RNA–Protein interactions for RNA: ENST00000439220.6

CSK-202, Transcript of C-terminal Src kinase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSK, Length 1,900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSK-202ENST00000439220 SOCS7O14512 581 aa23.33■■□□□ 1.32
CSK-202ENST00000439220 HSP90AB1P08238 724 aaKnown RBP23.33■■□□□ 1.32
CSK-202ENST00000439220 TAF7Q15545 349 aaPredicted RBP23.33■■□□□ 1.32
CSK-202ENST00000439220 BCL9O00512 1426 aa23.33■■□□□ 1.32
CSK-202ENST00000439220 FAM196AQ6ZSG2 479 aa23.32■■□□□ 1.32
CSK-202ENST00000439220 EXOSC9Q06265 439 aaKnown RBP23.31■■□□□ 1.32
CSK-202ENST00000439220 TEFQ10587 303 aa23.31■■□□□ 1.32
CSK-202ENST00000439220 ADAMTS7Q9UKP4 1686 aa23.3■■□□□ 1.32
CSK-202ENST00000439220 TSPYL4Q9UJ04 414 aa23.29■■□□□ 1.32
CSK-202ENST00000439220 UPF1Q92900 1129 aaKnown RBP eCLIP23.29■■□□□ 1.323e-13■■■■□ 20.9
CSK-202ENST00000439220 SLC52A2Q9HAB3 445 aa23.29■■□□□ 1.32
CSK-202ENST00000439220 RCAN3Q9UKA8 241 aa23.29■■□□□ 1.32
CSK-202ENST00000439220 BABAM1Q9NWV8 329 aa23.27■■□□□ 1.32
CSK-202ENST00000439220 VIRMAQ69YN4 1812 aaKnown RBP23.27■■□□□ 1.32
CSK-202ENST00000439220 NFATC2IPQ8NCF5 419 aa23.27■■□□□ 1.32
CSK-202ENST00000439220 SUPT16HQ9Y5B9 1047 aaKnown RBP23.27■■□□□ 1.32
CSK-202ENST00000439220 TOGARAM1Q9Y4F4 1720 aa23.26■■□□□ 1.31
CSK-202ENST00000439220 ACSBG1Q96GR2 724 aa23.26■■□□□ 1.31
CSK-202ENST00000439220 KRT24Q2M2I5 525 aa23.25■■□□□ 1.31
CSK-202ENST00000439220 TSPYL6Q8N831 410 aa23.25■■□□□ 1.31
CSK-202ENST00000439220 C8orf58Q8NAV2 365 aa23.25■■□□□ 1.31
CSK-202ENST00000439220 BTBD11A6QL63 1104 aa23.25■■□□□ 1.31
CSK-202ENST00000439220 CCDC125Q86Z20 511 aa23.25■■□□□ 1.31
CSK-202ENST00000439220 KAT6BQ8WYB5 2073 aa23.25■■□□□ 1.31
CSK-202ENST00000439220 ERVV-2B6SEH9 535 aa23.24■■□□□ 1.31
CSK-202ENST00000439220 KCNQ3O43525 872 aa23.24■■□□□ 1.31
CSK-202ENST00000439220 SCN11AQ9UI33 1791 aa23.24■■□□□ 1.31
CSK-202ENST00000439220 DOT1LQ8TEK3 1739 aa23.24■■□□□ 1.31
CSK-202ENST00000439220 CABP4P57796 275 aa23.23■■□□□ 1.31
CSK-202ENST00000439220 MRC1P22897 1456 aa23.23■■□□□ 1.31
CSK-202ENST00000439220 SBF2Q86WG5 1849 aa23.23■■□□□ 1.31
CSK-202ENST00000439220 ELL2O00472 640 aaPredicted RBP23.23■■□□□ 1.31
CSK-202ENST00000439220 PTF1AQ7RTS3 328 aa23.21■■□□□ 1.31
CSK-202ENST00000439220 KCNQ2O43526 872 aa23.21■■□□□ 1.31
CSK-202ENST00000439220 VAMP4O75379 141 aa23.21■■□□□ 1.31
CSK-202ENST00000439220 CT47B1P0C2W7 299 aaPredicted RBP23.21■■□□□ 1.31
CSK-202ENST00000439220 PRIM1P49642 420 aaKnown RBP23.21■■□□□ 1.31
CSK-202ENST00000439220 TRIM37O94972 964 aa23.2■■□□□ 1.3
CSK-202ENST00000439220 RARSP54136 660 aaKnown RBP23.2■■□□□ 1.3
CSK-202ENST00000439220 SLC39A6Q13433 755 aa23.2■■□□□ 1.3
CSK-202ENST00000439220 TWISTNBQ3B726 338 aaPredicted RBP23.2■■□□□ 1.3
CSK-202ENST00000439220 SYTL4Q96C24 671 aaPredicted RBP23.2■■□□□ 1.3
CSK-202ENST00000439220 ITGB4P16144 1822 aa23.19■■□□□ 1.3
CSK-202ENST00000439220 EIF4A1P60842 406 aaKnown RBP23.19■■□□□ 1.3
CSK-202ENST00000439220 BCAR3O75815 825 aa23.18■■□□□ 1.3
CSK-202ENST00000439220 RNF123Q5XPI4 1314 aa23.18■■□□□ 1.3
CSK-202ENST00000439220 ZNF790Q6PG37 636 aa23.18■■□□□ 1.3
CSK-202ENST00000439220 BCL11BQ9C0K0 894 aaPredicted RBP23.18■■□□□ 1.3
CSK-202ENST00000439220 TNS1Q9HBL0 1735 aaKnown RBP23.17■■□□□ 1.3
CSK-202ENST00000439220 NHSQ6T4R5 1651 aa23.17■■□□□ 1.3
CSK-202ENST00000439220 PIGBQ92521 554 aa23.16■■□□□ 1.3
CSK-202ENST00000439220 SIPA1L3O60292 1781 aaPredicted RBP23.16■■□□□ 1.3
CSK-202ENST00000439220 TMOD3Q9NYL9 352 aa23.16■■□□□ 1.3
CSK-202ENST00000439220 BCL2L13Q9BXK5 485 aa23.15■■□□□ 1.3
CSK-202ENST00000439220 SSH1Q8WYL5 1049 aa23.14■■□□□ 1.3
CSK-202ENST00000439220 HEG1Q9ULI3 1381 aa23.14■■□□□ 1.29
CSK-202ENST00000439220 SF3B2Q13435 895 aaKnown RBP23.14■■□□□ 1.29
CSK-202ENST00000439220 KDM3BQ7LBC6 1761 aa23.13■■□□□ 1.29
CSK-202ENST00000439220 ZNF428Q96B54 188 aa23.12■■□□□ 1.29
CSK-202ENST00000439220 RRP1P56182 461 aaKnown RBP23.12■■□□□ 1.29
CSK-202ENST00000439220 ZNF496Q96IT1 587 aaPredicted RBP23.12■■□□□ 1.29
CSK-202ENST00000439220 TCERG1O14776 1098 aaKnown RBP23.11■■□□□ 1.29
CSK-202ENST00000439220 PLIN1O60240 522 aa23.11■■□□□ 1.29
CSK-202ENST00000439220 TTC5Q8N0Z6 440 aa23.11■■□□□ 1.29
CSK-202ENST00000439220 GIGYF1O75420 1035 aaPredicted RBP23.1■■□□□ 1.29
CSK-202ENST00000439220 ALDH1L2Q3SY69 923 aa23.1■■□□□ 1.29
CSK-202ENST00000439220 APBA3O96018 575 aa23.1■■□□□ 1.29
CSK-202ENST00000439220 SMC4Q9NTJ3 1288 aa23.1■■□□□ 1.29
CSK-202ENST00000439220 ASAP1Q9ULH1 1129 aa23.1■■□□□ 1.29
CSK-202ENST00000439220 BTAF1O14981 1849 aa23.09■■□□□ 1.29
CSK-202ENST00000439220 PRAMEF22A3QJZ6 481 aa23.09■■□□□ 1.29
CSK-202ENST00000439220 BAG6P46379 1132 aa23.09■■□□□ 1.29
CSK-202ENST00000439220 ATG3Q9NT62 314 aa23.09■■□□□ 1.29
CSK-202ENST00000439220 PLSCR1O15162 318 aa23.08■■□□□ 1.29
CSK-202ENST00000439220 SOS1Q07889 1333 aaPredicted RBP23.08■■□□□ 1.28
CSK-202ENST00000439220 DEFB132Q7Z7B7 95 aa23.08■■□□□ 1.28
CSK-202ENST00000439220 HOXB7P09629 217 aa23.07■■□□□ 1.28
CSK-202ENST00000439220 MRPL50Q8N5N7 158 aaKnown RBP23.07■■□□□ 1.28
CSK-202ENST00000439220 FMNL2Q96PY5 1086 aa23.07■■□□□ 1.28
CSK-202ENST00000439220 IRX6P78412 446 aaPredicted RBP23.06■■□□□ 1.28
CSK-202ENST00000439220 NECTIN2Q92692 538 aa23.06■■□□□ 1.28
CSK-202ENST00000439220 CAMKK2Q96RR4 588 aa23.06■■□□□ 1.28
CSK-202ENST00000439220 RGPD3A6NKT7 1758 aaPredicted RBP23.05■■□□□ 1.28
CSK-202ENST00000439220 RGPD4Q7Z3J3 1758 aa23.05■■□□□ 1.28
CSK-202ENST00000439220 PTCD1O75127 700 aaKnown RBP23.05■■□□□ 1.28
CSK-202ENST00000439220 BRPF1P55201 1214 aaPredicted RBP23.05■■□□□ 1.28
CSK-202ENST00000439220 EN1Q05925 392 aaPredicted RBP23.05■■□□□ 1.28
CSK-202ENST00000439220 PAPPAQ13219 1627 aa23.04■■□□□ 1.28
CSK-202ENST00000439220 KCPQ6ZWJ8 1503 aa23.04■■□□□ 1.28
CSK-202ENST00000439220 EIF2S2P20042 333 aaKnown RBP23.04■■□□□ 1.28
CSK-202ENST00000439220 HDGFL1Q5TGJ6 251 aa23.04■■□□□ 1.28
CSK-202ENST00000439220 FRAT1Q92837 279 aaPredicted RBP23.04■■□□□ 1.28
CSK-202ENST00000439220 SNRPA1P09661 255 aaKnown RBP23.03■■□□□ 1.28
CSK-202ENST00000439220 CCDC30Q5VVM6 783 aa23.03■■□□□ 1.28
CSK-202ENST00000439220 NOB1Q9ULX3 412 aaKnown RBP23.02■■□□□ 1.28
CSK-202ENST00000439220 EZH2Q15910 746 aaKnown RBP23.02■■□□□ 1.28
CSK-202ENST00000439220 C20orf194Q5TEA3 1177 aa23.02■■□□□ 1.28
CSK-202ENST00000439220 USP16Q9Y5T5 823 aa23.02■■□□□ 1.28
CSK-202ENST00000439220 SLC4A2P04920 1241 aa23.01■■□□□ 1.27
CSK-202ENST00000439220 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms