RNA–Protein interactions for RNA: ENST00000440313.2

LRTOMT-209, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 3 BASIC

Gene LRTOMT, Length 253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-209ENST00000440313 AKAP4Q5JQC9 854 aa9.16□□□□□ -0.94
LRTOMT-209ENST00000440313 RBM42Q9BTD8 480 aaKnown RBP9.16□□□□□ -0.94
LRTOMT-209ENST00000440313 MAP3K5Q99683 1374 aa9.15□□□□□ -0.94
LRTOMT-209ENST00000440313 QSER1Q2KHR3 1735 aa9.15□□□□□ -0.94
LRTOMT-209ENST00000440313 HMOX1P09601 288 aa9.15□□□□□ -0.94
LRTOMT-209ENST00000440313 SSFA2P28290 1259 aa9.15□□□□□ -0.94
LRTOMT-209ENST00000440313 KLHL34Q8N239 644 aa9.15□□□□□ -0.94
LRTOMT-209ENST00000440313 NFATC2IPQ8NCF5 419 aa9.15□□□□□ -0.94
LRTOMT-209ENST00000440313 CFAP53Q96M91 514 aa9.15□□□□□ -0.94
LRTOMT-209ENST00000440313 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.14□□□□□ -0.95
LRTOMT-209ENST00000440313 GNPATO15228 680 aa9.14□□□□□ -0.95
LRTOMT-209ENST00000440313 PHF14O94880 888 aa9.14□□□□□ -0.95
LRTOMT-209ENST00000440313 ITPK1Q13572 414 aa9.14□□□□□ -0.95
LRTOMT-209ENST00000440313 GPR162Q16538 588 aa9.14□□□□□ -0.95
LRTOMT-209ENST00000440313 MSL1Q68DK7 614 aa9.14□□□□□ -0.95
LRTOMT-209ENST00000440313 LINC00116Q8NCU8 138 aa9.14□□□□□ -0.95
LRTOMT-209ENST00000440313 TOGARAM1Q9Y4F4 1720 aa9.14□□□□□ -0.95
LRTOMT-209ENST00000440313 GOLGB1Q14789 3259 aaKnown RBP9.13□□□□□ -0.95
LRTOMT-209ENST00000440313 U2SURPO15042 1029 aaKnown RBP9.13□□□□□ -0.95
LRTOMT-209ENST00000440313 TRAPPC3LQ5T215 181 aa9.13□□□□□ -0.95
LRTOMT-209ENST00000440313 RC3H1Q5TC82 1133 aaKnown RBP9.13□□□□□ -0.95
LRTOMT-209ENST00000440313 NUDCQ9Y266 331 aa9.13□□□□□ -0.95
LRTOMT-209ENST00000440313 RTCBQ9Y3I0 505 aaKnown RBP9.13□□□□□ -0.95
LRTOMT-209ENST00000440313 C5P01031 1676 aa9.13□□□□□ -0.95
LRTOMT-209ENST00000440313 PTCD1O75127 700 aaKnown RBP9.12□□□□□ -0.95
LRTOMT-209ENST00000440313 ADRA2BP18089 450 aa9.12□□□□□ -0.95
LRTOMT-209ENST00000440313 MTHFSDQ2M296 383 aaKnown RBP9.12□□□□□ -0.95
LRTOMT-209ENST00000440313 SLC52A2Q9HAB3 445 aa9.12□□□□□ -0.95
LRTOMT-209ENST00000440313 LGR6Q9HBX8 967 aa9.12□□□□□ -0.95
LRTOMT-209ENST00000440313 CD2APQ9Y5K6 639 aa9.12□□□□□ -0.95
LRTOMT-209ENST00000440313 TAF1LQ8IZX4 1826 aa9.12□□□□□ -0.95
LRTOMT-209ENST00000440313 C4BP0C0L5 1744 aa9.11□□□□□ -0.95
LRTOMT-209ENST00000440313 TUBGCP6Q96RT7 1819 aa9.11□□□□□ -0.95
LRTOMT-209ENST00000440313 RNMTO43148 476 aaKnown RBP9.11□□□□□ -0.95
LRTOMT-209ENST00000440313 NLGN1Q8N2Q7 840 aa9.11□□□□□ -0.95
LRTOMT-209ENST00000440313 SLC4A9Q96Q91 983 aa9.11□□□□□ -0.95
LRTOMT-209ENST00000440313 KDM6AO15550 1401 aaPredicted RBP9.11□□□□□ -0.95
LRTOMT-209ENST00000440313 CNTNAP4Q9C0A0 1308 aa9.1□□□□□ -0.95
LRTOMT-209ENST00000440313 GRIN3BO60391 1043 aa9.1□□□□□ -0.95
LRTOMT-209ENST00000440313 RPS6KA4O75676 772 aa9.1□□□□□ -0.95
LRTOMT-209ENST00000440313 RFC4P35249 363 aa9.1□□□□□ -0.95
LRTOMT-209ENST00000440313 SMIM5Q71RC9 77 aa9.1□□□□□ -0.95
LRTOMT-209ENST00000440313 AMIGO3Q86WK7 504 aa9.1□□□□□ -0.95
LRTOMT-209ENST00000440313 PELP1Q8IZL8 1130 aaKnown RBP9.1□□□□□ -0.95
LRTOMT-209ENST00000440313 GAS2L2Q8NHY3 880 aa9.1□□□□□ -0.95
LRTOMT-209ENST00000440313 ARHGEF1Q92888 912 aaKnown RBP9.1□□□□□ -0.95
LRTOMT-209ENST00000440313 COL24A1Q17RW2 1714 aa9.09□□□□□ -0.95
LRTOMT-209ENST00000440313 GNAT3A8MTJ3 354 aa9.09□□□□□ -0.95
LRTOMT-209ENST00000440313 U2AF1L5P0DN76 240 aaPredicted RBP9.09□□□□□ -0.95
LRTOMT-209ENST00000440313 PPP2R1AP30153 589 aa9.09□□□□□ -0.95
LRTOMT-209ENST00000440313 U2AF1Q01081 240 aaKnown RBP eCLIP9.09□□□□□ -0.95
LRTOMT-209ENST00000440313 NLGN2Q8NFZ4 835 aa9.09□□□□□ -0.95
LRTOMT-209ENST00000440313 FCHSD2O94868 740 aa9.08□□□□□ -0.96
LRTOMT-209ENST00000440313 MMP10P09238 476 aa9.08□□□□□ -0.96
LRTOMT-209ENST00000440313 CRKLP46109 303 aaKnown RBP9.08□□□□□ -0.96
LRTOMT-209ENST00000440313 TEFQ10587 303 aa9.08□□□□□ -0.96
LRTOMT-209ENST00000440313 TTC5Q8N0Z6 440 aa9.08□□□□□ -0.96
LRTOMT-209ENST00000440313 UBR3Q6ZT12 1888 aa9.08□□□□□ -0.96
LRTOMT-209ENST00000440313 PRKAR2BP31323 418 aa9.07□□□□□ -0.96
LRTOMT-209ENST00000440313 SLC39A6Q13433 755 aa9.07□□□□□ -0.96
LRTOMT-209ENST00000440313 VSIG10Q8N0Z9 540 aa9.07□□□□□ -0.96
LRTOMT-209ENST00000440313 ZNF831Q5JPB2 1677 aa9.07□□□□□ -0.96
LRTOMT-209ENST00000440313 SCN11AQ9UI33 1791 aa9.07□□□□□ -0.96
LRTOMT-209ENST00000440313 ZPR1O75312 459 aa9.06□□□□□ -0.96
LRTOMT-209ENST00000440313 GIGYF1O75420 1035 aaPredicted RBP9.06□□□□□ -0.96
LRTOMT-209ENST00000440313 STARD3NLO95772 234 aa9.06□□□□□ -0.96
LRTOMT-209ENST00000440313 NEFMP07197 916 aa9.06□□□□□ -0.96
LRTOMT-209ENST00000440313 GYS1P13807 737 aa9.06□□□□□ -0.96
LRTOMT-209ENST00000440313 INTS5Q6P9B9 1019 aaKnown RBP9.06□□□□□ -0.96
LRTOMT-209ENST00000440313 DNAJC10Q8IXB1 793 aa9.06□□□□□ -0.96
LRTOMT-209ENST00000440313 IL17REQ8NFR9 667 aa9.06□□□□□ -0.96
LRTOMT-209ENST00000440313 RTF1Q92541 710 aaKnown RBP9.06□□□□□ -0.96
LRTOMT-209ENST00000440313 PHACTR3Q96KR7 559 aa9.06□□□□□ -0.96
LRTOMT-209ENST00000440313 TEX13AQ9BXU3 409 aaPredicted RBP9.06□□□□□ -0.96
LRTOMT-209ENST00000440313 RSPH6AQ9H0K4 717 aa9.06□□□□□ -0.96
LRTOMT-209ENST00000440313 CCDC87Q9NVE4 849 aa9.06□□□□□ -0.96
LRTOMT-209ENST00000440313 PARP3Q9Y6F1 533 aa9.06□□□□□ -0.96
LRTOMT-209ENST00000440313 COL3A1P02461 1466 aaPredicted RBP9.06□□□□□ -0.96
LRTOMT-209ENST00000440313 CYP19A1P11511 503 aaPredicted RBP9.05□□□□□ -0.96
LRTOMT-209ENST00000440313 TGFB2P61812 414 aa9.05□□□□□ -0.96
LRTOMT-209ENST00000440313 PNNQ9H307 717 aaKnown RBP9.05□□□□□ -0.96
LRTOMT-209ENST00000440313 CHD4Q14839 1912 aa9.05□□□□□ -0.96
LRTOMT-209ENST00000440313 BTBD11A6QL63 1104 aa9.04□□□□□ -0.96
LRTOMT-209ENST00000440313 HTATSF1O43719 755 aaKnown RBP9.04□□□□□ -0.96
LRTOMT-209ENST00000440313 YBX3P16989 372 aaKnown RBP eCLIP9.04□□□□□ -0.96
LRTOMT-209ENST00000440313 ZNF790Q6PG37 636 aa9.04□□□□□ -0.96
LRTOMT-209ENST00000440313 MYH14Q7Z406 1995 aaKnown RBP9.04□□□□□ -0.96
LRTOMT-209ENST00000440313 MRC1P22897 1456 aa9.03□□□□□ -0.96
LRTOMT-209ENST00000440313 A0A087WZG4 1122 aa9.03□□□□□ -0.96
LRTOMT-209ENST00000440313 RALBP1Q15311 655 aa9.03□□□□□ -0.96
LRTOMT-209ENST00000440313 NPM2Q86SE8 214 aaKnown RBP9.03□□□□□ -0.96
LRTOMT-209ENST00000440313 ZNF496Q96IT1 587 aaPredicted RBP9.03□□□□□ -0.96
LRTOMT-209ENST00000440313 FMNL2Q96PY5 1086 aa9.03□□□□□ -0.96
LRTOMT-209ENST00000440313 USP42Q9H9J4 1324 aaKnown RBP9.03□□□□□ -0.96
LRTOMT-209ENST00000440313 CANXP27824 592 aaKnown RBP9.02□□□□□ -0.97
LRTOMT-209ENST00000440313 FKBP8Q14318 412 aa9.02□□□□□ -0.97
LRTOMT-209ENST00000440313 USPL1Q5W0Q7 1092 aa9.02□□□□□ -0.97
LRTOMT-209ENST00000440313 SRP68Q9UHB9 627 aaKnown RBP9.02□□□□□ -0.97
LRTOMT-209ENST00000440313 NARFQ9UHQ1 456 aa9.02□□□□□ -0.97
LRTOMT-209ENST00000440313 COL5A3P25940 1745 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms