RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 DCAF5Q96JK2 942 aa28.36■■■□□ 2.13
CPNE1-219ENST00000440240 ATG3Q9NT62 314 aa28.36■■■□□ 2.13
CPNE1-219ENST00000440240 AMIGO3Q86WK7 504 aa28.34■■■□□ 2.13
CPNE1-219ENST00000440240 ITPK1Q13572 414 aa28.32■■■□□ 2.12
CPNE1-219ENST00000440240 GNPATO15228 680 aa28.31■■■□□ 2.12
CPNE1-219ENST00000440240 YBX3P16989 372 aaKnown RBP eCLIP28.3■■■□□ 2.122e-6■■■■□ 21.8
CPNE1-219ENST00000440240 ZNF530Q6P9A1 599 aaPredicted RBP28.3■■■□□ 2.12
CPNE1-219ENST00000440240 SMIM5Q71RC9 77 aa28.3■■■□□ 2.12
CPNE1-219ENST00000440240 MTHFSP49914 203 aa28.28■■■□□ 2.12
CPNE1-219ENST00000440240 CABP4P57796 275 aa28.28■■■□□ 2.12
CPNE1-219ENST00000440240 C1orf141Q5JVX7 400 aa28.28■■■□□ 2.12
CPNE1-219ENST00000440240 RBM42Q9BTD8 480 aaKnown RBP28.27■■■□□ 2.12
CPNE1-219ENST00000440240 UBR3Q6ZT12 1888 aa28.27■■■□□ 2.12
CPNE1-219ENST00000440240 SULT6B1Q6IMI4 303 aa28.26■■■□□ 2.11
CPNE1-219ENST00000440240 AEBP1Q8IUX7 1158 aa28.26■■■□□ 2.11
CPNE1-219ENST00000440240 AMER1Q5JTC6 1135 aaPredicted RBP28.25■■■□□ 2.11
CPNE1-219ENST00000440240 RTCBQ9Y3I0 505 aaKnown RBP28.25■■■□□ 2.11
CPNE1-219ENST00000440240 IL13P35225 146 aa28.24■■■□□ 2.11
CPNE1-219ENST00000440240 TRAPPC3LQ5T215 181 aa28.24■■■□□ 2.11
CPNE1-219ENST00000440240 RC3H1Q5TC82 1133 aaKnown RBP28.24■■■□□ 2.11
CPNE1-219ENST00000440240 KDRP35968 1356 aa28.23■■■□□ 2.11
CPNE1-219ENST00000440240 KIF7Q2M1P5 1343 aa28.22■■■□□ 2.11
CPNE1-219ENST00000440240 SLC4A9Q96Q91 983 aa28.22■■■□□ 2.11
CPNE1-219ENST00000440240 KDM6AO15550 1401 aaPredicted RBP28.2■■■□□ 2.11
CPNE1-219ENST00000440240 ADRA2BP18089 450 aa28.2■■■□□ 2.1
CPNE1-219ENST00000440240 C1QTNF8P60827 252 aa28.2■■■□□ 2.1
CPNE1-219ENST00000440240 NLGN1Q8N2Q7 840 aa28.2■■■□□ 2.1
CPNE1-219ENST00000440240 NFATC2IPQ8NCF5 419 aa28.19■■■□□ 2.1
CPNE1-219ENST00000440240 RPS6KA4O75676 772 aa28.18■■■□□ 2.1
CPNE1-219ENST00000440240 CNTNAP4Q9C0A0 1308 aa28.18■■■□□ 2.1
CPNE1-219ENST00000440240 MMP10P09238 476 aa28.17■■■□□ 2.1
CPNE1-219ENST00000440240 ARHGEF1Q92888 912 aaKnown RBP28.17■■■□□ 2.1
CPNE1-219ENST00000440240 PER1O15534 1290 aaPredicted RBP28.16■■■□□ 2.1
CPNE1-219ENST00000440240 PTCD1O75127 700 aaKnown RBP28.16■■■□□ 2.1
CPNE1-219ENST00000440240 ZNF831Q5JPB2 1677 aa28.16■■■□□ 2.1
CPNE1-219ENST00000440240 GIGYF1O75420 1035 aaPredicted RBP28.15■■■□□ 2.1
CPNE1-219ENST00000440240 RFC4P35249 363 aa28.15■■■□□ 2.1
CPNE1-219ENST00000440240 AKAP4Q5JQC9 854 aa28.15■■■□□ 2.1
CPNE1-219ENST00000440240 CC2D1BQ5T0F9 858 aaKnown RBP28.1■■■□□ 2.09
CPNE1-219ENST00000440240 DIAPH1O60610 1272 aaKnown RBP28.09■■■□□ 2.09
CPNE1-219ENST00000440240 GYS1P13807 737 aa28.09■■■□□ 2.09
CPNE1-219ENST00000440240 TGFB2P61812 414 aa28.09■■■□□ 2.09
CPNE1-219ENST00000440240 HMOX1P09601 288 aa28.08■■■□□ 2.09
CPNE1-219ENST00000440240 CRKLP46109 303 aaKnown RBP28.08■■■□□ 2.09
CPNE1-219ENST00000440240 SLC52A2Q9HAB3 445 aa28.08■■■□□ 2.09
CPNE1-219ENST00000440240 SENP3-EIF4A1A0A087X0R7 540 aa28.07■■■□□ 2.08
CPNE1-219ENST00000440240 WWC3Q9ULE0 1092 aa28.07■■■□□ 2.08
CPNE1-219ENST00000440240 PARP3Q9Y6F1 533 aa28.07■■■□□ 2.08
CPNE1-219ENST00000440240 LGR6Q9HBX8 967 aa28.06■■■□□ 2.08
CPNE1-219ENST00000440240 CCDC87Q9NVE4 849 aa28.06■■■□□ 2.08
CPNE1-219ENST00000440240 COL5A3P25940 1745 aaPredicted RBP28.04■■■□□ 2.08
CPNE1-219ENST00000440240 ATP10DQ9P241 1426 aa28.04■■■□□ 2.08
CPNE1-219ENST00000440240 RNMTO43148 476 aaKnown RBP28.03■■■□□ 2.08
CPNE1-219ENST00000440240 GPBP1L1Q9HC44 474 aaPredicted RBP28.03■■■□□ 2.08
CPNE1-219ENST00000440240 NPC1L1Q9UHC9 1359 aa28.02■■■□□ 2.08
CPNE1-219ENST00000440240 MTHFSDQ2M296 383 aaKnown RBP28.02■■■□□ 2.08
CPNE1-219ENST00000440240 MYH14Q7Z406 1995 aaKnown RBP28.01■■■□□ 2.07
CPNE1-219ENST00000440240 A0A0G2JLW4 131 aa28.01■■■□□ 2.07
CPNE1-219ENST00000440240 INTS5Q6P9B9 1019 aaKnown RBP28.01■■■□□ 2.07
CPNE1-219ENST00000440240 SCN11AQ9UI33 1791 aa28■■■□□ 2.07
CPNE1-219ENST00000440240 CICQ96RK0 1608 aaPredicted RBP28■■■□□ 2.07
CPNE1-219ENST00000440240 PXDNLA1KZ92 1463 aa27.99■■■□□ 2.07
CPNE1-219ENST00000440240 C10orf71Q711Q0 1435 aa27.99■■■□□ 2.07
CPNE1-219ENST00000440240 ADCY9O60503 1353 aa27.99■■■□□ 2.07
CPNE1-219ENST00000440240 USP42Q9H9J4 1324 aaKnown RBP27.98■■■□□ 2.07
CPNE1-219ENST00000440240 DNAJC10Q8IXB1 793 aa27.98■■■□□ 2.07
CPNE1-219ENST00000440240 SRP68Q9UHB9 627 aaKnown RBP27.98■■■□□ 2.07
CPNE1-219ENST00000440240 BCS1LQ9Y276 419 aa27.98■■■□□ 2.07
CPNE1-219ENST00000440240 DPEP1P16444 411 aa27.96■■■□□ 2.07
CPNE1-219ENST00000440240 SLC39A6Q13433 755 aa27.96■■■□□ 2.07
CPNE1-219ENST00000440240 CNGB1Q14028 1251 aaPredicted RBP27.96■■■□□ 2.07
CPNE1-219ENST00000440240 FKBP8Q14318 412 aa27.96■■■□□ 2.07
CPNE1-219ENST00000440240 KIF13BQ9NQT8 1826 aa27.95■■■□□ 2.07
CPNE1-219ENST00000440240 U2SURPO15042 1029 aaKnown RBP27.95■■■□□ 2.06
CPNE1-219ENST00000440240 ZPR1O75312 459 aa27.95■■■□□ 2.06
CPNE1-219ENST00000440240 CYP19A1P11511 503 aaPredicted RBP27.95■■■□□ 2.06
CPNE1-219ENST00000440240 VSIG10Q8N0Z9 540 aa27.95■■■□□ 2.06
CPNE1-219ENST00000440240 ZNF526Q8TF50 670 aaPredicted RBP27.94■■■□□ 2.06
CPNE1-219ENST00000440240 C4AP0C0L4 1744 aa27.94■■■□□ 2.06
CPNE1-219ENST00000440240 MRC1P22897 1456 aa27.93■■■□□ 2.06
CPNE1-219ENST00000440240 FCHSD2O94868 740 aa27.92■■■□□ 2.06
CPNE1-219ENST00000440240 TJP1Q07157 1748 aa27.92■■■□□ 2.06
CPNE1-219ENST00000440240 TM4SF1P30408 202 aa27.91■■■□□ 2.06
CPNE1-219ENST00000440240 ARHGAP27Q6ZUM4 889 aa27.91■■■□□ 2.06
CPNE1-219ENST00000440240 GAS2L2Q8NHY3 880 aa27.91■■■□□ 2.06
CPNE1-219ENST00000440240 PIM2Q9P1W9 311 aa27.91■■■□□ 2.06
CPNE1-219ENST00000440240 SOS1Q07889 1333 aaPredicted RBP27.91■■■□□ 2.06
CPNE1-219ENST00000440240 DDR1Q08345 913 aa27.9■■■□□ 2.06
CPNE1-219ENST00000440240 TTC5Q8N0Z6 440 aa27.9■■■□□ 2.06
CPNE1-219ENST00000440240 GNAT3A8MTJ3 354 aa27.89■■■□□ 2.06
CPNE1-219ENST00000440240 KCNA3P22001 575 aa27.89■■■□□ 2.06
CPNE1-219ENST00000440240 USPL1Q5W0Q7 1092 aa27.89■■■□□ 2.06
CPNE1-219ENST00000440240 TEFQ10587 303 aa27.88■■■□□ 2.05
CPNE1-219ENST00000440240 CFAP53Q96M91 514 aa27.88■■■□□ 2.05
CPNE1-219ENST00000440240 NARFQ9UHQ1 456 aa27.88■■■□□ 2.05
CPNE1-219ENST00000440240 N4BP2Q86UW6 1770 aaPredicted RBP27.88■■■□□ 2.05
CPNE1-219ENST00000440240 KIAA1551Q9HCM1 1747 aa27.87■■■□□ 2.05
CPNE1-219ENST00000440240 POLRMTO00411 1230 aaKnown RBP27.87■■■□□ 2.05
CPNE1-219ENST00000440240 STARD3NLO95772 234 aa27.87■■■□□ 2.05
CPNE1-219ENST00000440240 COL3A1P02461 1466 aaPredicted RBP27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms