RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 RBM42Q9BTD8 480 aaKnown RBP27.4■■□□□ 1.98
UBE2F-215ENST00000441728 RTCBQ9Y3I0 505 aaKnown RBP27.4■■□□□ 1.98
UBE2F-215ENST00000441728 ATG3Q9NT62 314 aa27.39■■□□□ 1.98
UBE2F-215ENST00000441728 GOLGB1Q14789 3259 aaKnown RBP27.38■■□□□ 1.97
UBE2F-215ENST00000441728 PLEKHO1Q53GL0 409 aaPredicted RBP27.38■■□□□ 1.97
UBE2F-215ENST00000441728 TRAPPC3LQ5T215 181 aa27.38■■□□□ 1.97
UBE2F-215ENST00000441728 PCGF6Q9BYE7 350 aa27.38■■□□□ 1.97
UBE2F-215ENST00000441728 MMP10P09238 476 aa27.37■■□□□ 1.97
UBE2F-215ENST00000441728 PLEKHG2Q9H7P9 1386 aa27.36■■□□□ 1.97
UBE2F-215ENST00000441728 ERVV-2B6SEH9 535 aa27.36■■□□□ 1.97
UBE2F-215ENST00000441728 DCAF5Q96JK2 942 aa27.35■■□□□ 1.97
UBE2F-215ENST00000441728 CLSPNQ9HAW4 1339 aa27.35■■□□□ 1.97
UBE2F-215ENST00000441728 CABP4P57796 275 aa27.34■■□□□ 1.97
UBE2F-215ENST00000441728 EIF4G2P78344 907 aaKnown RBP eCLIP27.34■■□□□ 1.97
UBE2F-215ENST00000441728 ZNF530Q6P9A1 599 aaPredicted RBP27.34■■□□□ 1.97
UBE2F-215ENST00000441728 NLGN1Q8N2Q7 840 aa27.34■■□□□ 1.97
UBE2F-215ENST00000441728 AMOTQ4VCS5 1084 aa27.33■■□□□ 1.97
UBE2F-215ENST00000441728 C1orf141Q5JVX7 400 aa27.33■■□□□ 1.97
UBE2F-215ENST00000441728 RFC4P35249 363 aa27.31■■□□□ 1.96
UBE2F-215ENST00000441728 PANK3Q9H999 370 aa27.31■■□□□ 1.96
UBE2F-215ENST00000441728 ADCY9O60503 1353 aa27.31■■□□□ 1.96
UBE2F-215ENST00000441728 ADRA2BP18089 450 aa27.3■■□□□ 1.96
UBE2F-215ENST00000441728 MORC1Q86VD1 984 aa27.3■■□□□ 1.96
UBE2F-215ENST00000441728 CCDC87Q9NVE4 849 aa27.3■■□□□ 1.96
UBE2F-215ENST00000441728 BCS1LQ9Y276 419 aa27.29■■□□□ 1.96
UBE2F-215ENST00000441728 KDRP35968 1356 aa27.28■■□□□ 1.96
UBE2F-215ENST00000441728 MTHFSP49914 203 aa27.28■■□□□ 1.96
UBE2F-215ENST00000441728 TGFB2P61812 414 aa27.28■■□□□ 1.96
UBE2F-215ENST00000441728 RC3H1Q5TC82 1133 aaKnown RBP27.28■■□□□ 1.96
UBE2F-215ENST00000441728 PARP3Q9Y6F1 533 aa27.28■■□□□ 1.96
UBE2F-215ENST00000441728 CICQ96RK0 1608 aaPredicted RBP27.27■■□□□ 1.96
UBE2F-215ENST00000441728 CNTNAP4Q9C0A0 1308 aa27.26■■□□□ 1.95
UBE2F-215ENST00000441728 ARHGEF1Q92888 912 aaKnown RBP27.26■■□□□ 1.95
UBE2F-215ENST00000441728 RPS6KA4O75676 772 aa27.25■■□□□ 1.95
UBE2F-215ENST00000441728 HSPA5P11021 654 aaKnown RBP27.25■■□□□ 1.95
UBE2F-215ENST00000441728 HSPA6P17066 643 aa27.25■■□□□ 1.95
UBE2F-215ENST00000441728 PTCD1O75127 700 aaKnown RBP27.24■■□□□ 1.95
UBE2F-215ENST00000441728 PXDNLA1KZ92 1463 aa27.24■■□□□ 1.95
UBE2F-215ENST00000441728 A0A0G2JLW4 131 aa27.23■■□□□ 1.95
UBE2F-215ENST00000441728 ARHGAP27Q6ZUM4 889 aa27.23■■□□□ 1.95
UBE2F-215ENST00000441728 ZNF831Q5JPB2 1677 aa27.23■■□□□ 1.95
UBE2F-215ENST00000441728 FCHSD2O94868 740 aa27.22■■□□□ 1.95
UBE2F-215ENST00000441728 SLC4A9Q96Q91 983 aa27.22■■□□□ 1.95
UBE2F-215ENST00000441728 KNSTRNQ9Y448 316 aa27.22■■□□□ 1.95
UBE2F-215ENST00000441728 GYS1P13807 737 aa27.21■■□□□ 1.95
UBE2F-215ENST00000441728 KDM6AO15550 1401 aaPredicted RBP27.21■■□□□ 1.95
UBE2F-215ENST00000441728 SULT6B1Q6IMI4 303 aa27.2■■□□□ 1.94
UBE2F-215ENST00000441728 C10orf71Q711Q0 1435 aa27.2■■□□□ 1.94
UBE2F-215ENST00000441728 N4BP2Q86UW6 1770 aaPredicted RBP27.2■■□□□ 1.94
UBE2F-215ENST00000441728 AEBP1Q8IUX7 1158 aa27.19■■□□□ 1.94
UBE2F-215ENST00000441728 C4AP0C0L4 1744 aa27.19■■□□□ 1.94
UBE2F-215ENST00000441728 COL5A3P25940 1745 aaPredicted RBP27.19■■□□□ 1.94
UBE2F-215ENST00000441728 KIF13BQ9NQT8 1826 aa27.18■■□□□ 1.94
UBE2F-215ENST00000441728 DPEP1P16444 411 aa27.18■■□□□ 1.94
UBE2F-215ENST00000441728 NFATC2IPQ8NCF5 419 aa27.18■■□□□ 1.94
UBE2F-215ENST00000441728 CRKLP46109 303 aaKnown RBP27.17■■□□□ 1.94
UBE2F-215ENST00000441728 KIF3CO14782 793 aa27.14■■□□□ 1.94
UBE2F-215ENST00000441728 IFFO2Q5TF58 517 aa27.13■■□□□ 1.93
UBE2F-215ENST00000441728 PIM2Q9P1W9 311 aa27.13■■□□□ 1.93
UBE2F-215ENST00000441728 CCER1Q8TC90 406 aaPredicted RBP27.12■■□□□ 1.93
UBE2F-215ENST00000441728 KIAA1551Q9HCM1 1747 aa27.11■■□□□ 1.93
UBE2F-215ENST00000441728 ZPR1O75312 459 aa27.11■■□□□ 1.93
UBE2F-215ENST00000441728 C16orf71Q8IYS4 520 aaPredicted RBP27.11■■□□□ 1.93
UBE2F-215ENST00000441728 SRP68Q9UHB9 627 aaKnown RBP27.11■■□□□ 1.93
UBE2F-215ENST00000441728 AKAP4Q5JQC9 854 aa27.1■■□□□ 1.93
UBE2F-215ENST00000441728 USP42Q9H9J4 1324 aaKnown RBP27.1■■□□□ 1.93
UBE2F-215ENST00000441728 TOMM70O94826 608 aa27.09■■□□□ 1.93
UBE2F-215ENST00000441728 DALRD3Q5D0E6 543 aaKnown RBP27.09■■□□□ 1.93
UBE2F-215ENST00000441728 MYH14Q7Z406 1995 aaKnown RBP27.09■■□□□ 1.93
UBE2F-215ENST00000441728 IL13P35225 146 aa27.08■■□□□ 1.93
UBE2F-215ENST00000441728 APLP1P51693 650 aa27.08■■□□□ 1.93
UBE2F-215ENST00000441728 FKBP8Q14318 412 aa27.08■■□□□ 1.93
UBE2F-215ENST00000441728 C9orf131Q5VYM1 1079 aa27.07■■□□□ 1.92
UBE2F-215ENST00000441728 SLC52A2Q9HAB3 445 aa27.06■■□□□ 1.92
UBE2F-215ENST00000441728 SCN11AQ9UI33 1791 aa27.05■■□□□ 1.92
UBE2F-215ENST00000441728 DNAJC10Q8IXB1 793 aa27.04■■□□□ 1.92
UBE2F-215ENST00000441728 TJP1Q07157 1748 aa27.04■■□□□ 1.92
UBE2F-215ENST00000441728 HMOX1P09601 288 aa27.03■■□□□ 1.92
UBE2F-215ENST00000441728 DDR1Q08345 913 aa27.03■■□□□ 1.92
UBE2F-215ENST00000441728 INTS5Q6P9B9 1019 aaKnown RBP27.03■■□□□ 1.92
UBE2F-215ENST00000441728 KDM2BQ8NHM5 1336 aa27.03■■□□□ 1.92
UBE2F-215ENST00000441728 NMRK2Q9NPI5 230 aa27.03■■□□□ 1.92
UBE2F-215ENST00000441728 KCNA3P22001 575 aa27.02■■□□□ 1.92
UBE2F-215ENST00000441728 RNF181Q9P0P0 153 aa27.02■■□□□ 1.92
UBE2F-215ENST00000441728 CEP350Q5VT06 3117 aa27.02■■□□□ 1.92
UBE2F-215ENST00000441728 BRCA1P38398 1863 aaKnown RBP27.02■■□□□ 1.92
UBE2F-215ENST00000441728 ARFGEF1Q9Y6D6 1849 aa27.02■■□□□ 1.92
UBE2F-215ENST00000441728 USPL1Q5W0Q7 1092 aa27.01■■□□□ 1.91
UBE2F-215ENST00000441728 RNMTO43148 476 aaKnown RBP27■■□□□ 1.91
UBE2F-215ENST00000441728 CHRNA5P30532 468 aa27■■□□□ 1.91
UBE2F-215ENST00000441728 LGR6Q9HBX8 967 aa27■■□□□ 1.91
UBE2F-215ENST00000441728 POLRMTO00411 1230 aaKnown RBP26.99■■□□□ 1.91
UBE2F-215ENST00000441728 SOS1Q07889 1333 aaPredicted RBP26.98■■□□□ 1.91
UBE2F-215ENST00000441728 SLC39A6Q13433 755 aa26.98■■□□□ 1.91
UBE2F-215ENST00000441728 DIAPH1O60610 1272 aaKnown RBP26.97■■□□□ 1.91
UBE2F-215ENST00000441728 AMER1Q5JTC6 1135 aaPredicted RBP26.97■■□□□ 1.91
UBE2F-215ENST00000441728 TTC5Q8N0Z6 440 aa26.97■■□□□ 1.91
UBE2F-215ENST00000441728 CYP19A1P11511 503 aaPredicted RBP26.96■■□□□ 1.91
UBE2F-215ENST00000441728 TM4SF1P30408 202 aa26.96■■□□□ 1.91
UBE2F-215ENST00000441728 RBM46Q8TBY0 533 aaKnown RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms