RNA–Protein interactions for RNA: ENST00000441460.5

RFTN1-204, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-204ENST00000441460 SMIM5Q71RC9 77 aa18.21■□□□□ 0.51
RFTN1-204ENST00000441460 COL24A1Q17RW2 1714 aa18.2■□□□□ 0.5
RFTN1-204ENST00000441460 ATP6V1AP38606 617 aa18.2■□□□□ 0.5
RFTN1-204ENST00000441460 NFATC2IPQ8NCF5 419 aa18.2■□□□□ 0.5
RFTN1-204ENST00000441460 LGR6Q9HBX8 967 aa18.2■□□□□ 0.5
RFTN1-204ENST00000441460 ARXQ96QS3 562 aa18.19■□□□□ 0.5
RFTN1-204ENST00000441460 FHDC1Q9C0D6 1143 aaPredicted RBP18.19■□□□□ 0.5
RFTN1-204ENST00000441460 SCN11AQ9UI33 1791 aa18.19■□□□□ 0.5
RFTN1-204ENST00000441460 AK7Q96M32 723 aa18.18■□□□□ 0.5
RFTN1-204ENST00000441460 SYT17Q9BSW7 474 aa18.18■□□□□ 0.5
RFTN1-204ENST00000441460 UBR3Q6ZT12 1888 aa18.18■□□□□ 0.5
RFTN1-204ENST00000441460 RNMTO43148 476 aaKnown RBP18.17■□□□□ 0.5
RFTN1-204ENST00000441460 MSH5O43196 834 aa18.17■□□□□ 0.5
RFTN1-204ENST00000441460 MRC1P22897 1456 aa18.17■□□□□ 0.5
RFTN1-204ENST00000441460 UTRNP46939 3433 aa18.17■□□□□ 0.5
RFTN1-204ENST00000441460 ADAMTS7Q9UKP4 1686 aa18.16■□□□□ 0.5
RFTN1-204ENST00000441460 HMGB2P26583 209 aaKnown RBP18.16■□□□□ 0.5
RFTN1-204ENST00000441460 CFAP53Q96M91 514 aa18.16■□□□□ 0.5
RFTN1-204ENST00000441460 RBM42Q9BTD8 480 aaKnown RBP18.16■□□□□ 0.5
RFTN1-204ENST00000441460 SLC52A2Q9HAB3 445 aa18.16■□□□□ 0.5
RFTN1-204ENST00000441460 ZNF831Q5JPB2 1677 aa18.15■□□□□ 0.5
RFTN1-204ENST00000441460 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.15■□□□□ 0.5
RFTN1-204ENST00000441460 PHF14O94880 888 aa18.15■□□□□ 0.5
RFTN1-204ENST00000441460 MSL1Q68DK7 614 aa18.15■□□□□ 0.5
RFTN1-204ENST00000441460 RSPH6AQ9H0K4 717 aa18.15■□□□□ 0.5
RFTN1-204ENST00000441460 PTCD1O75127 700 aaKnown RBP18.14■□□□□ 0.49
RFTN1-204ENST00000441460 FLAD1Q8NFF5 587 aa18.14■□□□□ 0.49
RFTN1-204ENST00000441460 PHACTR3Q96KR7 559 aa18.14■□□□□ 0.49
RFTN1-204ENST00000441460 MAP3K5Q99683 1374 aa18.14■□□□□ 0.49
RFTN1-204ENST00000441460 COL5A3P25940 1745 aaPredicted RBP18.13■□□□□ 0.49
RFTN1-204ENST00000441460 GNPATO15228 680 aa18.13■□□□□ 0.49
RFTN1-204ENST00000441460 SSFA2P28290 1259 aa18.13■□□□□ 0.49
RFTN1-204ENST00000441460 POLD1P28340 1107 aa18.13■□□□□ 0.49
RFTN1-204ENST00000441460 PRKAR2BP31323 418 aa18.13■□□□□ 0.49
RFTN1-204ENST00000441460 VIRMAQ69YN4 1812 aaKnown RBP18.12■□□□□ 0.49
RFTN1-204ENST00000441460 DDX10Q13206 875 aaKnown RBP18.11■□□□□ 0.49
RFTN1-204ENST00000441460 SLC39A6Q13433 755 aa18.11■□□□□ 0.49
RFTN1-204ENST00000441460 IL17REQ8NFR9 667 aa18.11■□□□□ 0.49
RFTN1-204ENST00000441460 NUDCQ9Y266 331 aa18.11■□□□□ 0.49
RFTN1-204ENST00000441460 U2AF1L5P0DN76 240 aaPredicted RBP18.1■□□□□ 0.49
RFTN1-204ENST00000441460 U2AF1Q01081 240 aaKnown RBP eCLIP18.1■□□□□ 0.49
RFTN1-204ENST00000441460 GAS2L2Q8NHY3 880 aa18.1■□□□□ 0.49
RFTN1-204ENST00000441460 MYH14Q7Z406 1995 aaKnown RBP18.1■□□□□ 0.49
RFTN1-204ENST00000441460 TJP1Q07157 1748 aa18.09■□□□□ 0.49
RFTN1-204ENST00000441460 CNTNAP4Q9C0A0 1308 aa18.09■□□□□ 0.49
RFTN1-204ENST00000441460 RC3H1Q5TC82 1133 aaKnown RBP18.09■□□□□ 0.49
RFTN1-204ENST00000441460 CICQ96RK0 1608 aaPredicted RBP18.09■□□□□ 0.49
RFTN1-204ENST00000441460 KCPQ6ZWJ8 1503 aa18.08■□□□□ 0.49
RFTN1-204ENST00000441460 GNAT3A8MTJ3 354 aa18.08■□□□□ 0.48
RFTN1-204ENST00000441460 KLHL34Q8N239 644 aa18.08■□□□□ 0.48
RFTN1-204ENST00000441460 FCHSD2O94868 740 aa18.07■□□□□ 0.48
RFTN1-204ENST00000441460 NLGN2Q8NFZ4 835 aa18.07■□□□□ 0.48
RFTN1-204ENST00000441460 RTCBQ9Y3I0 505 aaKnown RBP18.07■□□□□ 0.48
RFTN1-204ENST00000441460 CEMIPQ8WUJ3 1361 aa18.06■□□□□ 0.48
RFTN1-204ENST00000441460 RPS6KA4O75676 772 aa18.06■□□□□ 0.48
RFTN1-204ENST00000441460 CRKLP46109 303 aaKnown RBP18.06■□□□□ 0.48
RFTN1-204ENST00000441460 DNAJC10Q8IXB1 793 aa18.06■□□□□ 0.48
RFTN1-204ENST00000441460 GOLGB1Q14789 3259 aaKnown RBP18.06■□□□□ 0.48
RFTN1-204ENST00000441460 TRAPPC3LQ5T215 181 aa18.05■□□□□ 0.48
RFTN1-204ENST00000441460 ARHGEF1Q92888 912 aaKnown RBP18.05■□□□□ 0.48
RFTN1-204ENST00000441460 INTS5Q6P9B9 1019 aaKnown RBP18.04■□□□□ 0.48
RFTN1-204ENST00000441460 SIPA1L3O60292 1781 aaPredicted RBP18.04■□□□□ 0.48
RFTN1-204ENST00000441460 UBR2Q8IWV8 1755 aa18.04■□□□□ 0.48
RFTN1-204ENST00000441460 ADRA2BP18089 450 aa18.03■□□□□ 0.48
RFTN1-204ENST00000441460 RALBP1Q15311 655 aa18.03■□□□□ 0.48
RFTN1-204ENST00000441460 DCAF8L1A6NGE4 600 aa18.02■□□□□ 0.48
RFTN1-204ENST00000441460 CYP19A1P11511 503 aaPredicted RBP18.02■□□□□ 0.48
RFTN1-204ENST00000441460 TEFQ10587 303 aa18.02■□□□□ 0.48
RFTN1-204ENST00000441460 C4AP0C0L4 1744 aa18.01■□□□□ 0.47
RFTN1-204ENST00000441460 GYS1P13807 737 aa18.01■□□□□ 0.47
RFTN1-204ENST00000441460 ZNF790Q6PG37 636 aa18.01■□□□□ 0.47
RFTN1-204ENST00000441460 ZNF496Q96IT1 587 aaPredicted RBP18.01■□□□□ 0.47
RFTN1-204ENST00000441460 PLEKHF1Q96S99 279 aa18.01■□□□□ 0.47
RFTN1-204ENST00000441460 KCNQ3O43525 872 aa18■□□□□ 0.47
RFTN1-204ENST00000441460 DCTN1Q14203 1278 aa18■□□□□ 0.47
RFTN1-204ENST00000441460 MCM10Q7L590 875 aa18■□□□□ 0.47
RFTN1-204ENST00000441460 VSIG10Q8N0Z9 540 aa18■□□□□ 0.47
RFTN1-204ENST00000441460 MMP10P09238 476 aa17.99■□□□□ 0.47
RFTN1-204ENST00000441460 RFC4P35249 363 aa17.99■□□□□ 0.47
RFTN1-204ENST00000441460 TTC5Q8N0Z6 440 aa17.99■□□□□ 0.47
RFTN1-204ENST00000441460 CCDC87Q9NVE4 849 aa17.99■□□□□ 0.47
RFTN1-204ENST00000441460 SRP68Q9UHB9 627 aaKnown RBP17.99■□□□□ 0.47
RFTN1-204ENST00000441460 CD2APQ9Y5K6 639 aa17.99■□□□□ 0.47
RFTN1-204ENST00000441460 SOS1Q07889 1333 aaPredicted RBP17.98■□□□□ 0.47
RFTN1-204ENST00000441460 ZBTB1Q9Y2K1 713 aa17.98■□□□□ 0.47
RFTN1-204ENST00000441460 HEG1Q9ULI3 1381 aa17.98■□□□□ 0.47
RFTN1-204ENST00000441460 MYBBP1AQ9BQG0 1328 aaKnown RBP17.98■□□□□ 0.47
RFTN1-204ENST00000441460 USP42Q9H9J4 1324 aaKnown RBP17.98■□□□□ 0.47
RFTN1-204ENST00000441460 YY1P25490 414 aa17.97■□□□□ 0.47
RFTN1-204ENST00000441460 NLGN1Q8N2Q7 840 aa17.97■□□□□ 0.47
RFTN1-204ENST00000441460 BTBD11A6QL63 1104 aa17.96■□□□□ 0.47
RFTN1-204ENST00000441460 YBX3P16989 372 aaKnown RBP eCLIP17.96■□□□□ 0.47
RFTN1-204ENST00000441460 GPR162Q16538 588 aa17.96■□□□□ 0.47
RFTN1-204ENST00000441460 RTF1Q92541 710 aaKnown RBP17.96■□□□□ 0.47
RFTN1-204ENST00000441460 HTATSF1O43719 755 aaKnown RBP17.95■□□□□ 0.46
RFTN1-204ENST00000441460 ZEB1P37275 1124 aaPredicted RBP17.95■□□□□ 0.46
RFTN1-204ENST00000441460 FKBP8Q14318 412 aa17.95■□□□□ 0.46
RFTN1-204ENST00000441460 PELP1Q8IZL8 1130 aaKnown RBP17.95■□□□□ 0.46
RFTN1-204ENST00000441460 COL15A1P39059 1388 aa17.93■□□□□ 0.46
RFTN1-204ENST00000441460 NFE2L2Q16236 605 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms