RNA–Protein interactions for RNA: ENST00000437072.5

H2AFV-206, Transcript of H2A histone family member V, humanhuman

TSL 4 BASIC

Gene H2AFV, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-206ENST00000437072 RAPGEF4Q8WZA2 1011 aa20.49■□□□□ 0.87
H2AFV-206ENST00000437072 CGNL1Q0VF96 1302 aa20.49■□□□□ 0.87
H2AFV-206ENST00000437072 PCDH11XQ9BZA7 1347 aa20.49■□□□□ 0.87
H2AFV-206ENST00000437072 PCDH11YQ9BZA8 1340 aa20.49■□□□□ 0.87
H2AFV-206ENST00000437072 SBF1O95248 1867 aa20.48■□□□□ 0.87
H2AFV-206ENST00000437072 CCDC87Q9NVE4 849 aa20.48■□□□□ 0.87
H2AFV-206ENST00000437072 MKRN1Q9UHC7 482 aaKnown RBP20.48■□□□□ 0.87
H2AFV-206ENST00000437072 A0A1W2PP64 1363 aa20.47■□□□□ 0.87
H2AFV-206ENST00000437072 TATP17735 454 aaPredicted RBP20.47■□□□□ 0.87
H2AFV-206ENST00000437072 TMF1P82094 1093 aa20.47■□□□□ 0.87
H2AFV-206ENST00000437072 HDGFL2Q7Z4V5 671 aaPredicted RBP20.47■□□□□ 0.87
H2AFV-206ENST00000437072 PIM2Q9P1W9 311 aa20.47■□□□□ 0.87
H2AFV-206ENST00000437072 DALRD3Q5D0E6 543 aaKnown RBP20.46■□□□□ 0.87
H2AFV-206ENST00000437072 ASAP1Q9ULH1 1129 aa20.46■□□□□ 0.87
H2AFV-206ENST00000437072 C4AP0C0L4 1744 aa20.45■□□□□ 0.86
H2AFV-206ENST00000437072 RASSF7Q02833 373 aa20.45■□□□□ 0.86
H2AFV-206ENST00000437072 NLGN1Q8N2Q7 840 aa20.45■□□□□ 0.86
H2AFV-206ENST00000437072 PRDM10Q9NQV6 1147 aa20.45■□□□□ 0.86
H2AFV-206ENST00000437072 GYS1P13807 737 aa20.44■□□□□ 0.86
H2AFV-206ENST00000437072 VEGFAP15692 232 aaPredicted RBP20.44■□□□□ 0.86
H2AFV-206ENST00000437072 ATP6V1AP38606 617 aa20.44■□□□□ 0.86
H2AFV-206ENST00000437072 RRS1Q15050 365 aaKnown RBP20.44■□□□□ 0.86
H2AFV-206ENST00000437072 CHRNA5P30532 468 aa20.43■□□□□ 0.86
H2AFV-206ENST00000437072 TRAPPC3LQ5T215 181 aa20.43■□□□□ 0.86
H2AFV-206ENST00000437072 ARHGEF1Q92888 912 aaKnown RBP20.43■□□□□ 0.86
H2AFV-206ENST00000437072 POTECB2RU33 542 aa20.42■□□□□ 0.86
H2AFV-206ENST00000437072 L3MBTL2Q969R5 705 aa20.42■□□□□ 0.86
H2AFV-206ENST00000437072 GLTPD2A6NH11 291 aa20.41■□□□□ 0.86
H2AFV-206ENST00000437072 PARP3Q9Y6F1 533 aa20.41■□□□□ 0.86
H2AFV-206ENST00000437072 ROCK2O75116 1388 aaKnown RBP20.4■□□□□ 0.86
H2AFV-206ENST00000437072 ABHD8Q96I13 439 aa20.4■□□□□ 0.86
H2AFV-206ENST00000437072 COG3Q96JB2 828 aa20.4■□□□□ 0.86
H2AFV-206ENST00000437072 SLC4A9Q96Q91 983 aa20.4■□□□□ 0.86
H2AFV-206ENST00000437072 KDM6AO15550 1401 aaPredicted RBP20.39■□□□□ 0.85
H2AFV-206ENST00000437072 RTCBQ9Y3I0 505 aaKnown RBP20.39■□□□□ 0.85
H2AFV-206ENST00000437072 NKX1-1Q15270 411 aaPredicted RBP20.38■□□□□ 0.85
H2AFV-206ENST00000437072 CREBZFQ9NS37 354 aa20.38■□□□□ 0.85
H2AFV-206ENST00000437072 ATG3Q9NT62 314 aa20.38■□□□□ 0.85
H2AFV-206ENST00000437072 TERF2IPQ9NYB0 399 aa20.38■□□□□ 0.85
H2AFV-206ENST00000437072 HSP90AB2PQ58FF8 381 aa20.37■□□□□ 0.85
H2AFV-206ENST00000437072 RTL1A6NKG5 1358 aa20.36■□□□□ 0.85
H2AFV-206ENST00000437072 CTCFP49711 727 aaPredicted RBP20.36■□□□□ 0.85
H2AFV-206ENST00000437072 LBX1P52954 281 aa20.36■□□□□ 0.85
H2AFV-206ENST00000437072 DDR1Q08345 913 aa20.36■□□□□ 0.85
H2AFV-206ENST00000437072 TMOD3Q9NYL9 352 aa20.35■□□□□ 0.85
H2AFV-206ENST00000437072 ZC3H4Q9UPT8 1303 aaKnown RBP20.34■□□□□ 0.85
H2AFV-206ENST00000437072 POTEIP0CG38 1075 aa20.34■□□□□ 0.85
H2AFV-206ENST00000437072 POTEJP0CG39 1038 aa20.34■□□□□ 0.85
H2AFV-206ENST00000437072 RFC4P35249 363 aa20.34■□□□□ 0.85
H2AFV-206ENST00000437072 KDRP35968 1356 aa20.34■□□□□ 0.85
H2AFV-206ENST00000437072 CNTNAP1P78357 1384 aa20.34■□□□□ 0.85
H2AFV-206ENST00000437072 LMNB1P20700 586 aa20.33■□□□□ 0.85
H2AFV-206ENST00000437072 SRP68Q9UHB9 627 aaKnown RBP20.33■□□□□ 0.85
H2AFV-206ENST00000437072 MLLT1Q03111 559 aaPredicted RBP20.32■□□□□ 0.84
H2AFV-206ENST00000437072 FKBP8Q14318 412 aa20.32■□□□□ 0.84
H2AFV-206ENST00000437072 SMG6Q86US8 1419 aaKnown RBP20.32■□□□□ 0.84
H2AFV-206ENST00000437072 ADRA2BP18089 450 aa20.31■□□□□ 0.84
H2AFV-206ENST00000437072 VEGFBP49765 207 aa20.31■□□□□ 0.84
H2AFV-206ENST00000437072 RPS6KA4O75676 772 aa20.3■□□□□ 0.84
H2AFV-206ENST00000437072 AIDAQ96BJ3 306 aa20.3■□□□□ 0.84
H2AFV-206ENST00000437072 WBP1LQ9NX94 342 aa20.3■□□□□ 0.84
H2AFV-206ENST00000437072 MYH14Q7Z406 1995 aaKnown RBP20.29■□□□□ 0.84
H2AFV-206ENST00000437072 RC3H1Q5TC82 1133 aaKnown RBP20.29■□□□□ 0.84
H2AFV-206ENST00000437072 INSRP06213 1382 aa20.29■□□□□ 0.84
H2AFV-206ENST00000437072 HSPA8P11142 646 aaKnown RBP20.28■□□□□ 0.84
H2AFV-206ENST00000437072 RGS19P49795 217 aa20.28■□□□□ 0.84
H2AFV-206ENST00000437072 CHADLQ6NUI6 762 aa20.28■□□□□ 0.84
H2AFV-206ENST00000437072 TIAM2Q8IVF5 1701 aa20.27■□□□□ 0.84
H2AFV-206ENST00000437072 CCDC85CA6NKD9 419 aa20.27■□□□□ 0.84
H2AFV-206ENST00000437072 RBM42Q9BTD8 480 aaKnown RBP20.27■□□□□ 0.84
H2AFV-206ENST00000437072 GGNBP2Q9H3C7 697 aa20.27■□□□□ 0.84
H2AFV-206ENST00000437072 CNTNAP4Q9C0A0 1308 aa20.27■□□□□ 0.83
H2AFV-206ENST00000437072 NFKBIEO00221 500 aa20.26■□□□□ 0.83
H2AFV-206ENST00000437072 POLRMTO00411 1230 aaKnown RBP20.26■□□□□ 0.83
H2AFV-206ENST00000437072 CCDC88AQ3V6T2 1871 aa20.26■□□□□ 0.83
H2AFV-206ENST00000437072 COL5A3P25940 1745 aaPredicted RBP20.25■□□□□ 0.83
H2AFV-206ENST00000437072 FYB1O15117 783 aa20.24■□□□□ 0.83
H2AFV-206ENST00000437072 PHKG2P15735 406 aa20.24■□□□□ 0.83
H2AFV-206ENST00000437072 SPG7Q9UQ90 795 aa20.24■□□□□ 0.83
H2AFV-206ENST00000437072 PASKQ96RG2 1323 aa20.24■□□□□ 0.83
H2AFV-206ENST00000437072 USP42Q9H9J4 1324 aaKnown RBP20.24■□□□□ 0.83
H2AFV-206ENST00000437072 TNRC18O15417 2968 aaPredicted RBP20.23■□□□□ 0.83
H2AFV-206ENST00000437072 NCAPD2Q15021 1401 aa20.22■□□□□ 0.83
H2AFV-206ENST00000437072 TM4SF1P30408 202 aa20.22■□□□□ 0.83
H2AFV-206ENST00000437072 VIRMAQ69YN4 1812 aaKnown RBP20.22■□□□□ 0.83
H2AFV-206ENST00000437072 FLT4P35916 1363 aa20.21■□□□□ 0.83
H2AFV-206ENST00000437072 SIN3AQ96ST3 1273 aa20.21■□□□□ 0.83
H2AFV-206ENST00000437072 DPY19L2Q6NUT2 758 aa20.2■□□□□ 0.82
H2AFV-206ENST00000437072 IFNL2Q8IZJ0 200 aa20.19■□□□□ 0.82
H2AFV-206ENST00000437072 PUS7Q96PZ0 661 aaKnown RBP20.19■□□□□ 0.82
H2AFV-206ENST00000437072 EMILIN1Q9Y6C2 1016 aa20.19■□□□□ 0.82
H2AFV-206ENST00000437072 ZNF831Q5JPB2 1677 aa20.19■□□□□ 0.82
H2AFV-206ENST00000437072 DDNO94850 711 aaPredicted RBP20.18■□□□□ 0.82
H2AFV-206ENST00000437072 CRKLP46109 303 aaKnown RBP20.18■□□□□ 0.82
H2AFV-206ENST00000437072 TTLL6Q8N841 843 aa20.17■□□□□ 0.82
H2AFV-206ENST00000437072 CARD11Q9BXL7 1154 aa20.17■□□□□ 0.82
H2AFV-206ENST00000437072 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.17■□□□□ 0.822e-6■□□□□ 8.4
H2AFV-206ENST00000437072 TMEM88BA6NKF7 163 aa20.16■□□□□ 0.82
H2AFV-206ENST00000437072 ITGBL1O95965 494 aaPredicted RBP20.16■□□□□ 0.82
H2AFV-206ENST00000437072 EYA1Q99502 592 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms