RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 BTBD11A6QL63 1104 aa18.88■□□□□ 0.61
IFT140-204ENST00000439987 HDAC1Q13547 482 aaPredicted RBP18.88■□□□□ 0.61
IFT140-204ENST00000439987 EIF4A1P60842 406 aaKnown RBP18.88■□□□□ 0.61
IFT140-204ENST00000439987 COL5A2P05997 1499 aaPredicted RBP18.88■□□□□ 0.61
IFT140-204ENST00000439987 INTS3Q68E01 1043 aaKnown RBP18.88■□□□□ 0.61
IFT140-204ENST00000439987 PHKG2P15735 406 aa18.86■□□□□ 0.61
IFT140-204ENST00000439987 RGS3P49796 1198 aa18.86■□□□□ 0.61
IFT140-204ENST00000439987 G2E3Q7L622 706 aa18.86■□□□□ 0.61
IFT140-204ENST00000439987 CACNA1FO60840 1977 aa18.86■□□□□ 0.61
IFT140-204ENST00000439987 HOXB7P09629 217 aa18.86■□□□□ 0.61
IFT140-204ENST00000439987 NOP58Q9Y2X3 529 aaKnown RBP18.86■□□□□ 0.61
IFT140-204ENST00000439987 PKD1L3Q7Z443 1732 aa18.85■□□□□ 0.61
IFT140-204ENST00000439987 SIPA1L3O60292 1781 aaPredicted RBP18.85■□□□□ 0.61
IFT140-204ENST00000439987 KCNQ3O43525 872 aa18.85■□□□□ 0.61
IFT140-204ENST00000439987 TOM1L2Q6ZVM7 507 aa18.85■□□□□ 0.61
IFT140-204ENST00000439987 AHDC1Q5TGY3 1603 aaPredicted RBP18.85■□□□□ 0.61
IFT140-204ENST00000439987 PDE4AP27815 886 aa18.85■□□□□ 0.61
IFT140-204ENST00000439987 IFNL2Q8IZJ0 200 aa18.85■□□□□ 0.61
IFT140-204ENST00000439987 HDGFL1Q5TGJ6 251 aa18.84■□□□□ 0.61
IFT140-204ENST00000439987 NECTIN2Q92692 538 aa18.84■□□□□ 0.61
IFT140-204ENST00000439987 KDM6AO15550 1401 aaPredicted RBP18.84■□□□□ 0.61
IFT140-204ENST00000439987 SCN11AQ9UI33 1791 aa18.84■□□□□ 0.61
IFT140-204ENST00000439987 FLIIQ13045 1269 aa18.83■□□□□ 0.6
IFT140-204ENST00000439987 CHMP4AQ9BY43 222 aa18.83■□□□□ 0.6
IFT140-204ENST00000439987 BACH2Q9BYV9 841 aa18.83■□□□□ 0.6
IFT140-204ENST00000439987 PDZRN3Q9UPQ7 1066 aa18.82■□□□□ 0.6
IFT140-204ENST00000439987 CYP27B1O15528 508 aa18.82■□□□□ 0.6
IFT140-204ENST00000439987 PARP4Q9UKK3 1724 aaKnown RBP18.81■□□□□ 0.6
IFT140-204ENST00000439987 CARD10Q9BWT7 1032 aa18.81■□□□□ 0.6
IFT140-204ENST00000439987 C1orf115Q9H7X2 142 aa18.81■□□□□ 0.6
IFT140-204ENST00000439987 SMC5Q8IY18 1101 aa18.81■□□□□ 0.6
IFT140-204ENST00000439987 SLC52A2Q9HAB3 445 aa18.81■□□□□ 0.6
IFT140-204ENST00000439987 DCAF5Q96JK2 942 aa18.8■□□□□ 0.6
IFT140-204ENST00000439987 HEG1Q9ULI3 1381 aa18.8■□□□□ 0.6
IFT140-204ENST00000439987 EVA1CP58658 441 aa18.8■□□□□ 0.6
IFT140-204ENST00000439987 FKBP5Q13451 457 aaPredicted RBP18.8■□□□□ 0.6
IFT140-204ENST00000439987 STRN4Q9NRL3 753 aa18.8■□□□□ 0.6
IFT140-204ENST00000439987 F6X3S4 739 aa18.79■□□□□ 0.6
IFT140-204ENST00000439987 HSP90AB1P08238 724 aaKnown RBP18.79■□□□□ 0.6
IFT140-204ENST00000439987 EIF2S2P20042 333 aaKnown RBP18.79■□□□□ 0.6
IFT140-204ENST00000439987 CCT4P50991 539 aaKnown RBP18.79■□□□□ 0.6
IFT140-204ENST00000439987 LARP1Q6PKG0 1096 aaKnown RBP18.79■□□□□ 0.6
IFT140-204ENST00000439987 COL22A1Q8NFW1 1626 aaPredicted RBP18.78■□□□□ 0.6
IFT140-204ENST00000439987 GIGYF1O75420 1035 aaPredicted RBP18.78■□□□□ 0.6
IFT140-204ENST00000439987 SLC4A10Q6U841 1118 aa18.78■□□□□ 0.6
IFT140-204ENST00000439987 MRC1P22897 1456 aa18.77■□□□□ 0.6
IFT140-204ENST00000439987 NFATC2IPQ8NCF5 419 aa18.77■□□□□ 0.6
IFT140-204ENST00000439987 IL2RBP14784 551 aa18.77■□□□□ 0.59
IFT140-204ENST00000439987 ZCRB1Q8TBF4 217 aaKnown RBP18.77■□□□□ 0.59
IFT140-204ENST00000439987 PCDH11XQ9BZA7 1347 aa18.76■□□□□ 0.59
IFT140-204ENST00000439987 PCDH11YQ9BZA8 1340 aa18.76■□□□□ 0.59
IFT140-204ENST00000439987 ZNF790Q6PG37 636 aa18.76■□□□□ 0.59
IFT140-204ENST00000439987 SIRT2Q8IXJ6 389 aa18.76■□□□□ 0.59
IFT140-204ENST00000439987 CHPF2Q9P2E5 772 aa18.76■□□□□ 0.59
IFT140-204ENST00000439987 FAM161AQ3B820 660 aa18.76■□□□□ 0.59
IFT140-204ENST00000439987 BTG4Q9NY30 223 aa18.76■□□□□ 0.59
IFT140-204ENST00000439987 PHAXQ9H814 394 aaKnown RBP18.75■□□□□ 0.59
IFT140-204ENST00000439987 COL14A1Q05707 1796 aaKnown RBP18.75■□□□□ 0.59
IFT140-204ENST00000439987 MEIS3Q99687 375 aa18.75■□□□□ 0.59
IFT140-204ENST00000439987 PXDNLA1KZ92 1463 aa18.74■□□□□ 0.59
IFT140-204ENST00000439987 SLC39A6Q13433 755 aa18.74■□□□□ 0.59
IFT140-204ENST00000439987 C8orf34Q49A92 452 aa18.74■□□□□ 0.59
IFT140-204ENST00000439987 GCC1Q96CN9 775 aa18.74■□□□□ 0.59
IFT140-204ENST00000439987 DBF4Q9UBU7 674 aaPredicted RBP18.73■□□□□ 0.59
IFT140-204ENST00000439987 PHLPP1O60346 1717 aa18.73■□□□□ 0.59
IFT140-204ENST00000439987 ATP10DQ9P241 1426 aa18.73■□□□□ 0.59
IFT140-204ENST00000439987 COL16A1Q07092 1604 aaPredicted RBP18.72■□□□□ 0.59
IFT140-204ENST00000439987 PRKCSHP14314 528 aaPredicted RBP18.72■□□□□ 0.59
IFT140-204ENST00000439987 NUCB1Q02818 461 aa18.72■□□□□ 0.59
IFT140-204ENST00000439987 N4BP2Q86UW6 1770 aaPredicted RBP18.72■□□□□ 0.59
IFT140-204ENST00000439987 PRAMEF22A3QJZ6 481 aa18.72■□□□□ 0.59
IFT140-204ENST00000439987 RPAP2Q8IXW5 612 aaPredicted RBP18.72■□□□□ 0.59
IFT140-204ENST00000439987 TOM1O60784 492 aa18.71■□□□□ 0.59
IFT140-204ENST00000439987 CABP4P57796 275 aa18.71■□□□□ 0.59
IFT140-204ENST00000439987 ANKRD44Q8N8A2 993 aa18.71■□□□□ 0.59
IFT140-204ENST00000439987 ANP32AP39687 249 aaKnown RBP18.7■□□□□ 0.58
IFT140-204ENST00000439987 NKX1-1Q15270 411 aaPredicted RBP18.7■□□□□ 0.58
IFT140-204ENST00000439987 CEP85Q6P2H3 762 aa18.7■□□□□ 0.58
IFT140-204ENST00000439987 USP35Q9P2H5 1018 aa18.7■□□□□ 0.58
IFT140-204ENST00000439987 SHANK3Q9BYB0 1731 aa18.7■□□□□ 0.58
IFT140-204ENST00000439987 ANXA1P04083 346 aa18.7■□□□□ 0.58
IFT140-204ENST00000439987 TTC5Q8N0Z6 440 aa18.7■□□□□ 0.58
IFT140-204ENST00000439987 CHD1LQ86WJ1 897 aa18.69■□□□□ 0.58
IFT140-204ENST00000439987 ZNF496Q96IT1 587 aaPredicted RBP18.69■□□□□ 0.58
IFT140-204ENST00000439987 IPO9Q96P70 1041 aaKnown RBP18.69■□□□□ 0.58
IFT140-204ENST00000439987 ERVV-2B6SEH9 535 aa18.68■□□□□ 0.58
IFT140-204ENST00000439987 GNAI3P08754 354 aa18.68■□□□□ 0.58
IFT140-204ENST00000439987 PIP4K2BP78356 416 aa18.68■□□□□ 0.58
IFT140-204ENST00000439987 RTL5Q5HYW3 569 aaPredicted RBP18.68■□□□□ 0.58
IFT140-204ENST00000439987 DDX54Q8TDD1 881 aaKnown RBP18.68■□□□□ 0.58
IFT140-204ENST00000439987 C5P01031 1676 aa18.68■□□□□ 0.58
IFT140-204ENST00000439987 PROSER3Q2NL68 480 aa18.67■□□□□ 0.58
IFT140-204ENST00000439987 HYPKQ9NX55 129 aa18.67■□□□□ 0.58
IFT140-204ENST00000439987 PI4KAP2A4QPH2 592 aa18.67■□□□□ 0.58
IFT140-204ENST00000439987 GNAI2P04899 355 aa18.67■□□□□ 0.58
IFT140-204ENST00000439987 NBR1Q14596 966 aa18.67■□□□□ 0.58
IFT140-204ENST00000439987 PI4KAP1Q8N8J0 262 aa18.67■□□□□ 0.58
IFT140-204ENST00000439987 DNAAF4Q8WXU2 420 aa18.67■□□□□ 0.58
IFT140-204ENST00000439987 LNPKQ9C0E8 428 aa18.67■□□□□ 0.58
IFT140-204ENST00000439987 DCTPP1Q9H773 170 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 857.2 ms