RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 DCAF5Q96JK2 942 aa19.75■□□□□ 0.75
TNFRSF1A-203ENST00000437813 SSFA2P28290 1259 aa19.74■□□□□ 0.75
TNFRSF1A-203ENST00000437813 KNSTRNQ9Y448 316 aa19.74■□□□□ 0.75
TNFRSF1A-203ENST00000437813 CICQ96RK0 1608 aaPredicted RBP19.73■□□□□ 0.75
TNFRSF1A-203ENST00000437813 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.73■□□□□ 0.75
TNFRSF1A-203ENST00000437813 MSH5O43196 834 aa19.73■□□□□ 0.75
TNFRSF1A-203ENST00000437813 AK7Q96M32 723 aa19.73■□□□□ 0.75
TNFRSF1A-203ENST00000437813 MYH14Q7Z406 1995 aaKnown RBP19.72■□□□□ 0.75
TNFRSF1A-203ENST00000437813 YBX3P16989 372 aaKnown RBP eCLIP19.72■□□□□ 0.75
TNFRSF1A-203ENST00000437813 AMOTQ4VCS5 1084 aa19.72■□□□□ 0.75
TNFRSF1A-203ENST00000437813 PLEKHO1Q53GL0 409 aaPredicted RBP19.72■□□□□ 0.75
TNFRSF1A-203ENST00000437813 SCN11AQ9UI33 1791 aa19.72■□□□□ 0.75
TNFRSF1A-203ENST00000437813 GPR162Q16538 588 aa19.71■□□□□ 0.75
TNFRSF1A-203ENST00000437813 ZNF530Q6P9A1 599 aaPredicted RBP19.71■□□□□ 0.75
TNFRSF1A-203ENST00000437813 KLHL34Q8N239 644 aa19.71■□□□□ 0.75
TNFRSF1A-203ENST00000437813 CD2APQ9Y5K6 639 aa19.71■□□□□ 0.75
TNFRSF1A-203ENST00000437813 HSP90AB1P08238 724 aaKnown RBP19.7■□□□□ 0.74
TNFRSF1A-203ENST00000437813 ATP6V1AP38606 617 aa19.7■□□□□ 0.74
TNFRSF1A-203ENST00000437813 ADAMTS7Q9UKP4 1686 aa19.69■□□□□ 0.74
TNFRSF1A-203ENST00000437813 SULT6B1Q6IMI4 303 aa19.69■□□□□ 0.74
TNFRSF1A-203ENST00000437813 KIF13BQ9NQT8 1826 aa19.68■□□□□ 0.74
TNFRSF1A-203ENST00000437813 PHF14O94880 888 aa19.68■□□□□ 0.74
TNFRSF1A-203ENST00000437813 NPC1L1Q9UHC9 1359 aa19.68■□□□□ 0.74
TNFRSF1A-203ENST00000437813 TJP1Q07157 1748 aa19.68■□□□□ 0.74
TNFRSF1A-203ENST00000437813 KIAA1551Q9HCM1 1747 aa19.68■□□□□ 0.74
TNFRSF1A-203ENST00000437813 GNPATO15228 680 aa19.67■□□□□ 0.74
TNFRSF1A-203ENST00000437813 COL3A1P02461 1466 aaPredicted RBP19.67■□□□□ 0.74
TNFRSF1A-203ENST00000437813 MRC1P22897 1456 aa19.67■□□□□ 0.74
TNFRSF1A-203ENST00000437813 C4AP0C0L4 1744 aa19.66■□□□□ 0.74
TNFRSF1A-203ENST00000437813 MTHFSP49914 203 aa19.66■□□□□ 0.74
TNFRSF1A-203ENST00000437813 RC3H1Q5TC82 1133 aaKnown RBP19.66■□□□□ 0.74
TNFRSF1A-203ENST00000437813 VIRMAQ69YN4 1812 aaKnown RBP19.66■□□□□ 0.74
TNFRSF1A-203ENST00000437813 CNTNAP4Q9C0A0 1308 aa19.66■□□□□ 0.74
TNFRSF1A-203ENST00000437813 CABP4P57796 275 aa19.63■□□□□ 0.73
TNFRSF1A-203ENST00000437813 NFATC2IPQ8NCF5 419 aa19.63■□□□□ 0.73
TNFRSF1A-203ENST00000437813 GRIN3BO60391 1043 aa19.62■□□□□ 0.73
TNFRSF1A-203ENST00000437813 C1orf141Q5JVX7 400 aa19.62■□□□□ 0.73
TNFRSF1A-203ENST00000437813 RPS6KA4O75676 772 aa19.61■□□□□ 0.73
TNFRSF1A-203ENST00000437813 ADRA2BP18089 450 aa19.61■□□□□ 0.73
TNFRSF1A-203ENST00000437813 PELP1Q8IZL8 1130 aaKnown RBP19.61■□□□□ 0.73
TNFRSF1A-203ENST00000437813 RBM42Q9BTD8 480 aaKnown RBP19.61■□□□□ 0.73
TNFRSF1A-203ENST00000437813 AKAP4Q5JQC9 854 aa19.6■□□□□ 0.73
TNFRSF1A-203ENST00000437813 ARHGEF1Q92888 912 aaKnown RBP19.6■□□□□ 0.73
TNFRSF1A-203ENST00000437813 RTCBQ9Y3I0 505 aaKnown RBP19.6■□□□□ 0.73
TNFRSF1A-203ENST00000437813 LGR6Q9HBX8 967 aa19.59■□□□□ 0.73
TNFRSF1A-203ENST00000437813 PXDNLA1KZ92 1463 aa19.59■□□□□ 0.73
TNFRSF1A-203ENST00000437813 C10orf71Q711Q0 1435 aa19.59■□□□□ 0.73
TNFRSF1A-203ENST00000437813 ADCY9O60503 1353 aa19.58■□□□□ 0.73
TNFRSF1A-203ENST00000437813 KCPQ6ZWJ8 1503 aa19.58■□□□□ 0.73
TNFRSF1A-203ENST00000437813 PTCD1O75127 700 aaKnown RBP19.58■□□□□ 0.72
TNFRSF1A-203ENST00000437813 MMP10P09238 476 aa19.58■□□□□ 0.72
TNFRSF1A-203ENST00000437813 GYS1P13807 737 aa19.58■□□□□ 0.72
TNFRSF1A-203ENST00000437813 CC2D1BQ5T0F9 858 aaKnown RBP19.58■□□□□ 0.72
TNFRSF1A-203ENST00000437813 TRAPPC3LQ5T215 181 aa19.58■□□□□ 0.72
TNFRSF1A-203ENST00000437813 UBR2Q8IWV8 1755 aa19.57■□□□□ 0.72
TNFRSF1A-203ENST00000437813 HMOX1P09601 288 aa19.57■□□□□ 0.72
TNFRSF1A-203ENST00000437813 CRKLP46109 303 aaKnown RBP19.57■□□□□ 0.72
TNFRSF1A-203ENST00000437813 SLC52A2Q9HAB3 445 aa19.57■□□□□ 0.72
TNFRSF1A-203ENST00000437813 BRCA1P38398 1863 aaKnown RBP19.56■□□□□ 0.72
TNFRSF1A-203ENST00000437813 RNMTO43148 476 aaKnown RBP19.56■□□□□ 0.72
TNFRSF1A-203ENST00000437813 DIAPH1O60610 1272 aaKnown RBP19.56■□□□□ 0.72
TNFRSF1A-203ENST00000437813 MTHFSDQ2M296 383 aaKnown RBP19.56■□□□□ 0.72
TNFRSF1A-203ENST00000437813 NLGN1Q8N2Q7 840 aa19.56■□□□□ 0.72
TNFRSF1A-203ENST00000437813 N4BP2Q86UW6 1770 aaPredicted RBP19.55■□□□□ 0.72
TNFRSF1A-203ENST00000437813 INTS5Q6P9B9 1019 aaKnown RBP19.55■□□□□ 0.72
TNFRSF1A-203ENST00000437813 SIPA1L3O60292 1781 aaPredicted RBP19.54■□□□□ 0.72
TNFRSF1A-203ENST00000437813 C1QTNF8P60827 252 aa19.52■□□□□ 0.72
TNFRSF1A-203ENST00000437813 USP42Q9H9J4 1324 aaKnown RBP19.51■□□□□ 0.71
TNFRSF1A-203ENST00000437813 ATP10DQ9P241 1426 aa19.51■□□□□ 0.71
TNFRSF1A-203ENST00000437813 CYP19A1P11511 503 aaPredicted RBP19.5■□□□□ 0.71
TNFRSF1A-203ENST00000437813 RFC4P35249 363 aa19.5■□□□□ 0.71
TNFRSF1A-203ENST00000437813 SLC39A6Q13433 755 aa19.5■□□□□ 0.71
TNFRSF1A-203ENST00000437813 DNAJC10Q8IXB1 793 aa19.5■□□□□ 0.71
TNFRSF1A-203ENST00000437813 SRP68Q9UHB9 627 aaKnown RBP19.5■□□□□ 0.71
TNFRSF1A-203ENST00000437813 SOS1Q07889 1333 aaPredicted RBP19.5■□□□□ 0.71
TNFRSF1A-203ENST00000437813 TGFB2P61812 414 aa19.49■□□□□ 0.71
TNFRSF1A-203ENST00000437813 KCNA3P22001 575 aa19.48■□□□□ 0.71
TNFRSF1A-203ENST00000437813 DDR1Q08345 913 aa19.48■□□□□ 0.71
TNFRSF1A-203ENST00000437813 FKBP8Q14318 412 aa19.48■□□□□ 0.71
TNFRSF1A-203ENST00000437813 CCDC87Q9NVE4 849 aa19.48■□□□□ 0.71
TNFRSF1A-203ENST00000437813 WWC3Q9ULE0 1092 aa19.48■□□□□ 0.71
TNFRSF1A-203ENST00000437813 IL17REQ8NFR9 667 aa19.47■□□□□ 0.71
TNFRSF1A-203ENST00000437813 NRXN2Q9P2S2 1712 aa19.47■□□□□ 0.71
TNFRSF1A-203ENST00000437813 ARFGEF1Q9Y6D6 1849 aa19.46■□□□□ 0.71
TNFRSF1A-203ENST00000437813 CEMIPQ8WUJ3 1361 aa19.46■□□□□ 0.71
TNFRSF1A-203ENST00000437813 A0A0G2JLW4 131 aa19.46■□□□□ 0.71
TNFRSF1A-203ENST00000437813 TM4SF1P30408 202 aa19.46■□□□□ 0.71
TNFRSF1A-203ENST00000437813 VSIG10Q8N0Z9 540 aa19.46■□□□□ 0.71
TNFRSF1A-203ENST00000437813 GIGYF1O75420 1035 aaPredicted RBP19.45■□□□□ 0.7
TNFRSF1A-203ENST00000437813 DPEP1P16444 411 aa19.45■□□□□ 0.7
TNFRSF1A-203ENST00000437813 AFDNP55196 1824 aaKnown RBP19.44■□□□□ 0.7
TNFRSF1A-203ENST00000437813 CEP350Q5VT06 3117 aa19.44■□□□□ 0.7
TNFRSF1A-203ENST00000437813 POLRMTO00411 1230 aaKnown RBP19.44■□□□□ 0.7
TNFRSF1A-203ENST00000437813 RSPH6AQ9H0K4 717 aa19.44■□□□□ 0.7
TNFRSF1A-203ENST00000437813 ZBTB1Q9Y2K1 713 aa19.44■□□□□ 0.7
TNFRSF1A-203ENST00000437813 PARP3Q9Y6F1 533 aa19.44■□□□□ 0.7
TNFRSF1A-203ENST00000437813 PHACTR3Q96KR7 559 aa19.43■□□□□ 0.7
TNFRSF1A-203ENST00000437813 BCL2L12Q9HB09 334 aa19.43■□□□□ 0.7
TNFRSF1A-203ENST00000437813 COL15A1P39059 1388 aa19.43■□□□□ 0.7
TNFRSF1A-203ENST00000437813 U2SURPO15042 1029 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms