RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.01□□□□□ -0.17
PDLIM5-206ENST00000437932 TMX3Q96JJ7 454 aa14.01□□□□□ -0.17
PDLIM5-206ENST00000437932 CCDC39Q9UFE4 941 aa14.01□□□□□ -0.17
PDLIM5-206ENST00000437932 ATP6V1DQ9Y5K8 247 aa14.01□□□□□ -0.17
PDLIM5-206ENST00000437932 TET3O43151 1660 aa14□□□□□ -0.17
PDLIM5-206ENST00000437932 RAB3GAP1Q15042 981 aa14□□□□□ -0.17
PDLIM5-206ENST00000437932 SF3A1Q15459 793 aaKnown RBP14□□□□□ -0.17
PDLIM5-206ENST00000437932 PTPRCP08575 1304 aa14□□□□□ -0.17
PDLIM5-206ENST00000437932 PKP1Q13835 747 aa14□□□□□ -0.17
PDLIM5-206ENST00000437932 ZNF830Q96NB3 372 aaPredicted RBP14□□□□□ -0.17
PDLIM5-206ENST00000437932 CPA1P15085 419 aa14□□□□□ -0.17
PDLIM5-206ENST00000437932 DDX11Q96FC9 970 aa13.99□□□□□ -0.17
PDLIM5-206ENST00000437932 TCEANC2Q96MN5 208 aa13.99□□□□□ -0.17
PDLIM5-206ENST00000437932 PA2G4Q9UQ80 394 aaKnown RBP13.99□□□□□ -0.17
PDLIM5-206ENST00000437932 MAP3K2Q9Y2U5 619 aa13.99□□□□□ -0.17
PDLIM5-206ENST00000437932 PI4KAP2A4QPH2 592 aa13.99□□□□□ -0.17
PDLIM5-206ENST00000437932 APPP05067 770 aa13.99□□□□□ -0.17
PDLIM5-206ENST00000437932 PI4KAP1Q8N8J0 262 aa13.99□□□□□ -0.17
PDLIM5-206ENST00000437932 ARHGAP45Q92619 1136 aa13.99□□□□□ -0.17
PDLIM5-206ENST00000437932 USP26Q9BXU7 913 aa13.99□□□□□ -0.17
PDLIM5-206ENST00000437932 HSP90AB4PQ58FF6 505 aa13.99□□□□□ -0.17
PDLIM5-206ENST00000437932 MYOM2P54296 1465 aa13.99□□□□□ -0.17
PDLIM5-206ENST00000437932 QRICH2Q9H0J4 1663 aa13.99□□□□□ -0.17
PDLIM5-206ENST00000437932 DCTPP1Q9H773 170 aa13.99□□□□□ -0.17
PDLIM5-206ENST00000437932 WASHC4Q2M389 1173 aa13.98□□□□□ -0.17
PDLIM5-206ENST00000437932 CYP46A1Q9Y6A2 500 aa13.98□□□□□ -0.17
PDLIM5-206ENST00000437932 EYA1Q99502 592 aa13.98□□□□□ -0.17
PDLIM5-206ENST00000437932 EVA1CP58658 441 aa13.98□□□□□ -0.17
PDLIM5-206ENST00000437932 SNX21Q969T3 373 aa13.97□□□□□ -0.17
PDLIM5-206ENST00000437932 RNF20Q5VTR2 975 aa13.97□□□□□ -0.17
PDLIM5-206ENST00000437932 MYD88Q99836 296 aa13.97□□□□□ -0.17
PDLIM5-206ENST00000437932 UQCRHLA0A096LP55 91 aa13.97□□□□□ -0.17
PDLIM5-206ENST00000437932 UQCRHP07919 91 aa13.97□□□□□ -0.17
PDLIM5-206ENST00000437932 PRIM1P49642 420 aaKnown RBP13.97□□□□□ -0.17
PDLIM5-206ENST00000437932 NECAB1Q8N987 351 aa13.97□□□□□ -0.17
PDLIM5-206ENST00000437932 GOLGA6L19H0YKK7 550 aa13.97□□□□□ -0.17
PDLIM5-206ENST00000437932 CNPY2Q9Y2B0 182 aa13.96□□□□□ -0.17
PDLIM5-206ENST00000437932 WDR33Q9C0J8 1336 aaKnown RBP13.96□□□□□ -0.17
PDLIM5-206ENST00000437932 PNMA6EA0A0J9YXQ4 647 aa13.96□□□□□ -0.17
PDLIM5-206ENST00000437932 LARP1BQ659C4 914 aaKnown RBP13.96□□□□□ -0.17
PDLIM5-206ENST00000437932 THEMISQ8N1K5 641 aaPredicted RBP13.96□□□□□ -0.17
PDLIM5-206ENST00000437932 ZFYVE9O95405 1425 aa13.96□□□□□ -0.17
PDLIM5-206ENST00000437932 STRN4Q9NRL3 753 aa13.96□□□□□ -0.17
PDLIM5-206ENST00000437932 HDAC5Q9UQL6 1122 aa13.96□□□□□ -0.17
PDLIM5-206ENST00000437932 DNAAF4Q8WXU2 420 aa13.96□□□□□ -0.18
PDLIM5-206ENST00000437932 ESYT1Q9BSJ8 1104 aa13.96□□□□□ -0.18
PDLIM5-206ENST00000437932 BECN2A8MW95 431 aa13.95□□□□□ -0.18
PDLIM5-206ENST00000437932 MBD3O95983 291 aa13.95□□□□□ -0.18
PDLIM5-206ENST00000437932 PRKCSHP14314 528 aaPredicted RBP13.95□□□□□ -0.18
PDLIM5-206ENST00000437932 HTATSF1O43719 755 aaKnown RBP13.95□□□□□ -0.18
PDLIM5-206ENST00000437932 RBM25P49756 843 aaKnown RBP13.95□□□□□ -0.18
PDLIM5-206ENST00000437932 SLC39A6Q13433 755 aa13.95□□□□□ -0.18
PDLIM5-206ENST00000437932 SASS6Q6UVJ0 657 aa13.95□□□□□ -0.18
PDLIM5-206ENST00000437932 TNRQ92752 1358 aa13.95□□□□□ -0.18
PDLIM5-206ENST00000437932 MAP3K19Q56UN5 1328 aa13.95□□□□□ -0.18
PDLIM5-206ENST00000437932 MCM2P49736 904 aa13.95□□□□□ -0.18
PDLIM5-206ENST00000437932 PROSER2Q86WR7 435 aaPredicted RBP13.95□□□□□ -0.18
PDLIM5-206ENST00000437932 USP25Q9UHP3 1055 aa13.95□□□□□ -0.18
PDLIM5-206ENST00000437932 SIRT2Q8IXJ6 389 aa13.94□□□□□ -0.18
PDLIM5-206ENST00000437932 KIF1BPQ96EK5 621 aa13.94□□□□□ -0.18
PDLIM5-206ENST00000437932 CHMP4AQ9BY43 222 aa13.94□□□□□ -0.18
PDLIM5-206ENST00000437932 GJB2P29033 226 aa13.94□□□□□ -0.18
PDLIM5-206ENST00000437932 CWF19L2Q2TBE0 894 aaKnown RBP13.94□□□□□ -0.18
PDLIM5-206ENST00000437932 RNF17Q9BXT8 1623 aaKnown RBP13.94□□□□□ -0.18
PDLIM5-206ENST00000437932 METP08581 1390 aa13.94□□□□□ -0.18
PDLIM5-206ENST00000437932 ATP5J2-PTCD1G3V325 749 aa13.93□□□□□ -0.18
PDLIM5-206ENST00000437932 PTCD1O75127 700 aaKnown RBP13.93□□□□□ -0.18
PDLIM5-206ENST00000437932 ANTXR1Q9H6X2 564 aa13.93□□□□□ -0.18
PDLIM5-206ENST00000437932 GLI2P10070 1586 aa13.93□□□□□ -0.18
PDLIM5-206ENST00000437932 GUCY1B3Q02153 619 aa13.93□□□□□ -0.18
PDLIM5-206ENST00000437932 EFCAB6Q5THR3 1501 aa13.93□□□□□ -0.18
PDLIM5-206ENST00000437932 UHRF1BP1LA0JNW5 1464 aa13.93□□□□□ -0.18
PDLIM5-206ENST00000437932 PSMA5P28066 241 aa13.93□□□□□ -0.18
PDLIM5-206ENST00000437932 RAB11FIP4Q86YS3 637 aa13.93□□□□□ -0.18
PDLIM5-206ENST00000437932 FMNL2Q96PY5 1086 aa13.93□□□□□ -0.18
PDLIM5-206ENST00000437932 ATF3P18847 181 aa13.92□□□□□ -0.18
PDLIM5-206ENST00000437932 FKBP4Q02790 459 aaKnown RBP eCLIP13.92□□□□□ -0.18
PDLIM5-206ENST00000437932 KLHL40Q2TBA0 621 aa13.92□□□□□ -0.18
PDLIM5-206ENST00000437932 USP48Q86UV5 1035 aa13.92□□□□□ -0.18
PDLIM5-206ENST00000437932 CKAP2LQ8IYA6 745 aa13.92□□□□□ -0.18
PDLIM5-206ENST00000437932 ZSCAN30Q86W11 494 aa13.92□□□□□ -0.18
PDLIM5-206ENST00000437932 TRIM5Q9C035 493 aa13.92□□□□□ -0.18
PDLIM5-206ENST00000437932 CABP4P57796 275 aa13.92□□□□□ -0.18
PDLIM5-206ENST00000437932 RHPN1Q8TCX5 695 aa13.92□□□□□ -0.18
PDLIM5-206ENST00000437932 LRRC2Q9BYS8 371 aa13.92□□□□□ -0.18
PDLIM5-206ENST00000437932 TSPOAP1O95153 1857 aa13.92□□□□□ -0.18
PDLIM5-206ENST00000437932 PHF8Q9UPP1 1060 aa13.92□□□□□ -0.18
PDLIM5-206ENST00000437932 ZMYM3Q14202 1370 aa13.92□□□□□ -0.18
PDLIM5-206ENST00000437932 PPRC1Q5VV67 1664 aaKnown RBP13.92□□□□□ -0.18
PDLIM5-206ENST00000437932 LGR6Q9HBX8 967 aa13.91□□□□□ -0.18
PDLIM5-206ENST00000437932 TFIP11Q9UBB9 837 aaKnown RBP13.91□□□□□ -0.18
PDLIM5-206ENST00000437932 GIMAP6Q6P9H5 292 aa13.91□□□□□ -0.18
PDLIM5-206ENST00000437932 GAS2L3Q86XJ1 694 aa13.91□□□□□ -0.18
PDLIM5-206ENST00000437932 ATP8B2P98198 1209 aa13.9□□□□□ -0.18
PDLIM5-206ENST00000437932 NFXL1Q6ZNB6 911 aa13.9□□□□□ -0.18
PDLIM5-206ENST00000437932 RBSNQ9H1K0 784 aa13.9□□□□□ -0.18
PDLIM5-206ENST00000437932 EDC4Q6P2E9 1401 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-206ENST00000437932 ABCC4O15439 1325 aa13.9□□□□□ -0.18
PDLIM5-206ENST00000437932 CPLX1O14810 134 aa13.9□□□□□ -0.18
PDLIM5-206ENST00000437932 TNMDQ9H2S6 317 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms