RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CEMIPQ8WUJ3 1361 aa17.4■□□□□ 0.38
PTCHD3-201ENST00000438700 TBC1D32Q96NH3 1257 aa17.4■□□□□ 0.38
PTCHD3-201ENST00000438700 FAM208AQ9UK61 1670 aaKnown RBP17.4■□□□□ 0.38
PTCHD3-201ENST00000438700 ABCA3Q99758 1704 aa17.4■□□□□ 0.38
PTCHD3-201ENST00000438700 CSB-PGBD3P0DP91 1061 aa17.4■□□□□ 0.38
PTCHD3-201ENST00000438700 TAF7Q15545 349 aaPredicted RBP17.4■□□□□ 0.38
PTCHD3-201ENST00000438700 AKAP4Q5JQC9 854 aa17.4■□□□□ 0.38
PTCHD3-201ENST00000438700 LGR6Q9HBX8 967 aa17.39■□□□□ 0.37
PTCHD3-201ENST00000438700 ABCC4O15439 1325 aa17.39■□□□□ 0.37
PTCHD3-201ENST00000438700 MFAP1P55081 439 aaKnown RBP17.39■□□□□ 0.37
PTCHD3-201ENST00000438700 NUCB1Q02818 461 aa17.39■□□□□ 0.37
PTCHD3-201ENST00000438700 SLKQ9H2G2 1235 aaPredicted RBP17.38■□□□□ 0.37
PTCHD3-201ENST00000438700 C1orf141Q5JVX7 400 aa17.38■□□□□ 0.37
PTCHD3-201ENST00000438700 MPRIPQ6WCQ1 1025 aa17.37■□□□□ 0.37
PTCHD3-201ENST00000438700 BECN1Q14457 450 aa17.37■□□□□ 0.37
PTCHD3-201ENST00000438700 CHD1LQ86WJ1 897 aa17.37■□□□□ 0.37
PTCHD3-201ENST00000438700 RAPGEF4Q8WZA2 1011 aa17.37■□□□□ 0.37
PTCHD3-201ENST00000438700 PRDM11Q9NQV5 511 aa17.37■□□□□ 0.37
PTCHD3-201ENST00000438700 BABAM1Q9NWV8 329 aa17.37■□□□□ 0.37
PTCHD3-201ENST00000438700 ANKRD45Q5TZF3 282 aa17.36■□□□□ 0.37
PTCHD3-201ENST00000438700 API5Q9BZZ5 524 aaKnown RBP17.36■□□□□ 0.37
PTCHD3-201ENST00000438700 MEGF6O75095 1541 aa17.35■□□□□ 0.37
PTCHD3-201ENST00000438700 SIRT2Q8IXJ6 389 aa17.35■□□□□ 0.37
PTCHD3-201ENST00000438700 CHMP4BQ9H444 224 aaKnown RBP17.35■□□□□ 0.37
PTCHD3-201ENST00000438700 KDM3BQ7LBC6 1761 aa17.34■□□□□ 0.37
PTCHD3-201ENST00000438700 LTBP4Q8N2S1 1624 aa17.34■□□□□ 0.37
PTCHD3-201ENST00000438700 TEFQ10587 303 aa17.34■□□□□ 0.37
PTCHD3-201ENST00000438700 ARXQ96QS3 562 aa17.34■□□□□ 0.37
PTCHD3-201ENST00000438700 ROBO1Q9Y6N7 1651 aa17.34■□□□□ 0.37
PTCHD3-201ENST00000438700 RNMTO43148 476 aaKnown RBP17.34■□□□□ 0.37
PTCHD3-201ENST00000438700 SLC4A2P04920 1241 aa17.34■□□□□ 0.37
PTCHD3-201ENST00000438700 TATP17735 454 aaPredicted RBP17.33■□□□□ 0.36
PTCHD3-201ENST00000438700 RGS12O14924 1447 aa17.33■□□□□ 0.36
PTCHD3-201ENST00000438700 C22orf23Q9BZE7 217 aa17.32■□□□□ 0.36
PTCHD3-201ENST00000438700 OVOS2A0A0G2JMS6 1433 aa17.32■□□□□ 0.36
PTCHD3-201ENST00000438700 GCC1Q96CN9 775 aa17.31■□□□□ 0.36
PTCHD3-201ENST00000438700 TBC1D2Q9BYX2 928 aa17.31■□□□□ 0.36
PTCHD3-201ENST00000438700 ADAMTS7Q9UKP4 1686 aa17.31■□□□□ 0.36
PTCHD3-201ENST00000438700 PTPRCP08575 1304 aa17.31■□□□□ 0.36
PTCHD3-201ENST00000438700 NECTIN2Q92692 538 aa17.3■□□□□ 0.36
PTCHD3-201ENST00000438700 COL5A2P05997 1499 aaPredicted RBP17.3■□□□□ 0.36
PTCHD3-201ENST00000438700 BTBD11A6QL63 1104 aa17.3■□□□□ 0.36
PTCHD3-201ENST00000438700 STK31Q9BXU1 1019 aa17.3■□□□□ 0.36
PTCHD3-201ENST00000438700 WDR17Q8IZU2 1322 aa17.3■□□□□ 0.36
PTCHD3-201ENST00000438700 SIPA1L3O60292 1781 aaPredicted RBP17.3■□□□□ 0.36
PTCHD3-201ENST00000438700 KCNQ3O43525 872 aa17.29■□□□□ 0.36
PTCHD3-201ENST00000438700 CCDC30Q5VVM6 783 aa17.29■□□□□ 0.36
PTCHD3-201ENST00000438700 G2E3Q7L622 706 aa17.29■□□□□ 0.36
PTCHD3-201ENST00000438700 SPG7Q9UQ90 795 aa17.29■□□□□ 0.36
PTCHD3-201ENST00000438700 SOS1Q07889 1333 aaPredicted RBP17.29■□□□□ 0.36
PTCHD3-201ENST00000438700 PKD1L3Q7Z443 1732 aa17.29■□□□□ 0.36
PTCHD3-201ENST00000438700 SPRYD3Q8NCJ5 442 aa17.29■□□□□ 0.36
PTCHD3-201ENST00000438700 EIF4A1P60842 406 aaKnown RBP17.28■□□□□ 0.36
PTCHD3-201ENST00000438700 FAM43AQ8N2R8 423 aa17.28■□□□□ 0.36
PTCHD3-201ENST00000438700 CACNA1FO60840 1977 aa17.28■□□□□ 0.36
PTCHD3-201ENST00000438700 SCN11AQ9UI33 1791 aa17.28■□□□□ 0.36
PTCHD3-201ENST00000438700 TOM1L2Q6ZVM7 507 aa17.28■□□□□ 0.36
PTCHD3-201ENST00000438700 RRAGDQ9NQL2 400 aaPredicted RBP17.28■□□□□ 0.36
PTCHD3-201ENST00000438700 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.28■□□□□ 0.36
PTCHD3-201ENST00000438700 PHKG2P15735 406 aa17.27■□□□□ 0.36
PTCHD3-201ENST00000438700 UBE2Q2Q8WVN8 375 aa17.27■□□□□ 0.36
PTCHD3-201ENST00000438700 KDM6AO15550 1401 aaPredicted RBP17.27■□□□□ 0.36
PTCHD3-201ENST00000438700 AHDC1Q5TGY3 1603 aaPredicted RBP17.27■□□□□ 0.36
PTCHD3-201ENST00000438700 INTS3Q68E01 1043 aaKnown RBP17.27■□□□□ 0.36
PTCHD3-201ENST00000438700 HDGFL1Q5TGJ6 251 aa17.26■□□□□ 0.35
PTCHD3-201ENST00000438700 BMP2KLQ5H9B9 411 aa17.26■□□□□ 0.35
PTCHD3-201ENST00000438700 PLEKHG2Q9H7P9 1386 aa17.26■□□□□ 0.35
PTCHD3-201ENST00000438700 PARP4Q9UKK3 1724 aaKnown RBP17.26■□□□□ 0.35
PTCHD3-201ENST00000438700 STRN4Q9NRL3 753 aa17.25■□□□□ 0.35
PTCHD3-201ENST00000438700 IFNL2Q8IZJ0 200 aa17.25■□□□□ 0.35
PTCHD3-201ENST00000438700 CYP27B1O15528 508 aa17.24■□□□□ 0.35
PTCHD3-201ENST00000438700 FLIIQ13045 1269 aa17.24■□□□□ 0.35
PTCHD3-201ENST00000438700 F6X3S4 739 aa17.24■□□□□ 0.35
PTCHD3-201ENST00000438700 MEIS3Q99687 375 aa17.24■□□□□ 0.35
PTCHD3-201ENST00000438700 ANTXR1Q9H6X2 564 aa17.24■□□□□ 0.35
PTCHD3-201ENST00000438700 HOXB7P09629 217 aa17.23■□□□□ 0.35
PTCHD3-201ENST00000438700 EIF2S2P20042 333 aaKnown RBP17.23■□□□□ 0.35
PTCHD3-201ENST00000438700 SLC4A10Q6U841 1118 aa17.23■□□□□ 0.35
PTCHD3-201ENST00000438700 LARP1Q6PKG0 1096 aaKnown RBP17.23■□□□□ 0.35
PTCHD3-201ENST00000438700 APBB1O00213 710 aa17.22■□□□□ 0.35
PTCHD3-201ENST00000438700 EVA1CP58658 441 aa17.22■□□□□ 0.35
PTCHD3-201ENST00000438700 FKBP5Q13451 457 aaPredicted RBP17.22■□□□□ 0.35
PTCHD3-201ENST00000438700 ATP10DQ9P241 1426 aa17.22■□□□□ 0.35
PTCHD3-201ENST00000438700 CARD10Q9BWT7 1032 aa17.22■□□□□ 0.35
PTCHD3-201ENST00000438700 SLC52A2Q9HAB3 445 aa17.22■□□□□ 0.35
PTCHD3-201ENST00000438700 COL22A1Q8NFW1 1626 aaPredicted RBP17.21■□□□□ 0.35
PTCHD3-201ENST00000438700 CEP85Q6P2H3 762 aa17.21■□□□□ 0.35
PTCHD3-201ENST00000438700 DCAF5Q96JK2 942 aa17.21■□□□□ 0.35
PTCHD3-201ENST00000438700 DCTPP1Q9H773 170 aa17.21■□□□□ 0.35
PTCHD3-201ENST00000438700 TBC1D9Q6ZT07 1266 aa17.2■□□□□ 0.34
PTCHD3-201ENST00000438700 ANKRD44Q8N8A2 993 aa17.2■□□□□ 0.34
PTCHD3-201ENST00000438700 GZF1Q9H116 711 aaPredicted RBP17.2■□□□□ 0.34
PTCHD3-201ENST00000438700 C16orf71Q8IYS4 520 aaPredicted RBP17.2■□□□□ 0.34
PTCHD3-201ENST00000438700 NFATC2IPQ8NCF5 419 aa17.2■□□□□ 0.34
PTCHD3-201ENST00000438700 CHPF2Q9P2E5 772 aa17.2■□□□□ 0.34
PTCHD3-201ENST00000438700 PHLPP1O60346 1717 aa17.2■□□□□ 0.34
PTCHD3-201ENST00000438700 HEG1Q9ULI3 1381 aa17.2■□□□□ 0.34
PTCHD3-201ENST00000438700 MRC1P22897 1456 aa17.2■□□□□ 0.34
PTCHD3-201ENST00000438700 SLC39A6Q13433 755 aa17.19■□□□□ 0.34
PTCHD3-201ENST00000438700 PHAXQ9H814 394 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms