RNA–Protein interactions for RNA: ENST00000438888.5

PRAME-208, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 4

Gene PRAME, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-208ENST00000438888 ATP6V1AP38606 617 aa16.91■□□□□ 0.3
PRAME-208ENST00000438888 PANK3Q9H999 370 aa16.91■□□□□ 0.3
PRAME-208ENST00000438888 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.91■□□□□ 0.3
PRAME-208ENST00000438888 CD2APQ9Y5K6 639 aa16.91■□□□□ 0.3
PRAME-208ENST00000438888 SSFA2P28290 1259 aa16.9■□□□□ 0.3
PRAME-208ENST00000438888 ATG3Q9NT62 314 aa16.9■□□□□ 0.3
PRAME-208ENST00000438888 IGSF1Q8N6C5 1336 aa16.89■□□□□ 0.29
PRAME-208ENST00000438888 UBR3Q6ZT12 1888 aa16.88■□□□□ 0.29
PRAME-208ENST00000438888 RBM42Q9BTD8 480 aaKnown RBP16.88■□□□□ 0.29
PRAME-208ENST00000438888 DIEXFQ68CQ4 756 aaKnown RBP16.87■□□□□ 0.29
PRAME-208ENST00000438888 ZNF530Q6P9A1 599 aaPredicted RBP16.87■□□□□ 0.29
PRAME-208ENST00000438888 ATP10DQ9P241 1426 aa16.87■□□□□ 0.29
PRAME-208ENST00000438888 MORC1Q86VD1 984 aa16.86■□□□□ 0.29
PRAME-208ENST00000438888 PLEKHO1Q53GL0 409 aaPredicted RBP16.85■□□□□ 0.29
PRAME-208ENST00000438888 AEBP1Q8IUX7 1158 aa16.85■□□□□ 0.29
PRAME-208ENST00000438888 ZNF526Q8TF50 670 aaPredicted RBP16.85■□□□□ 0.29
PRAME-208ENST00000438888 KDRP35968 1356 aa16.85■□□□□ 0.29
PRAME-208ENST00000438888 MMP10P09238 476 aa16.84■□□□□ 0.29
PRAME-208ENST00000438888 SLC4A9Q96Q91 983 aa16.84■□□□□ 0.29
PRAME-208ENST00000438888 KDM6AO15550 1401 aaPredicted RBP16.84■□□□□ 0.29
PRAME-208ENST00000438888 HSP90AB1P08238 724 aaKnown RBP16.83■□□□□ 0.28
PRAME-208ENST00000438888 CABP4P57796 275 aa16.83■□□□□ 0.28
PRAME-208ENST00000438888 DCAF5Q96JK2 942 aa16.83■□□□□ 0.28
PRAME-208ENST00000438888 RTCBQ9Y3I0 505 aaKnown RBP16.83■□□□□ 0.28
PRAME-208ENST00000438888 ERVV-2B6SEH9 535 aa16.82■□□□□ 0.28
PRAME-208ENST00000438888 PLEKHG2Q9H7P9 1386 aa16.81■□□□□ 0.28
PRAME-208ENST00000438888 C1orf141Q5JVX7 400 aa16.81■□□□□ 0.28
PRAME-208ENST00000438888 TRAPPC3LQ5T215 181 aa16.81■□□□□ 0.28
PRAME-208ENST00000438888 KNSTRNQ9Y448 316 aa16.81■□□□□ 0.28
PRAME-208ENST00000438888 PTCD1O75127 700 aaKnown RBP16.8■□□□□ 0.28
PRAME-208ENST00000438888 MTHFSP49914 203 aa16.8■□□□□ 0.28
PRAME-208ENST00000438888 AMOTQ4VCS5 1084 aa16.8■□□□□ 0.28
PRAME-208ENST00000438888 SULT6B1Q6IMI4 303 aa16.8■□□□□ 0.28
PRAME-208ENST00000438888 GPBP1L1Q9HC44 474 aaPredicted RBP16.8■□□□□ 0.28
PRAME-208ENST00000438888 CICQ96RK0 1608 aaPredicted RBP16.79■□□□□ 0.28
PRAME-208ENST00000438888 ADCY9O60503 1353 aa16.78■□□□□ 0.28
PRAME-208ENST00000438888 PER1O15534 1290 aaPredicted RBP16.78■□□□□ 0.28
PRAME-208ENST00000438888 ARHGEF1Q92888 912 aaKnown RBP16.78■□□□□ 0.28
PRAME-208ENST00000438888 PXDNLA1KZ92 1463 aa16.78■□□□□ 0.28
PRAME-208ENST00000438888 CNTNAP4Q9C0A0 1308 aa16.77■□□□□ 0.28
PRAME-208ENST00000438888 RFC4P35249 363 aa16.77■□□□□ 0.28
PRAME-208ENST00000438888 A0A0G2JLW4 131 aa16.76■□□□□ 0.27
PRAME-208ENST00000438888 NLGN1Q8N2Q7 840 aa16.76■□□□□ 0.27
PRAME-208ENST00000438888 NFATC2IPQ8NCF5 419 aa16.76■□□□□ 0.27
PRAME-208ENST00000438888 BCS1LQ9Y276 419 aa16.76■□□□□ 0.27
PRAME-208ENST00000438888 RPS6KA4O75676 772 aa16.75■□□□□ 0.27
PRAME-208ENST00000438888 GYS1P13807 737 aa16.75■□□□□ 0.27
PRAME-208ENST00000438888 ADRA2BP18089 450 aa16.75■□□□□ 0.27
PRAME-208ENST00000438888 IL13P35225 146 aa16.75■□□□□ 0.27
PRAME-208ENST00000438888 RC3H1Q5TC82 1133 aaKnown RBP16.75■□□□□ 0.27
PRAME-208ENST00000438888 C10orf71Q711Q0 1435 aa16.75■□□□□ 0.27
PRAME-208ENST00000438888 COL5A3P25940 1745 aaPredicted RBP16.75■□□□□ 0.27
PRAME-208ENST00000438888 CRKLP46109 303 aaKnown RBP16.74■□□□□ 0.27
PRAME-208ENST00000438888 CCDC87Q9NVE4 849 aa16.74■□□□□ 0.27
PRAME-208ENST00000438888 SRP68Q9UHB9 627 aaKnown RBP16.74■□□□□ 0.27
PRAME-208ENST00000438888 PARP3Q9Y6F1 533 aa16.74■□□□□ 0.27
PRAME-208ENST00000438888 ANP32CO43423 234 aa16.73■□□□□ 0.27
PRAME-208ENST00000438888 HMOX1P09601 288 aa16.73■□□□□ 0.27
PRAME-208ENST00000438888 CNGB1Q14028 1251 aaPredicted RBP16.73■□□□□ 0.27
PRAME-208ENST00000438888 NPC1L1Q9UHC9 1359 aa16.73■□□□□ 0.27
PRAME-208ENST00000438888 CEP350Q5VT06 3117 aa16.72■□□□□ 0.27
PRAME-208ENST00000438888 ZNF831Q5JPB2 1677 aa16.72■□□□□ 0.27
PRAME-208ENST00000438888 DPEP1P16444 411 aa16.72■□□□□ 0.27
PRAME-208ENST00000438888 TGFB2P61812 414 aa16.72■□□□□ 0.27
PRAME-208ENST00000438888 AMER1Q5JTC6 1135 aaPredicted RBP16.72■□□□□ 0.27
PRAME-208ENST00000438888 C4AP0C0L4 1744 aa16.72■□□□□ 0.27
PRAME-208ENST00000438888 N4BP2Q86UW6 1770 aaPredicted RBP16.72■□□□□ 0.27
PRAME-208ENST00000438888 KIAA1551Q9HCM1 1747 aa16.7■□□□□ 0.26
PRAME-208ENST00000438888 FCHSD2O94868 740 aa16.7■□□□□ 0.26
PRAME-208ENST00000438888 FKBP8Q14318 412 aa16.7■□□□□ 0.26
PRAME-208ENST00000438888 AKAP4Q5JQC9 854 aa16.7■□□□□ 0.26
PRAME-208ENST00000438888 CC2D1BQ5T0F9 858 aaKnown RBP16.7■□□□□ 0.26
PRAME-208ENST00000438888 ARHGAP27Q6ZUM4 889 aa16.7■□□□□ 0.26
PRAME-208ENST00000438888 DNAJC10Q8IXB1 793 aa16.7■□□□□ 0.26
PRAME-208ENST00000438888 LGR6Q9HBX8 967 aa16.7■□□□□ 0.26
PRAME-208ENST00000438888 USP42Q9H9J4 1324 aaKnown RBP16.7■□□□□ 0.26
PRAME-208ENST00000438888 MYH14Q7Z406 1995 aaKnown RBP16.69■□□□□ 0.26
PRAME-208ENST00000438888 SLC39A6Q13433 755 aa16.69■□□□□ 0.26
PRAME-208ENST00000438888 SLC52A2Q9HAB3 445 aa16.69■□□□□ 0.26
PRAME-208ENST00000438888 TJP1Q07157 1748 aa16.69■□□□□ 0.26
PRAME-208ENST00000438888 KIF13BQ9NQT8 1826 aa16.68■□□□□ 0.26
PRAME-208ENST00000438888 DDR1Q08345 913 aa16.68■□□□□ 0.26
PRAME-208ENST00000438888 RNMTO43148 476 aaKnown RBP16.67■□□□□ 0.26
PRAME-208ENST00000438888 INTS5Q6P9B9 1019 aaKnown RBP16.67■□□□□ 0.26
PRAME-208ENST00000438888 PRKRIP1Q9H875 184 aaPredicted RBP16.67■□□□□ 0.26
PRAME-208ENST00000438888 KIF3CO14782 793 aa16.66■□□□□ 0.26
PRAME-208ENST00000438888 HSPA6P17066 643 aa16.66■□□□□ 0.26
PRAME-208ENST00000438888 RALBP1Q15311 655 aa16.66■□□□□ 0.26
PRAME-208ENST00000438888 SCN11AQ9UI33 1791 aa16.66■□□□□ 0.26
PRAME-208ENST00000438888 DIAPH1O60610 1272 aaKnown RBP16.65■□□□□ 0.26
PRAME-208ENST00000438888 ZPR1O75312 459 aa16.65■□□□□ 0.26
PRAME-208ENST00000438888 CHRNA5P30532 468 aa16.65■□□□□ 0.26
PRAME-208ENST00000438888 MTHFSDQ2M296 383 aaKnown RBP16.65■□□□□ 0.26
PRAME-208ENST00000438888 USPL1Q5W0Q7 1092 aa16.65■□□□□ 0.26
PRAME-208ENST00000438888 MIER1Q8N108 512 aa16.65■□□□□ 0.26
PRAME-208ENST00000438888 KCNA3P22001 575 aa16.64■□□□□ 0.25
PRAME-208ENST00000438888 MRC1P22897 1456 aa16.64■□□□□ 0.25
PRAME-208ENST00000438888 SOS1Q07889 1333 aaPredicted RBP16.64■□□□□ 0.25
PRAME-208ENST00000438888 PIM2Q9P1W9 311 aa16.63■□□□□ 0.25
PRAME-208ENST00000438888 ZBTB1Q9Y2K1 713 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms