RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 WBP1LQ9NX94 342 aa9.29□□□□□ -0.92
SPEN-202ENST00000438066 LINC01559Q495D7 138 aa9.28□□□□□ -0.92
SPEN-202ENST00000438066 BPHLQ86WA6 291 aaPredicted RBP9.28□□□□□ -0.92
SPEN-202ENST00000438066 WNT2BQ93097 391 aa9.28□□□□□ -0.92
SPEN-202ENST00000438066 IFT140Q96RY7 1462 aa9.28□□□□□ -0.92
SPEN-202ENST00000438066 LSM11P83369 360 aaKnown RBP eCLIP9.28□□□□□ -0.92
SPEN-202ENST00000438066 EAPPQ56P03 285 aaPredicted RBP9.28□□□□□ -0.92
SPEN-202ENST00000438066 C4orf48Q5BLP8 95 aa9.28□□□□□ -0.92
SPEN-202ENST00000438066 ADAMTS12P58397 1594 aa9.27□□□□□ -0.92
SPEN-202ENST00000438066 ERCC6Q03468 1493 aa9.27□□□□□ -0.93
SPEN-202ENST00000438066 PTCD1O75127 700 aaKnown RBP9.27□□□□□ -0.93
SPEN-202ENST00000438066 NBPF20Q3BBV1 942 aa9.27□□□□□ -0.93
SPEN-202ENST00000438066 PPARGC1BQ86YN6 1023 aaKnown RBP9.27□□□□□ -0.93
SPEN-202ENST00000438066 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.27□□□□□ -0.93
SPEN-202ENST00000438066 ST18O60284 1047 aa9.26□□□□□ -0.93
SPEN-202ENST00000438066 RAB15P59190 212 aa9.26□□□□□ -0.93
SPEN-202ENST00000438066 RGL4Q8IZJ4 473 aa9.26□□□□□ -0.93
SPEN-202ENST00000438066 DRC1Q96MC2 740 aa9.26□□□□□ -0.93
SPEN-202ENST00000438066 C8orf37Q96NL8 207 aa9.26□□□□□ -0.93
SPEN-202ENST00000438066 EFCAB5A4FU69 1503 aa9.26□□□□□ -0.93
SPEN-202ENST00000438066 SREK1Q8WXA9 508 aaKnown RBP9.25□□□□□ -0.93
SPEN-202ENST00000438066 EIF4G3O43432 1585 aaKnown RBP9.25□□□□□ -0.93
SPEN-202ENST00000438066 ADH1BP00325 375 aa9.25□□□□□ -0.93
SPEN-202ENST00000438066 ZC3H6P61129 1189 aaKnown RBP9.25□□□□□ -0.93
SPEN-202ENST00000438066 ZNF511Q8NB15 262 aa9.25□□□□□ -0.93
SPEN-202ENST00000438066 OTUD5Q96G74 571 aa9.25□□□□□ -0.93
SPEN-202ENST00000438066 BCL11AQ9H165 835 aa9.25□□□□□ -0.93
SPEN-202ENST00000438066 HMGB1P09429 215 aaKnown RBP9.24□□□□□ -0.93
SPEN-202ENST00000438066 HSP90B1P14625 803 aaKnown RBP9.24□□□□□ -0.93
SPEN-202ENST00000438066 FAM177A1Q8N128 213 aaPredicted RBP9.24□□□□□ -0.93
SPEN-202ENST00000438066 HELQQ8TDG4 1101 aa9.24□□□□□ -0.93
SPEN-202ENST00000438066 SAMD9Q5K651 1589 aa9.23□□□□□ -0.93
SPEN-202ENST00000438066 ZNF608Q9ULD9 1512 aaPredicted RBP9.23□□□□□ -0.93
SPEN-202ENST00000438066 GRIN2BQ13224 1484 aa9.23□□□□□ -0.93
SPEN-202ENST00000438066 ESPNB1AK53 854 aa9.23□□□□□ -0.93
SPEN-202ENST00000438066 BACH2Q9BYV9 841 aa9.23□□□□□ -0.93
SPEN-202ENST00000438066 PPP1R1BQ9UD71 204 aaPredicted RBP9.23□□□□□ -0.93
SPEN-202ENST00000438066 AQRO60306 1485 aaKnown RBP eCLIP9.23□□□□□ -0.931e-14■□□□□ 10.6
SPEN-202ENST00000438066 M0R2N6 131 aa9.22□□□□□ -0.93
SPEN-202ENST00000438066 ZPR1O75312 459 aa9.22□□□□□ -0.93
SPEN-202ENST00000438066 MYCP01106 439 aaPredicted RBP9.22□□□□□ -0.93
SPEN-202ENST00000438066 P4HBP07237 508 aaKnown RBP9.22□□□□□ -0.93
SPEN-202ENST00000438066 COL19A1Q14993 1142 aa9.22□□□□□ -0.93
SPEN-202ENST00000438066 TMC7Q7Z402 723 aa9.22□□□□□ -0.93
SPEN-202ENST00000438066 PUS7Q96PZ0 661 aaKnown RBP9.22□□□□□ -0.93
SPEN-202ENST00000438066 ZNF358Q9NW07 568 aa9.22□□□□□ -0.93
SPEN-202ENST00000438066 FHAD1B1AJZ9 1412 aa9.22□□□□□ -0.93
SPEN-202ENST00000438066 NAALADL2Q58DX5 795 aa9.22□□□□□ -0.93
SPEN-202ENST00000438066 HS3ST6Q96QI5 342 aa9.22□□□□□ -0.93
SPEN-202ENST00000438066 CFAP43Q8NDM7 1665 aa9.21□□□□□ -0.94
SPEN-202ENST00000438066 POTEB3A0JP26 581 aa9.21□□□□□ -0.94
SPEN-202ENST00000438066 SCTRP47872 440 aa9.21□□□□□ -0.94
SPEN-202ENST00000438066 POTEBQ6S5H4 581 aa9.21□□□□□ -0.94
SPEN-202ENST00000438066 ANKRD13DQ6ZTN6 518 aa9.21□□□□□ -0.94
SPEN-202ENST00000438066 SEPT12Q8IYM1 358 aa9.21□□□□□ -0.94
SPEN-202ENST00000438066 PCDH10Q9P2E7 1040 aa9.21□□□□□ -0.94
SPEN-202ENST00000438066 PCF11O94913 1555 aaKnown RBP9.21□□□□□ -0.94
SPEN-202ENST00000438066 MAP3K1Q13233 1512 aa9.21□□□□□ -0.94
SPEN-202ENST00000438066 FAM13AO94988 1023 aa9.2□□□□□ -0.94
SPEN-202ENST00000438066 MPSTP25325 297 aa9.2□□□□□ -0.94
SPEN-202ENST00000438066 SCG3Q8WXD2 468 aaKnown RBP9.2□□□□□ -0.94
SPEN-202ENST00000438066 COL26A1Q96A83 441 aa9.2□□□□□ -0.94
SPEN-202ENST00000438066 SLC6A16Q9GZN6 736 aa9.2□□□□□ -0.94
SPEN-202ENST00000438066 ERCC5P28715 1186 aaPredicted RBP9.19□□□□□ -0.94
SPEN-202ENST00000438066 C9orf131Q5VYM1 1079 aa9.19□□□□□ -0.94
SPEN-202ENST00000438066 C1QTNF2Q9BXJ5 285 aa9.19□□□□□ -0.94
SPEN-202ENST00000438066 TIAM1Q13009 1591 aa9.19□□□□□ -0.94
SPEN-202ENST00000438066 TMEM229AB2RXF0 380 aa9.19□□□□□ -0.94
SPEN-202ENST00000438066 STAU1O95793 577 aaKnown RBP9.19□□□□□ -0.94
SPEN-202ENST00000438066 IGFBP4P22692 258 aa9.19□□□□□ -0.94
SPEN-202ENST00000438066 TNS4Q8IZW8 715 aa9.19□□□□□ -0.94
SPEN-202ENST00000438066 TMC1Q8TDI8 760 aa9.19□□□□□ -0.94
SPEN-202ENST00000438066 CHMP7Q8WUX9 453 aaPredicted RBP9.19□□□□□ -0.94
SPEN-202ENST00000438066 RBCK1Q9BYM8 510 aa9.19□□□□□ -0.94
SPEN-202ENST00000438066 FOXO3O43524 673 aa9.18□□□□□ -0.94
SPEN-202ENST00000438066 NDUFB5O43674 189 aa9.18□□□□□ -0.94
SPEN-202ENST00000438066 MRPL58Q14197 206 aaKnown RBP9.18□□□□□ -0.94
SPEN-202ENST00000438066 KCTD15Q96SI1 283 aaPredicted RBP9.18□□□□□ -0.94
SPEN-202ENST00000438066 IQGAP2Q13576 1575 aa9.18□□□□□ -0.94
SPEN-202ENST00000438066 NPR3P17342 541 aa9.17□□□□□ -0.94
SPEN-202ENST00000438066 FAM161BQ96MY7 647 aa9.17□□□□□ -0.94
SPEN-202ENST00000438066 MTRQ99707 1265 aa9.17□□□□□ -0.94
SPEN-202ENST00000438066 ESF1Q9H501 851 aaKnown RBP9.17□□□□□ -0.94
SPEN-202ENST00000438066 CDV3Q9UKY7 258 aaKnown RBP9.17□□□□□ -0.94
SPEN-202ENST00000438066 SNAPC4Q5SXM2 1469 aa9.17□□□□□ -0.94
SPEN-202ENST00000438066 FYCO1Q9BQS8 1478 aa9.17□□□□□ -0.94
SPEN-202ENST00000438066 TTBK1Q5TCY1 1321 aaPredicted RBP9.17□□□□□ -0.94
SPEN-202ENST00000438066 FHOD3Q2V2M9 1422 aa9.17□□□□□ -0.94
SPEN-202ENST00000438066 CCDC125Q86Z20 511 aa9.17□□□□□ -0.94
SPEN-202ENST00000438066 TRMT44Q8IYL2 757 aaKnown RBP9.17□□□□□ -0.94
SPEN-202ENST00000438066 VTI1AQ96AJ9 217 aa9.17□□□□□ -0.94
SPEN-202ENST00000438066 SAP130Q9H0E3 1048 aa9.17□□□□□ -0.94
SPEN-202ENST00000438066 BRPF3Q9ULD4 1205 aa9.17□□□□□ -0.94
SPEN-202ENST00000438066 FCF1Q9Y324 198 aaKnown RBP9.17□□□□□ -0.94
SPEN-202ENST00000438066 MAGI1Q96QZ7 1491 aaPredicted RBP9.16□□□□□ -0.94
SPEN-202ENST00000438066 TREHO43280 583 aa9.16□□□□□ -0.94
SPEN-202ENST00000438066 SH3BP2P78314 561 aa9.16□□□□□ -0.94
SPEN-202ENST00000438066 HDLBPQ00341 1268 aaKnown RBP9.16□□□□□ -0.94
SPEN-202ENST00000438066 AAMPQ13685 434 aa9.16□□□□□ -0.94
SPEN-202ENST00000438066 TSPAN10Q9H1Z9 355 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms