RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 DNAJC5GQ8N7S2 189 aa19.62■□□□□ 0.73
LINC01088-201ENST00000437737 NMRK2Q9NPI5 230 aa19.62■□□□□ 0.73
LINC01088-201ENST00000437737 ASAP1Q9ULH1 1129 aa19.62■□□□□ 0.73
LINC01088-201ENST00000437737 A0A0G2JLW4 131 aa19.61■□□□□ 0.73
LINC01088-201ENST00000437737 PPM1GO15355 546 aaPredicted RBP19.61■□□□□ 0.73
LINC01088-201ENST00000437737 TMF1P82094 1093 aa19.61■□□□□ 0.73
LINC01088-201ENST00000437737 EMILIN1Q9Y6C2 1016 aa19.61■□□□□ 0.73
LINC01088-201ENST00000437737 C10orf71Q711Q0 1435 aa19.6■□□□□ 0.73
LINC01088-201ENST00000437737 TRAPPC3LQ5T215 181 aa19.6■□□□□ 0.73
LINC01088-201ENST00000437737 C16orf71Q8IYS4 520 aaPredicted RBP19.6■□□□□ 0.73
LINC01088-201ENST00000437737 BRCA1P38398 1863 aaKnown RBP19.6■□□□□ 0.73
LINC01088-201ENST00000437737 NCAPD2Q15021 1401 aa19.59■□□□□ 0.73
LINC01088-201ENST00000437737 FCHSD2O94868 740 aa19.59■□□□□ 0.73
LINC01088-201ENST00000437737 NLGN1Q8N2Q7 840 aa19.59■□□□□ 0.73
LINC01088-201ENST00000437737 RTCBQ9Y3I0 505 aaKnown RBP19.59■□□□□ 0.73
LINC01088-201ENST00000437737 C4AP0C0L4 1744 aa19.59■□□□□ 0.73
LINC01088-201ENST00000437737 IFNL2Q8IZJ0 200 aa19.58■□□□□ 0.72
LINC01088-201ENST00000437737 CCDC87Q9NVE4 849 aa19.58■□□□□ 0.72
LINC01088-201ENST00000437737 ANKRD26Q9UPS8 1709 aa19.57■□□□□ 0.72
LINC01088-201ENST00000437737 DPEP1P16444 411 aa19.57■□□□□ 0.72
LINC01088-201ENST00000437737 RBM46Q8TBY0 533 aaKnown RBP19.57■□□□□ 0.72
LINC01088-201ENST00000437737 ATG3Q9NT62 314 aa19.57■□□□□ 0.72
LINC01088-201ENST00000437737 ARFGEF1Q9Y6D6 1849 aa19.57■□□□□ 0.72
LINC01088-201ENST00000437737 PHKG2P15735 406 aa19.56■□□□□ 0.72
LINC01088-201ENST00000437737 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.56■□□□□ 0.72
LINC01088-201ENST00000437737 PLEKHG2Q9H7P9 1386 aa19.56■□□□□ 0.72
LINC01088-201ENST00000437737 COL5A3P25940 1745 aaPredicted RBP19.55■□□□□ 0.72
LINC01088-201ENST00000437737 C9orf131Q5VYM1 1079 aa19.55■□□□□ 0.72
LINC01088-201ENST00000437737 PARP3Q9Y6F1 533 aa19.55■□□□□ 0.72
LINC01088-201ENST00000437737 HTRA3P83110 453 aa19.54■□□□□ 0.72
LINC01088-201ENST00000437737 EYA1Q99502 592 aa19.54■□□□□ 0.72
LINC01088-201ENST00000437737 RBM42Q9BTD8 480 aaKnown RBP19.54■□□□□ 0.72
LINC01088-201ENST00000437737 KDRP35968 1356 aa19.54■□□□□ 0.72
LINC01088-201ENST00000437737 ZNF831Q5JPB2 1677 aa19.53■□□□□ 0.72
LINC01088-201ENST00000437737 ADRA2BP18089 450 aa19.53■□□□□ 0.72
LINC01088-201ENST00000437737 RFC4P35249 363 aa19.53■□□□□ 0.72
LINC01088-201ENST00000437737 CDCA8Q53HL2 280 aa19.53■□□□□ 0.72
LINC01088-201ENST00000437737 ARHGEF1Q92888 912 aaKnown RBP19.53■□□□□ 0.72
LINC01088-201ENST00000437737 KLRG1Q96E93 195 aa19.53■□□□□ 0.72
LINC01088-201ENST00000437737 WASHC2AQ641Q2 1341 aa19.52■□□□□ 0.72
LINC01088-201ENST00000437737 GYS1P13807 737 aa19.52■□□□□ 0.72
LINC01088-201ENST00000437737 KDM2BQ8NHM5 1336 aa19.51■□□□□ 0.71
LINC01088-201ENST00000437737 KCPQ6ZWJ8 1503 aa19.51■□□□□ 0.71
LINC01088-201ENST00000437737 CAPN15O75808 1086 aa19.51■□□□□ 0.71
LINC01088-201ENST00000437737 FSTL1Q12841 308 aa19.51■□□□□ 0.71
LINC01088-201ENST00000437737 COL13A1Q5TAT6 717 aaPredicted RBP19.51■□□□□ 0.71
LINC01088-201ENST00000437737 TNRC6CQ9HCJ0 1690 aaKnown RBP19.5■□□□□ 0.71
LINC01088-201ENST00000437737 SLC4A9Q96Q91 983 aa19.5■□□□□ 0.71
LINC01088-201ENST00000437737 CARD14Q9BXL6 1004 aa19.5■□□□□ 0.71
LINC01088-201ENST00000437737 PIM2Q9P1W9 311 aa19.5■□□□□ 0.71
LINC01088-201ENST00000437737 CNTNAP4Q9C0A0 1308 aa19.5■□□□□ 0.71
LINC01088-201ENST00000437737 RPS6KA4O75676 772 aa19.49■□□□□ 0.71
LINC01088-201ENST00000437737 RC3H1Q5TC82 1133 aaKnown RBP19.49■□□□□ 0.71
LINC01088-201ENST00000437737 JMYQ8N9B5 988 aa19.49■□□□□ 0.71
LINC01088-201ENST00000437737 RNF181Q9P0P0 153 aa19.49■□□□□ 0.71
LINC01088-201ENST00000437737 MYH14Q7Z406 1995 aaKnown RBP19.48■□□□□ 0.71
LINC01088-201ENST00000437737 KCNA3P22001 575 aa19.48■□□□□ 0.71
LINC01088-201ENST00000437737 DALRD3Q5D0E6 543 aaKnown RBP19.47■□□□□ 0.71
LINC01088-201ENST00000437737 RRAGCQ9HB90 399 aa19.47■□□□□ 0.71
LINC01088-201ENST00000437737 SBF1O95248 1867 aa19.47■□□□□ 0.71
LINC01088-201ENST00000437737 ERVV-2B6SEH9 535 aa19.46■□□□□ 0.71
LINC01088-201ENST00000437737 TNS4Q8IZW8 715 aa19.46■□□□□ 0.71
LINC01088-201ENST00000437737 DCAF5Q96JK2 942 aa19.46■□□□□ 0.71
LINC01088-201ENST00000437737 HSP90AB1P08238 724 aaKnown RBP19.45■□□□□ 0.7
LINC01088-201ENST00000437737 EIF4A2Q14240 407 aaKnown RBP19.44■□□□□ 0.7
LINC01088-201ENST00000437737 CCER1Q8TC90 406 aaPredicted RBP19.44■□□□□ 0.7
LINC01088-201ENST00000437737 POLKQ9UBT6 870 aa19.44■□□□□ 0.7
LINC01088-201ENST00000437737 CABP4P57796 275 aa19.43■□□□□ 0.7
LINC01088-201ENST00000437737 SMC1BQ8NDV3 1235 aa19.43■□□□□ 0.7
LINC01088-201ENST00000437737 SRP68Q9UHB9 627 aaKnown RBP19.43■□□□□ 0.7
LINC01088-201ENST00000437737 CHRNA5P30532 468 aa19.42■□□□□ 0.7
LINC01088-201ENST00000437737 PTCD1O75127 700 aaKnown RBP19.41■□□□□ 0.7
LINC01088-201ENST00000437737 TNNT2P45379 298 aaPredicted RBP19.41■□□□□ 0.7
LINC01088-201ENST00000437737 DDR1Q08345 913 aa19.41■□□□□ 0.7
LINC01088-201ENST00000437737 FKBP8Q14318 412 aa19.41■□□□□ 0.7
LINC01088-201ENST00000437737 PLEKHO1Q53GL0 409 aaPredicted RBP19.41■□□□□ 0.7
LINC01088-201ENST00000437737 USP42Q9H9J4 1324 aaKnown RBP19.41■□□□□ 0.7
LINC01088-201ENST00000437737 KDM6AO15550 1401 aaPredicted RBP19.41■□□□□ 0.7
LINC01088-201ENST00000437737 CRKLP46109 303 aaKnown RBP19.4■□□□□ 0.7
LINC01088-201ENST00000437737 ZNF530Q6P9A1 599 aaPredicted RBP19.4■□□□□ 0.7
LINC01088-201ENST00000437737 TJP1Q07157 1748 aa19.39■□□□□ 0.7
LINC01088-201ENST00000437737 PRELPP51888 382 aa19.39■□□□□ 0.69
LINC01088-201ENST00000437737 CLSPNQ9HAW4 1339 aa19.38■□□□□ 0.69
LINC01088-201ENST00000437737 MTHFSP49914 203 aa19.37■□□□□ 0.69
LINC01088-201ENST00000437737 RASSF7Q02833 373 aa19.37■□□□□ 0.69
LINC01088-201ENST00000437737 ZC3H4Q9UPT8 1303 aaKnown RBP19.36■□□□□ 0.69
LINC01088-201ENST00000437737 POLRMTO00411 1230 aaKnown RBP19.36■□□□□ 0.69
LINC01088-201ENST00000437737 AMOTQ4VCS5 1084 aa19.36■□□□□ 0.69
LINC01088-201ENST00000437737 C1orf141Q5JVX7 400 aa19.36■□□□□ 0.69
LINC01088-201ENST00000437737 TIAM2Q8IVF5 1701 aa19.36■□□□□ 0.69
LINC01088-201ENST00000437737 CCDC88AQ3V6T2 1871 aa19.35■□□□□ 0.69
LINC01088-201ENST00000437737 AFDNP55196 1824 aaKnown RBP19.35■□□□□ 0.69
LINC01088-201ENST00000437737 HSPA1AP0DMV8 641 aaKnown RBP19.35■□□□□ 0.69
LINC01088-201ENST00000437737 HSPA1BP0DMV9 641 aaKnown RBP19.35■□□□□ 0.69
LINC01088-201ENST00000437737 ADAMTS7Q9UKP4 1686 aa19.34■□□□□ 0.69
LINC01088-201ENST00000437737 ZPR1O75312 459 aa19.34■□□□□ 0.69
LINC01088-201ENST00000437737 NFATC2IPQ8NCF5 419 aa19.34■□□□□ 0.69
LINC01088-201ENST00000437737 POLR3GLQ9BT43 218 aa19.34■□□□□ 0.69
LINC01088-201ENST00000437737 VEGFAP15692 232 aaPredicted RBP19.33■□□□□ 0.68
LINC01088-201ENST00000437737 TM4SF1P30408 202 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms