00000441986 NFAT5O94916 1531 aa8.7□□□□□ -1.02
HDAC9-215ENST00000441986 NHSQ6T4R5 1651 aa8.7□□□□□ -1.02
HDAC9-215ENST00000441986 YBX3P16989 372 aaKnown RBP eCLIP8.7□□□□□ -1.02
HDAC9-215ENST00000441986 COL23A1Q86Y22 540 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-215ENST00000441986 PUS7Q96PZ0 661 aaKnown RBP8.7□□□□□ -1.02
HDAC9-215ENST00000441986 GPBP1L1Q9HC44 474 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-215ENST00000441986 BOLA1Q9Y3E2 137 aa8.7□□□□□ -1.02
HDAC9-215ENST00000441986 RGPD5Q99666 1765 aa8.7□□□□□ -1.02
HDAC9-215ENST00000441986 ANKRD36BQ8N2N9 1353 aa8.7□□□□□ -1.02
HDAC9-215ENST00000441986 AMPHP49418 695 aa8.69□□□□□ -1.02
HDAC9-215ENST00000441986 FOXK1P85037 733 aa8.69□□□□□ -1.02
HDAC9-215ENST00000441986 DSG2Q14126 1118 aa8.69□□□□□ -1.02
HDAC9-215ENST00000441986 TMC2Q8TDI7 906 aa8.69□□□□□ -1.02
HDAC9-215ENST00000441986 COG3Q96JB2 828 aa8.69□□□□□ -1.02
HDAC9-215ENST00000441986 SIN3AQ96ST3 1273 aa8.69□□□□□ -1.02
HDAC9-215ENST00000441986 USP47Q96K76 1375 aa8.69□□□□□ -1.02
HDAC9-215ENST00000441986 SBNO2Q9Y2G9 1366 aa8.69□□□□□ -1.02
HDAC9-215ENST00000441986 WNK3Q9BYP7 1800 aa8.68□□□□□ -1.02
HDAC9-215ENST00000441986 PLCG2P16885 1265 aa8.68□□□□□ -1.02
HDAC9-215ENST00000441986 SMYD5Q6GMV2 418 aa8.68□□□□□ -1.02
HDAC9-215ENST00000441986 CARD11Q9BXL7 1154 aa8.68□□□□□ -1.02
HDAC9-215ENST00000441986 CGNL1Q0VF96 1302 aa8.68□□□□□ -1.02
HDAC9-215ENST00000441986 G3V3G9 751 aa8.67□□□□□ -1.02
HDAC9-215ENST00000441986 HSPA6P17066 643 aa8.67□□□□□ -1.02
HDAC9-215ENST00000441986 HOXC9P31274 260 aa8.67□□□□□ -1.02
HDAC9-215ENST00000441986 PAPPAQ13219 1627 aa8.67□□□□□ -1.02
HDAC9-215ENST00000441986 EDC4Q6P2E9 1401 aaKnown RBP8.67□□□□□ -1.02
HDAC9-215ENST00000441986 RAPGEF4Q8WZA2 1011 aa8.67□□□□□ -1.02
HDAC9-215ENST00000441986 BTAF1O14981 1849 aa8.66□□□□□ -1.02
HDAC9-215ENST00000441986 KIF3CO14782 793 aa8.66□□□□□ -1.02
HDAC9-215ENST00000441986 L3MBTL3Q96JM7 780 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-215ENST00000441986 KAT6BQ8WYB5 2073 aa8.65□□□□□ -1.02
HDAC9-215ENST00000441986 MAP3K19Q56UN5 1328 aa8.65□□□□□ -1.02
HDAC9-215ENST00000441986 TATP17735 454 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-215ENST00000441986 NBPF6Q5VWK0 638 aa8.65□□□□□ -1.02
HDAC9-215ENST00000441986 MSL1Q68DK7 614 aa8.65□□□□□ -1.02
HDAC9-215ENST00000441986 MPRIPQ6WCQ1 1025 aa8.65□□□□□ -1.02
HDAC9-215ENST00000441986 ZC3H15Q8WU90 426 aaKnown RBP8.65□□□□□ -1.02
HDAC9-215ENST00000441986 NBPF4Q96M43 638 aa8.65□□□□□ -1.02
HDAC9-215ENST00000441986 EMILIN3Q9NT22 766 aa8.65□□□□□ -1.02
HDAC9-215ENST00000441986 CD163L1Q9NR16 1453 aa8.64□□□□□ -1.03
HDAC9-215ENST00000441986 ATP10DQ9P241 1426 aa8.64□□□□□ -1.03
HDAC9-215ENST00000441986 FBLN1P23142 703 aa8.64□□□□□ -1.03
HDAC9-215ENST00000441986 ZNF526Q8TF50 670 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-215ENST00000441986 SMARCC1Q92922 1105 aaPredicted RBP8.64□□□□□ -1.03
HDAC9-215ENST00000441986 DCBLD2Q96PD2 775 aa8.64□□□□□ -1.03
HDAC9-215ENST00000441986 NSD2O96028 1365 aa8.63□□□□□ -1.03
HDAC9-215ENST00000441986 C2orf72A6NCS6 295 aa8.63□□□□□ -1.03
HDAC9-215ENST00000441986 SPDYE16A6NNV3 312 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-215ENST00000441986 PDIA6Q15084 440 aa8.63□□□□□ -1.03
HDAC9-215ENST00000441986 AK7Q96M32 723 aa8.63□□□□□ -1.03
HDAC9-215ENST00000441986 QSER1Q2KHR3 1735 aa8.63□□□□□ -1.03
HDAC9-215ENST00000441986 A0A1W2PP64 1363 aa8.62□□□□□ -1.03
HDAC9-215ENST00000441986 DPYSL4O14531 572 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms