RNA–Protein interactions for RNA: ENST00000436754.5

PDLIM2-211, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-211ENST00000436754 LINC00116Q8NCU8 138 aa14.93□□□□□ -0.02
PDLIM2-211ENST00000436754 ATG3Q9NT62 314 aa14.93□□□□□ -0.02
PDLIM2-211ENST00000436754 PER1O15534 1290 aaPredicted RBP14.92□□□□□ -0.02
PDLIM2-211ENST00000436754 HSP90AB1P08238 724 aaKnown RBP14.92□□□□□ -0.02
PDLIM2-211ENST00000436754 ATP6V1AP38606 617 aa14.92□□□□□ -0.02
PDLIM2-211ENST00000436754 UBR3Q6ZT12 1888 aa14.92□□□□□ -0.02
PDLIM2-211ENST00000436754 ITPK1Q13572 414 aa14.91□□□□□ -0.02
PDLIM2-211ENST00000436754 AMOTQ4VCS5 1084 aa14.91□□□□□ -0.02
PDLIM2-211ENST00000436754 PLEKHO1Q53GL0 409 aaPredicted RBP14.91□□□□□ -0.02
PDLIM2-211ENST00000436754 DCAF5Q96JK2 942 aa14.91□□□□□ -0.02
PDLIM2-211ENST00000436754 PHF14O94880 888 aa14.9□□□□□ -0.02
PDLIM2-211ENST00000436754 RC3H1Q5TC82 1133 aaKnown RBP14.89□□□□□ -0.03
PDLIM2-211ENST00000436754 ZNF831Q5JPB2 1677 aa14.89□□□□□ -0.03
PDLIM2-211ENST00000436754 NPC1L1Q9UHC9 1359 aa14.88□□□□□ -0.03
PDLIM2-211ENST00000436754 GNPATO15228 680 aa14.88□□□□□ -0.03
PDLIM2-211ENST00000436754 GIGYF1O75420 1035 aaPredicted RBP14.88□□□□□ -0.03
PDLIM2-211ENST00000436754 SMIM5Q71RC9 77 aa14.88□□□□□ -0.03
PDLIM2-211ENST00000436754 KDRP35968 1356 aa14.87□□□□□ -0.03
PDLIM2-211ENST00000436754 MTHFSP49914 203 aa14.87□□□□□ -0.03
PDLIM2-211ENST00000436754 TRAPPC3LQ5T215 181 aa14.87□□□□□ -0.03
PDLIM2-211ENST00000436754 GOLGB1Q14789 3259 aaKnown RBP14.86□□□□□ -0.03
PDLIM2-211ENST00000436754 ADRA2BP18089 450 aa14.86□□□□□ -0.03
PDLIM2-211ENST00000436754 NLGN1Q8N2Q7 840 aa14.86□□□□□ -0.03
PDLIM2-211ENST00000436754 SLC4A9Q96Q91 983 aa14.86□□□□□ -0.03
PDLIM2-211ENST00000436754 RTCBQ9Y3I0 505 aaKnown RBP14.86□□□□□ -0.03
PDLIM2-211ENST00000436754 SENP3-EIF4A1A0A087X0R7 540 aa14.85□□□□□ -0.03
PDLIM2-211ENST00000436754 RPS6KA4O75676 772 aa14.84□□□□□ -0.03
PDLIM2-211ENST00000436754 IL13P35225 146 aa14.84□□□□□ -0.03
PDLIM2-211ENST00000436754 CABP4P57796 275 aa14.84□□□□□ -0.03
PDLIM2-211ENST00000436754 TGFB2P61812 414 aa14.84□□□□□ -0.03
PDLIM2-211ENST00000436754 ZNF530Q6P9A1 599 aaPredicted RBP14.84□□□□□ -0.03
PDLIM2-211ENST00000436754 AEBP1Q8IUX7 1158 aa14.84□□□□□ -0.03
PDLIM2-211ENST00000436754 RBM42Q9BTD8 480 aaKnown RBP14.84□□□□□ -0.03
PDLIM2-211ENST00000436754 CNTNAP4Q9C0A0 1308 aa14.84□□□□□ -0.03
PDLIM2-211ENST00000436754 KDM6AO15550 1401 aaPredicted RBP14.83□□□□□ -0.03
PDLIM2-211ENST00000436754 MMP10P09238 476 aa14.83□□□□□ -0.04
PDLIM2-211ENST00000436754 C1orf141Q5JVX7 400 aa14.83□□□□□ -0.04
PDLIM2-211ENST00000436754 SULT6B1Q6IMI4 303 aa14.83□□□□□ -0.04
PDLIM2-211ENST00000436754 ARHGEF1Q92888 912 aaKnown RBP14.83□□□□□ -0.04
PDLIM2-211ENST00000436754 ADCY9O60503 1353 aa14.83□□□□□ -0.04
PDLIM2-211ENST00000436754 DIAPH1O60610 1272 aaKnown RBP14.81□□□□□ -0.04
PDLIM2-211ENST00000436754 NFATC2IPQ8NCF5 419 aa14.81□□□□□ -0.04
PDLIM2-211ENST00000436754 ATP10DQ9P241 1426 aa14.81□□□□□ -0.04
PDLIM2-211ENST00000436754 GYS1P13807 737 aa14.8□□□□□ -0.04
PDLIM2-211ENST00000436754 RFC4P35249 363 aa14.8□□□□□ -0.04
PDLIM2-211ENST00000436754 GPBP1L1Q9HC44 474 aaPredicted RBP14.8□□□□□ -0.04
PDLIM2-211ENST00000436754 COL5A3P25940 1745 aaPredicted RBP14.8□□□□□ -0.04
PDLIM2-211ENST00000436754 KIF13BQ9NQT8 1826 aa14.8□□□□□ -0.04
PDLIM2-211ENST00000436754 AKAP4Q5JQC9 854 aa14.79□□□□□ -0.04
PDLIM2-211ENST00000436754 COL3A1P02461 1466 aaPredicted RBP14.78□□□□□ -0.04
PDLIM2-211ENST00000436754 HMOX1P09601 288 aa14.78□□□□□ -0.04
PDLIM2-211ENST00000436754 CCDC87Q9NVE4 849 aa14.78□□□□□ -0.04
PDLIM2-211ENST00000436754 PXDNLA1KZ92 1463 aa14.77□□□□□ -0.04
PDLIM2-211ENST00000436754 PTCD1O75127 700 aaKnown RBP14.77□□□□□ -0.05
PDLIM2-211ENST00000436754 CFAP53Q96M91 514 aa14.77□□□□□ -0.05
PDLIM2-211ENST00000436754 PARP3Q9Y6F1 533 aa14.77□□□□□ -0.05
PDLIM2-211ENST00000436754 C10orf71Q711Q0 1435 aa14.76□□□□□ -0.05
PDLIM2-211ENST00000436754 A0A0G2JLW4 131 aa14.76□□□□□ -0.05
PDLIM2-211ENST00000436754 U2SURPO15042 1029 aaKnown RBP14.76□□□□□ -0.05
PDLIM2-211ENST00000436754 CRKLP46109 303 aaKnown RBP14.76□□□□□ -0.05
PDLIM2-211ENST00000436754 CICQ96RK0 1608 aaPredicted RBP14.76□□□□□ -0.05
PDLIM2-211ENST00000436754 MYH14Q7Z406 1995 aaKnown RBP14.76□□□□□ -0.05
PDLIM2-211ENST00000436754 PPP2R1AP30153 589 aa14.75□□□□□ -0.05
PDLIM2-211ENST00000436754 INTS5Q6P9B9 1019 aaKnown RBP14.75□□□□□ -0.05
PDLIM2-211ENST00000436754 SLC52A2Q9HAB3 445 aa14.75□□□□□ -0.05
PDLIM2-211ENST00000436754 KIAA1551Q9HCM1 1747 aa14.75□□□□□ -0.05
PDLIM2-211ENST00000436754 USP42Q9H9J4 1324 aaKnown RBP14.74□□□□□ -0.05
PDLIM2-211ENST00000436754 KCNA3P22001 575 aa14.74□□□□□ -0.05
PDLIM2-211ENST00000436754 LGR6Q9HBX8 967 aa14.74□□□□□ -0.05
PDLIM2-211ENST00000436754 WWC3Q9ULE0 1092 aa14.74□□□□□ -0.05
PDLIM2-211ENST00000436754 SCN11AQ9UI33 1791 aa14.74□□□□□ -0.05
PDLIM2-211ENST00000436754 C4AP0C0L4 1744 aa14.74□□□□□ -0.05
PDLIM2-211ENST00000436754 VIRMAQ69YN4 1812 aaKnown RBP14.73□□□□□ -0.05
PDLIM2-211ENST00000436754 RNMTO43148 476 aaKnown RBP14.73□□□□□ -0.05
PDLIM2-211ENST00000436754 DPEP1P16444 411 aa14.73□□□□□ -0.05
PDLIM2-211ENST00000436754 TM4SF1P30408 202 aa14.73□□□□□ -0.05
PDLIM2-211ENST00000436754 BCS1LQ9Y276 419 aa14.73□□□□□ -0.05
PDLIM2-211ENST00000436754 ZEB1P37275 1124 aaPredicted RBP14.72□□□□□ -0.05
PDLIM2-211ENST00000436754 FKBP8Q14318 412 aa14.72□□□□□ -0.05
PDLIM2-211ENST00000436754 VSIG10Q8N0Z9 540 aa14.72□□□□□ -0.05
PDLIM2-211ENST00000436754 N4BP2Q86UW6 1770 aaPredicted RBP14.71□□□□□ -0.05
PDLIM2-211ENST00000436754 KIF3CO14782 793 aa14.71□□□□□ -0.05
PDLIM2-211ENST00000436754 CYP19A1P11511 503 aaPredicted RBP14.71□□□□□ -0.05
PDLIM2-211ENST00000436754 HSPA6P17066 643 aa14.71□□□□□ -0.05
PDLIM2-211ENST00000436754 DDX10Q13206 875 aaKnown RBP14.71□□□□□ -0.05
PDLIM2-211ENST00000436754 MTHFSDQ2M296 383 aaKnown RBP14.71□□□□□ -0.05
PDLIM2-211ENST00000436754 ZNF526Q8TF50 670 aaPredicted RBP14.71□□□□□ -0.05
PDLIM2-211ENST00000436754 PIM2Q9P1W9 311 aa14.71□□□□□ -0.05
PDLIM2-211ENST00000436754 SRP68Q9UHB9 627 aaKnown RBP14.71□□□□□ -0.05
PDLIM2-211ENST00000436754 TJP1Q07157 1748 aa14.71□□□□□ -0.05
PDLIM2-211ENST00000436754 MRC1P22897 1456 aa14.7□□□□□ -0.06
PDLIM2-211ENST00000436754 FCHSD2O94868 740 aa14.7□□□□□ -0.06
PDLIM2-211ENST00000436754 ARHGAP27Q6ZUM4 889 aa14.7□□□□□ -0.06
PDLIM2-211ENST00000436754 DNAJC10Q8IXB1 793 aa14.7□□□□□ -0.06
PDLIM2-211ENST00000436754 NUDCQ9Y266 331 aa14.7□□□□□ -0.06
PDLIM2-211ENST00000436754 SOS1Q07889 1333 aaPredicted RBP14.69□□□□□ -0.06
PDLIM2-211ENST00000436754 ADAMTS7Q9UKP4 1686 aa14.69□□□□□ -0.06
PDLIM2-211ENST00000436754 ZPR1O75312 459 aa14.69□□□□□ -0.06
PDLIM2-211ENST00000436754 DDR1Q08345 913 aa14.69□□□□□ -0.06
PDLIM2-211ENST00000436754 BRCA1P38398 1863 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms