RNA–Protein interactions for RNA: ENST00000440812.7

SMG7-205, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG7, Length 1,190 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-205ENST00000440812 FLAD1Q8NFF5 587 aa28.67■■■□□ 2.18
SMG7-205ENST00000440812 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.66■■■□□ 2.18
SMG7-205ENST00000440812 KDM6AO15550 1401 aaPredicted RBP28.66■■■□□ 2.18
SMG7-205ENST00000440812 N4BP2Q86UW6 1770 aaPredicted RBP28.65■■■□□ 2.18
SMG7-205ENST00000440812 ATP6V1AP38606 617 aa28.65■■■□□ 2.18
SMG7-205ENST00000440812 KIF13BQ9NQT8 1826 aa28.64■■■□□ 2.18
SMG7-205ENST00000440812 KDRP35968 1356 aa28.62■■■□□ 2.17
SMG7-205ENST00000440812 TJP1Q07157 1748 aa28.62■■■□□ 2.17
SMG7-205ENST00000440812 KIAA1551Q9HCM1 1747 aa28.62■■■□□ 2.17
SMG7-205ENST00000440812 GNPATO15228 680 aa28.61■■■□□ 2.17
SMG7-205ENST00000440812 ZNF530Q6P9A1 599 aaPredicted RBP28.61■■■□□ 2.17
SMG7-205ENST00000440812 SLC4A9Q96Q91 983 aa28.61■■■□□ 2.17
SMG7-205ENST00000440812 PLEKHG2Q9H7P9 1386 aa28.61■■■□□ 2.17
SMG7-205ENST00000440812 PLEKHO1Q53GL0 409 aaPredicted RBP28.6■■■□□ 2.17
SMG7-205ENST00000440812 KNSTRNQ9Y448 316 aa28.6■■■□□ 2.17
SMG7-205ENST00000440812 KIF7Q2M1P5 1343 aa28.6■■■□□ 2.17
SMG7-205ENST00000440812 SSFA2P28290 1259 aa28.59■■■□□ 2.17
SMG7-205ENST00000440812 HMGB2P26583 209 aaKnown RBP28.58■■■□□ 2.17
SMG7-205ENST00000440812 WWC3Q9ULE0 1092 aa28.58■■■□□ 2.17
SMG7-205ENST00000440812 AMER1Q5JTC6 1135 aaPredicted RBP28.57■■■□□ 2.16
SMG7-205ENST00000440812 SULT6B1Q6IMI4 303 aa28.57■■■□□ 2.16
SMG7-205ENST00000440812 DCAF5Q96JK2 942 aa28.57■■■□□ 2.16
SMG7-205ENST00000440812 RBM42Q9BTD8 480 aaKnown RBP28.57■■■□□ 2.16
SMG7-205ENST00000440812 CD2APQ9Y5K6 639 aa28.57■■■□□ 2.16
SMG7-205ENST00000440812 ERVV-2B6SEH9 535 aa28.56■■■□□ 2.16
SMG7-205ENST00000440812 BRCA1P38398 1863 aaKnown RBP28.55■■■□□ 2.16
SMG7-205ENST00000440812 IL13P35225 146 aa28.55■■■□□ 2.16
SMG7-205ENST00000440812 HSP90AB1P08238 724 aaKnown RBP28.53■■■□□ 2.16
SMG7-205ENST00000440812 AMOTQ4VCS5 1084 aa28.53■■■□□ 2.16
SMG7-205ENST00000440812 CICQ96RK0 1608 aaPredicted RBP28.53■■■□□ 2.16
SMG7-205ENST00000440812 CABP4P57796 275 aa28.52■■■□□ 2.16
SMG7-205ENST00000440812 GRIN3BO60391 1043 aa28.51■■■□□ 2.15
SMG7-205ENST00000440812 MTHFSP49914 203 aa28.51■■■□□ 2.15
SMG7-205ENST00000440812 C1orf141Q5JVX7 400 aa28.5■■■□□ 2.15
SMG7-205ENST00000440812 ADAMTS7Q9UKP4 1686 aa28.48■■■□□ 2.15
SMG7-205ENST00000440812 NFATC2IPQ8NCF5 419 aa28.48■■■□□ 2.15
SMG7-205ENST00000440812 PTCD1O75127 700 aaKnown RBP28.47■■■□□ 2.15
SMG7-205ENST00000440812 MMP10P09238 476 aa28.47■■■□□ 2.15
SMG7-205ENST00000440812 RTCBQ9Y3I0 505 aaKnown RBP28.47■■■□□ 2.15
SMG7-205ENST00000440812 HMOX1P09601 288 aa28.46■■■□□ 2.15
SMG7-205ENST00000440812 CC2D1BQ5T0F9 858 aaKnown RBP28.46■■■□□ 2.15
SMG7-205ENST00000440812 PER1O15534 1290 aaPredicted RBP28.45■■■□□ 2.14
SMG7-205ENST00000440812 C1QTNF8P60827 252 aa28.45■■■□□ 2.14
SMG7-205ENST00000440812 TRAPPC3LQ5T215 181 aa28.45■■■□□ 2.14
SMG7-205ENST00000440812 ARHGEF1Q92888 912 aaKnown RBP28.45■■■□□ 2.14
SMG7-205ENST00000440812 CNTNAP4Q9C0A0 1308 aa28.44■■■□□ 2.14
SMG7-205ENST00000440812 CNGB1Q14028 1251 aaPredicted RBP28.44■■■□□ 2.14
SMG7-205ENST00000440812 UBR2Q8IWV8 1755 aa28.44■■■□□ 2.14
SMG7-205ENST00000440812 AFDNP55196 1824 aaKnown RBP28.43■■■□□ 2.14
SMG7-205ENST00000440812 RC3H1Q5TC82 1133 aaKnown RBP28.42■■■□□ 2.14
SMG7-205ENST00000440812 LGR6Q9HBX8 967 aa28.42■■■□□ 2.14
SMG7-205ENST00000440812 ATP10DQ9P241 1426 aa28.42■■■□□ 2.14
SMG7-205ENST00000440812 ARFGEF1Q9Y6D6 1849 aa28.41■■■□□ 2.14
SMG7-205ENST00000440812 PXDNLA1KZ92 1463 aa28.41■■■□□ 2.14
SMG7-205ENST00000440812 SIPA1L3O60292 1781 aaPredicted RBP28.41■■■□□ 2.14
SMG7-205ENST00000440812 MRC1P22897 1456 aa28.4■■■□□ 2.14
SMG7-205ENST00000440812 GIGYF1O75420 1035 aaPredicted RBP28.4■■■□□ 2.14
SMG7-205ENST00000440812 RPS6KA4O75676 772 aa28.4■■■□□ 2.14
SMG7-205ENST00000440812 GYS1P13807 737 aa28.39■■■□□ 2.14
SMG7-205ENST00000440812 COL3A1P02461 1466 aaPredicted RBP28.39■■■□□ 2.13
SMG7-205ENST00000440812 SENP3-EIF4A1A0A087X0R7 540 aa28.38■■■□□ 2.13
SMG7-205ENST00000440812 CRKLP46109 303 aaKnown RBP28.38■■■□□ 2.13
SMG7-205ENST00000440812 AKAP4Q5JQC9 854 aa28.38■■■□□ 2.13
SMG7-205ENST00000440812 C10orf71Q711Q0 1435 aa28.37■■■□□ 2.13
SMG7-205ENST00000440812 RFC4P35249 363 aa28.37■■■□□ 2.13
SMG7-205ENST00000440812 KCPQ6ZWJ8 1503 aa28.37■■■□□ 2.13
SMG7-205ENST00000440812 ADRA2BP18089 450 aa28.36■■■□□ 2.13
SMG7-205ENST00000440812 SRP68Q9UHB9 627 aaKnown RBP28.36■■■□□ 2.13
SMG7-205ENST00000440812 ADCY9O60503 1353 aa28.36■■■□□ 2.13
SMG7-205ENST00000440812 SLC39A6Q13433 755 aa28.35■■■□□ 2.13
SMG7-205ENST00000440812 NLGN1Q8N2Q7 840 aa28.35■■■□□ 2.13
SMG7-205ENST00000440812 SLC52A2Q9HAB3 445 aa28.35■■■□□ 2.13
SMG7-205ENST00000440812 RNMTO43148 476 aaKnown RBP28.34■■■□□ 2.13
SMG7-205ENST00000440812 DIAPH1O60610 1272 aaKnown RBP28.34■■■□□ 2.13
SMG7-205ENST00000440812 MTHFSDQ2M296 383 aaKnown RBP28.34■■■□□ 2.13
SMG7-205ENST00000440812 A0A0G2JLW4 131 aa28.33■■■□□ 2.13
SMG7-205ENST00000440812 ZNF526Q8TF50 670 aaPredicted RBP28.33■■■□□ 2.13
SMG7-205ENST00000440812 SBF1O95248 1867 aa28.32■■■□□ 2.12
SMG7-205ENST00000440812 DNAJC10Q8IXB1 793 aa28.32■■■□□ 2.12
SMG7-205ENST00000440812 CEP350Q5VT06 3117 aa28.32■■■□□ 2.12
SMG7-205ENST00000440812 INTS5Q6P9B9 1019 aaKnown RBP28.31■■■□□ 2.12
SMG7-205ENST00000440812 CCDC88AQ3V6T2 1871 aa28.3■■■□□ 2.12
SMG7-205ENST00000440812 USP42Q9H9J4 1324 aaKnown RBP28.29■■■□□ 2.12
SMG7-205ENST00000440812 FKBP8Q14318 412 aa28.29■■■□□ 2.12
SMG7-205ENST00000440812 PARP3Q9Y6F1 533 aa28.29■■■□□ 2.12
SMG7-205ENST00000440812 DPEP1P16444 411 aa28.28■■■□□ 2.12
SMG7-205ENST00000440812 DDR1Q08345 913 aa28.27■■■□□ 2.12
SMG7-205ENST00000440812 CCDC87Q9NVE4 849 aa28.27■■■□□ 2.12
SMG7-205ENST00000440812 BCS1LQ9Y276 419 aa28.27■■■□□ 2.12
SMG7-205ENST00000440812 TGFB2P61812 414 aa28.26■■■□□ 2.11
SMG7-205ENST00000440812 DLEC1Q9Y238 1755 aa28.26■■■□□ 2.11
SMG7-205ENST00000440812 NRXN2Q9P2S2 1712 aa28.26■■■□□ 2.11
SMG7-205ENST00000440812 NPC1L1Q9UHC9 1359 aa28.25■■■□□ 2.11
SMG7-205ENST00000440812 U2SURPO15042 1029 aaKnown RBP28.25■■■□□ 2.11
SMG7-205ENST00000440812 GPBP1L1Q9HC44 474 aaPredicted RBP28.25■■■□□ 2.11
SMG7-205ENST00000440812 CYP19A1P11511 503 aaPredicted RBP28.23■■■□□ 2.11
SMG7-205ENST00000440812 SOS1Q07889 1333 aaPredicted RBP28.22■■■□□ 2.11
SMG7-205ENST00000440812 KCNA3P22001 575 aa28.22■■■□□ 2.11
SMG7-205ENST00000440812 CACNA1SQ13698 1873 aa28.22■■■□□ 2.11
SMG7-205ENST00000440812 DLG5Q8TDM6 1919 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms