RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 KCNQ3O43525 872 aa9.74□□□□□ -0.85
UBR3-205ENST00000439681 PRIM1P49642 420 aaKnown RBP9.74□□□□□ -0.85
UBR3-205ENST00000439681 KRT27Q7Z3Y8 459 aa9.74□□□□□ -0.85
UBR3-205ENST00000439681 FANCIQ9NVI1 1328 aa9.74□□□□□ -0.85
UBR3-205ENST00000439681 ADAMTS7Q9UKP4 1686 aa9.74□□□□□ -0.85
UBR3-205ENST00000439681 WNK3Q9BYP7 1800 aa9.74□□□□□ -0.85
UBR3-205ENST00000439681 BTBD11A6QL63 1104 aa9.74□□□□□ -0.85
UBR3-205ENST00000439681 PIGBQ92521 554 aa9.74□□□□□ -0.85
UBR3-205ENST00000439681 TSPYL4Q9UJ04 414 aa9.74□□□□□ -0.85
UBR3-205ENST00000439681 KCNQ2O43526 872 aa9.73□□□□□ -0.85
UBR3-205ENST00000439681 ACSBG1Q96GR2 724 aa9.73□□□□□ -0.85
UBR3-205ENST00000439681 BCL9O00512 1426 aa9.73□□□□□ -0.85
UBR3-205ENST00000439681 RGS12O14924 1447 aa9.73□□□□□ -0.85
UBR3-205ENST00000439681 SLC39A6Q13433 755 aa9.73□□□□□ -0.85
UBR3-205ENST00000439681 MRC1P22897 1456 aa9.72□□□□□ -0.85
UBR3-205ENST00000439681 DLG5Q8TDM6 1919 aa9.72□□□□□ -0.85
UBR3-205ENST00000439681 EXOSC9Q06265 439 aaKnown RBP9.72□□□□□ -0.85
UBR3-205ENST00000439681 PTF1AQ7RTS3 328 aa9.72□□□□□ -0.85
UBR3-205ENST00000439681 TMOD3Q9NYL9 352 aa9.72□□□□□ -0.85
UBR3-205ENST00000439681 EIF4A1P60842 406 aaKnown RBP9.71□□□□□ -0.85
UBR3-205ENST00000439681 KRT24Q2M2I5 525 aa9.71□□□□□ -0.85
UBR3-205ENST00000439681 ZNF790Q6PG37 636 aa9.71□□□□□ -0.85
UBR3-205ENST00000439681 C8orf58Q8NAV2 365 aa9.71□□□□□ -0.85
UBR3-205ENST00000439681 FAM196AQ6ZSG2 479 aa9.71□□□□□ -0.86
UBR3-205ENST00000439681 TSPYL6Q8N831 410 aa9.71□□□□□ -0.86
UBR3-205ENST00000439681 SYTL4Q96C24 671 aaPredicted RBP9.71□□□□□ -0.86
UBR3-205ENST00000439681 ATG3Q9NT62 314 aa9.71□□□□□ -0.86
UBR3-205ENST00000439681 ASAP1Q9ULH1 1129 aa9.71□□□□□ -0.86
UBR3-205ENST00000439681 HEG1Q9ULI3 1381 aa9.7□□□□□ -0.86
UBR3-205ENST00000439681 VAMP4O75379 141 aa9.7□□□□□ -0.86
UBR3-205ENST00000439681 ELL2O00472 640 aaPredicted RBP9.69□□□□□ -0.86
UBR3-205ENST00000439681 ZNF496Q96IT1 587 aaPredicted RBP9.69□□□□□ -0.86
UBR3-205ENST00000439681 TOGARAM1Q9Y4F4 1720 aa9.69□□□□□ -0.86
UBR3-205ENST00000439681 CENPBP07199 599 aaPredicted RBP9.68□□□□□ -0.86
UBR3-205ENST00000439681 BCL11BQ9C0K0 894 aaPredicted RBP9.68□□□□□ -0.86
UBR3-205ENST00000439681 SCN11AQ9UI33 1791 aa9.68□□□□□ -0.86
UBR3-205ENST00000439681 GIGYF1O75420 1035 aaPredicted RBP9.68□□□□□ -0.86
UBR3-205ENST00000439681 TWISTNBQ3B726 338 aaPredicted RBP9.68□□□□□ -0.86
UBR3-205ENST00000439681 PRAMEF22A3QJZ6 481 aa9.67□□□□□ -0.86
UBR3-205ENST00000439681 PTCD1O75127 700 aaKnown RBP9.67□□□□□ -0.86
UBR3-205ENST00000439681 CT47B1P0C2W7 299 aaPredicted RBP9.67□□□□□ -0.86
UBR3-205ENST00000439681 TTC5Q8N0Z6 440 aa9.67□□□□□ -0.86
UBR3-205ENST00000439681 FMNL2Q96PY5 1086 aa9.67□□□□□ -0.86
UBR3-205ENST00000439681 SLC4A9Q96Q91 983 aa9.67□□□□□ -0.86
UBR3-205ENST00000439681 TRIM37O94972 964 aa9.67□□□□□ -0.86
UBR3-205ENST00000439681 RARSP54136 660 aaKnown RBP9.66□□□□□ -0.86
UBR3-205ENST00000439681 RCAN3Q9UKA8 241 aa9.66□□□□□ -0.86
UBR3-205ENST00000439681 SIPA1L3O60292 1781 aaPredicted RBP9.66□□□□□ -0.86
UBR3-205ENST00000439681 HOXB7P09629 217 aa9.65□□□□□ -0.86
UBR3-205ENST00000439681 SNRPA1P09661 255 aaKnown RBP9.65□□□□□ -0.86
UBR3-205ENST00000439681 SMARCC1Q92922 1105 aaPredicted RBP9.65□□□□□ -0.86
UBR3-205ENST00000439681 SOS1Q07889 1333 aaPredicted RBP9.65□□□□□ -0.86
UBR3-205ENST00000439681 KCPQ6ZWJ8 1503 aa9.65□□□□□ -0.86
UBR3-205ENST00000439681 VSIG10Q8N0Z9 540 aa9.65□□□□□ -0.86
UBR3-205ENST00000439681 SSH1Q8WYL5 1049 aa9.65□□□□□ -0.86
UBR3-205ENST00000439681 RBM42Q9BTD8 480 aaKnown RBP9.65□□□□□ -0.86
UBR3-205ENST00000439681 USP16Q9Y5T5 823 aa9.65□□□□□ -0.86
UBR3-205ENST00000439681 BRWD3Q6RI45 1802 aa9.64□□□□□ -0.87
UBR3-205ENST00000439681 BCAR3O75815 825 aa9.64□□□□□ -0.87
UBR3-205ENST00000439681 ZNF428Q96B54 188 aa9.64□□□□□ -0.87
UBR3-205ENST00000439681 PALLDQ8WX93 1383 aa9.64□□□□□ -0.87
UBR3-205ENST00000439681 DOT1LQ8TEK3 1739 aa9.64□□□□□ -0.87
UBR3-205ENST00000439681 KDM3BQ7LBC6 1761 aa9.64□□□□□ -0.87
UBR3-205ENST00000439681 LOC102724428A0A0B4J2F2 783 aa9.64□□□□□ -0.87
UBR3-205ENST00000439681 TCERG1O14776 1098 aaKnown RBP9.64□□□□□ -0.87
UBR3-205ENST00000439681 SIK1P57059 783 aa9.64□□□□□ -0.87
UBR3-205ENST00000439681 EIF2S2P20042 333 aaKnown RBP9.63□□□□□ -0.87
UBR3-205ENST00000439681 ALDH1L2Q3SY69 923 aa9.63□□□□□ -0.87
UBR3-205ENST00000439681 DNAJC10Q8IXB1 793 aa9.63□□□□□ -0.87
UBR3-205ENST00000439681 MRPL50Q8N5N7 158 aaKnown RBP9.63□□□□□ -0.87
UBR3-205ENST00000439681 NECTIN2Q92692 538 aa9.63□□□□□ -0.87
UBR3-205ENST00000439681 ITPK1Q13572 414 aa9.63□□□□□ -0.87
UBR3-205ENST00000439681 PDIA6Q15084 440 aa9.63□□□□□ -0.87
UBR3-205ENST00000439681 HDGFL1Q5TGJ6 251 aa9.63□□□□□ -0.87
UBR3-205ENST00000439681 BCL2L13Q9BXK5 485 aa9.63□□□□□ -0.87
UBR3-205ENST00000439681 PAPPAQ13219 1627 aa9.62□□□□□ -0.87
UBR3-205ENST00000439681 BRPF1P55201 1214 aaPredicted RBP9.62□□□□□ -0.87
UBR3-205ENST00000439681 CCDC30Q5VVM6 783 aa9.62□□□□□ -0.87
UBR3-205ENST00000439681 TEX13AQ9BXU3 409 aaPredicted RBP9.62□□□□□ -0.87
UBR3-205ENST00000439681 SUPT16HQ9Y5B9 1047 aaKnown RBP9.62□□□□□ -0.87
UBR3-205ENST00000439681 ITGB4P16144 1822 aa9.62□□□□□ -0.87
UBR3-205ENST00000439681 NHSQ6T4R5 1651 aa9.62□□□□□ -0.87
UBR3-205ENST00000439681 APBA3O96018 575 aa9.61□□□□□ -0.87
UBR3-205ENST00000439681 CYP19A1P11511 503 aaPredicted RBP9.61□□□□□ -0.87
UBR3-205ENST00000439681 ATP6V1AP38606 617 aa9.61□□□□□ -0.87
UBR3-205ENST00000439681 KCNQ4P56696 695 aa9.61□□□□□ -0.87
UBR3-205ENST00000439681 PROM2Q8N271 834 aa9.61□□□□□ -0.87
UBR3-205ENST00000439681 RNF123Q5XPI4 1314 aa9.61□□□□□ -0.87
UBR3-205ENST00000439681 NBPF26B4DH59 902 aa9.61□□□□□ -0.87
UBR3-205ENST00000439681 PLSCR1O15162 318 aa9.61□□□□□ -0.87
UBR3-205ENST00000439681 A1BGP04217 495 aa9.61□□□□□ -0.87
UBR3-205ENST00000439681 SLC4A2P04920 1241 aa9.61□□□□□ -0.87
UBR3-205ENST00000439681 PROSER3Q2NL68 480 aa9.61□□□□□ -0.87
UBR3-205ENST00000439681 NBPF14Q5TI25 921 aa9.61□□□□□ -0.87
UBR3-205ENST00000439681 NBPF10Q6P3W6 841 aaKnown RBP9.61□□□□□ -0.87
UBR3-205ENST00000439681 NBPF15Q8N660 670 aa9.61□□□□□ -0.87
UBR3-205ENST00000439681 SMC4Q9NTJ3 1288 aa9.61□□□□□ -0.87
UBR3-205ENST00000439681 CHPF2Q9P2E5 772 aa9.61□□□□□ -0.87
UBR3-205ENST00000439681 G2E3Q7L622 706 aa9.6□□□□□ -0.87
UBR3-205ENST00000439681 LRP10Q7Z4F1 713 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms