RNA–Protein interactions for RNA: ENST00000440404.5

LINC01142-201, Transcript of long intergenic non-protein coding RNA 1142, humanhuman

TSL 1 (best) BASIC

Gene LINC01142, Length 1,457 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01142-201ENST00000440404 FOXD4L1Q9NU39 408 aa10.68□□□□□ -0.7
LINC01142-201ENST00000440404 CD2APQ9Y5K6 639 aa10.68□□□□□ -0.7
LINC01142-201ENST00000440404 GIGYF1O75420 1035 aaPredicted RBP10.68□□□□□ -0.7
LINC01142-201ENST00000440404 HSP90AB1P08238 724 aaKnown RBP10.68□□□□□ -0.7
LINC01142-201ENST00000440404 SSFA2P28290 1259 aa10.68□□□□□ -0.7
LINC01142-201ENST00000440404 MSL1Q68DK7 614 aa10.68□□□□□ -0.7
LINC01142-201ENST00000440404 NLGN2Q8NFZ4 835 aa10.68□□□□□ -0.7
LINC01142-201ENST00000440404 LOC102724428A0A0B4J2F2 783 aa10.67□□□□□ -0.7
LINC01142-201ENST00000440404 SIK1P57059 783 aa10.67□□□□□ -0.7
LINC01142-201ENST00000440404 FKBP8Q14318 412 aa10.67□□□□□ -0.7
LINC01142-201ENST00000440404 PIGBQ92521 554 aa10.67□□□□□ -0.7
LINC01142-201ENST00000440404 EYA1Q99502 592 aa10.67□□□□□ -0.7
LINC01142-201ENST00000440404 POLKQ9UBT6 870 aa10.67□□□□□ -0.7
LINC01142-201ENST00000440404 PHKG2P15735 406 aa10.66□□□□□ -0.7
LINC01142-201ENST00000440404 C1QTNF8P60827 252 aa10.66□□□□□ -0.7
LINC01142-201ENST00000440404 COL5A3P25940 1745 aaPredicted RBP10.66□□□□□ -0.7
LINC01142-201ENST00000440404 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.65□□□□□ -0.7
LINC01142-201ENST00000440404 PHF14O94880 888 aa10.65□□□□□ -0.7
LINC01142-201ENST00000440404 ATP6V1AP38606 617 aa10.65□□□□□ -0.7
LINC01142-201ENST00000440404 TNNT2P45379 298 aaPredicted RBP10.65□□□□□ -0.7
LINC01142-201ENST00000440404 KIF13BQ9NQT8 1826 aa10.65□□□□□ -0.71
LINC01142-201ENST00000440404 SENP3-EIF4A1A0A087X0R7 540 aa10.64□□□□□ -0.71
LINC01142-201ENST00000440404 ERVV-2B6SEH9 535 aa10.64□□□□□ -0.71
LINC01142-201ENST00000440404 EIF4A2Q14240 407 aaKnown RBP10.64□□□□□ -0.71
LINC01142-201ENST00000440404 AMOTQ4VCS5 1084 aa10.64□□□□□ -0.71
LINC01142-201ENST00000440404 DCAF5Q96JK2 942 aa10.64□□□□□ -0.71
LINC01142-201ENST00000440404 VIRMAQ69YN4 1812 aaKnown RBP10.64□□□□□ -0.71
LINC01142-201ENST00000440404 IGSF1Q8N6C5 1336 aa10.64□□□□□ -0.71
LINC01142-201ENST00000440404 GNPATO15228 680 aa10.63□□□□□ -0.71
LINC01142-201ENST00000440404 YBX3P16989 372 aaKnown RBP eCLIP10.63□□□□□ -0.71
LINC01142-201ENST00000440404 PLEKHO1Q53GL0 409 aaPredicted RBP10.63□□□□□ -0.71
LINC01142-201ENST00000440404 SCN11AQ9UI33 1791 aa10.63□□□□□ -0.71
LINC01142-201ENST00000440404 NPC1L1Q9UHC9 1359 aa10.63□□□□□ -0.71
LINC01142-201ENST00000440404 C1orf141Q5JVX7 400 aa10.62□□□□□ -0.71
LINC01142-201ENST00000440404 LINC00116Q8NCU8 138 aa10.62□□□□□ -0.71
LINC01142-201ENST00000440404 PANK3Q9H999 370 aa10.62□□□□□ -0.71
LINC01142-201ENST00000440404 KNSTRNQ9Y448 316 aa10.62□□□□□ -0.71
LINC01142-201ENST00000440404 CICQ96RK0 1608 aaPredicted RBP10.62□□□□□ -0.71
LINC01142-201ENST00000440404 CEP350Q5VT06 3117 aa10.62□□□□□ -0.71
LINC01142-201ENST00000440404 C4AP0C0L4 1744 aa10.62□□□□□ -0.71
LINC01142-201ENST00000440404 ZNF530Q6P9A1 599 aaPredicted RBP10.61□□□□□ -0.71
LINC01142-201ENST00000440404 MORC1Q86VD1 984 aa10.61□□□□□ -0.71
LINC01142-201ENST00000440404 ASAP1Q9ULH1 1129 aa10.61□□□□□ -0.71
LINC01142-201ENST00000440404 RTCBQ9Y3I0 505 aaKnown RBP10.61□□□□□ -0.71
LINC01142-201ENST00000440404 KDRP35968 1356 aa10.61□□□□□ -0.71
LINC01142-201ENST00000440404 TRAPPC3LQ5T215 181 aa10.61□□□□□ -0.71
LINC01142-201ENST00000440404 ATP10DQ9P241 1426 aa10.6□□□□□ -0.71
LINC01142-201ENST00000440404 CABP4P57796 275 aa10.6□□□□□ -0.71
LINC01142-201ENST00000440404 ITPK1Q13572 414 aa10.6□□□□□ -0.71
LINC01142-201ENST00000440404 RALBP1Q15311 655 aa10.6□□□□□ -0.71
LINC01142-201ENST00000440404 CCDC184Q52MB2 194 aa10.6□□□□□ -0.71
LINC01142-201ENST00000440404 NLGN1Q8N2Q7 840 aa10.6□□□□□ -0.71
LINC01142-201ENST00000440404 RBM42Q9BTD8 480 aaKnown RBP10.6□□□□□ -0.71
LINC01142-201ENST00000440404 GPBP1L1Q9HC44 474 aaPredicted RBP10.6□□□□□ -0.71
LINC01142-201ENST00000440404 ATG3Q9NT62 314 aa10.6□□□□□ -0.71
LINC01142-201ENST00000440404 CNTNAP4Q9C0A0 1308 aa10.6□□□□□ -0.71
LINC01142-201ENST00000440404 N4BP2Q86UW6 1770 aaPredicted RBP10.59□□□□□ -0.71
LINC01142-201ENST00000440404 MYH14Q7Z406 1995 aaKnown RBP10.59□□□□□ -0.71
LINC01142-201ENST00000440404 MTHFSP49914 203 aa10.59□□□□□ -0.71
LINC01142-201ENST00000440404 RC3H1Q5TC82 1133 aaKnown RBP10.59□□□□□ -0.71
LINC01142-201ENST00000440404 KDM6AO15550 1401 aaPredicted RBP10.59□□□□□ -0.71
LINC01142-201ENST00000440404 BRCA1P38398 1863 aaKnown RBP10.59□□□□□ -0.71
LINC01142-201ENST00000440404 MMP10P09238 476 aa10.58□□□□□ -0.72
LINC01142-201ENST00000440404 RFC4P35249 363 aa10.58□□□□□ -0.72
LINC01142-201ENST00000440404 AMIGO3Q86WK7 504 aa10.58□□□□□ -0.72
LINC01142-201ENST00000440404 YTHDC1Q96MU7 727 aaKnown RBP10.58□□□□□ -0.72
LINC01142-201ENST00000440404 ARFGEF1Q9Y6D6 1849 aa10.58□□□□□ -0.72
LINC01142-201ENST00000440404 TJP1Q07157 1748 aa10.57□□□□□ -0.72
LINC01142-201ENST00000440404 ADCY9O60503 1353 aa10.57□□□□□ -0.72
LINC01142-201ENST00000440404 CCDC87Q9NVE4 849 aa10.57□□□□□ -0.72
LINC01142-201ENST00000440404 KIAA1551Q9HCM1 1747 aa10.57□□□□□ -0.72
LINC01142-201ENST00000440404 C10orf71Q711Q0 1435 aa10.56□□□□□ -0.72
LINC01142-201ENST00000440404 MYBBP1AQ9BQG0 1328 aaKnown RBP10.56□□□□□ -0.72
LINC01142-201ENST00000440404 TGFB2P61812 414 aa10.56□□□□□ -0.72
LINC01142-201ENST00000440404 SULT6B1Q6IMI4 303 aa10.56□□□□□ -0.72
LINC01142-201ENST00000440404 PXDNLA1KZ92 1463 aa10.56□□□□□ -0.72
LINC01142-201ENST00000440404 RPS6KA4O75676 772 aa10.55□□□□□ -0.72
LINC01142-201ENST00000440404 PARP3Q9Y6F1 533 aa10.55□□□□□ -0.72
LINC01142-201ENST00000440404 PLCB2Q00722 1185 aa10.55□□□□□ -0.72
LINC01142-201ENST00000440404 AEBP1Q8IUX7 1158 aa10.55□□□□□ -0.72
LINC01142-201ENST00000440404 CNKSR2Q8WXI2 1034 aa10.55□□□□□ -0.72
LINC01142-201ENST00000440404 PTCD1O75127 700 aaKnown RBP10.54□□□□□ -0.72
LINC01142-201ENST00000440404 AKAP4Q5JQC9 854 aa10.54□□□□□ -0.72
LINC01142-201ENST00000440404 NFATC2IPQ8NCF5 419 aa10.54□□□□□ -0.72
LINC01142-201ENST00000440404 PNISRQ8TF01 805 aaKnown RBP10.54□□□□□ -0.72
LINC01142-201ENST00000440404 ARHGEF1Q92888 912 aaKnown RBP10.54□□□□□ -0.72
LINC01142-201ENST00000440404 TAOK2Q9UL54 1235 aa10.54□□□□□ -0.72
LINC01142-201ENST00000440404 MRC1P22897 1456 aa10.54□□□□□ -0.72
LINC01142-201ENST00000440404 GYS1P13807 737 aa10.53□□□□□ -0.72
LINC01142-201ENST00000440404 IL13P35225 146 aa10.53□□□□□ -0.72
LINC01142-201ENST00000440404 CRKLP46109 303 aaKnown RBP10.53□□□□□ -0.72
LINC01142-201ENST00000440404 SMIM5Q71RC9 77 aa10.53□□□□□ -0.72
LINC01142-201ENST00000440404 SLC4A9Q96Q91 983 aa10.53□□□□□ -0.72
LINC01142-201ENST00000440404 MRS2Q9HD23 443 aa10.53□□□□□ -0.72
LINC01142-201ENST00000440404 WWC3Q9ULE0 1092 aa10.53□□□□□ -0.72
LINC01142-201ENST00000440404 UBR2Q8IWV8 1755 aa10.52□□□□□ -0.72
LINC01142-201ENST00000440404 ADAMTS7Q9UKP4 1686 aa10.52□□□□□ -0.73
LINC01142-201ENST00000440404 HOXD11P31277 338 aaPredicted RBP10.52□□□□□ -0.73
LINC01142-201ENST00000440404 ZNF526Q8TF50 670 aaPredicted RBP10.52□□□□□ -0.73
LINC01142-201ENST00000440404 BCS1LQ9Y276 419 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms