RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 CICQ96RK0 1608 aaPredicted RBP20.6■□□□□ 0.89
HDAC8-213ENST00000436675 KIF13BQ9NQT8 1826 aa20.6■□□□□ 0.89
HDAC8-213ENST00000436675 PHKG2P15735 406 aa20.59■□□□□ 0.89
HDAC8-213ENST00000436675 ARHGAP27Q6ZUM4 889 aa20.59■□□□□ 0.89
HDAC8-213ENST00000436675 IFNL2Q8IZJ0 200 aa20.59■□□□□ 0.89
HDAC8-213ENST00000436675 CDCA8Q53HL2 280 aa20.58■□□□□ 0.89
HDAC8-213ENST00000436675 TRAPPC3LQ5T215 181 aa20.58■□□□□ 0.89
HDAC8-213ENST00000436675 RBM42Q9BTD8 480 aaKnown RBP20.58■□□□□ 0.89
HDAC8-213ENST00000436675 ANKRD26Q9UPS8 1709 aa20.58■□□□□ 0.88
HDAC8-213ENST00000436675 WASHC2AQ641Q2 1341 aa20.57■□□□□ 0.88
HDAC8-213ENST00000436675 RTCBQ9Y3I0 505 aaKnown RBP20.57■□□□□ 0.88
HDAC8-213ENST00000436675 DPEP1P16444 411 aa20.56■□□□□ 0.88
HDAC8-213ENST00000436675 APLP1P51693 650 aa20.56■□□□□ 0.88
HDAC8-213ENST00000436675 NMRK2Q9NPI5 230 aa20.56■□□□□ 0.88
HDAC8-213ENST00000436675 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.56■□□□□ 0.885e-6■■□□□ 11.8
HDAC8-213ENST00000436675 FCHSD2O94868 740 aa20.55■□□□□ 0.88
HDAC8-213ENST00000436675 TNNT2P45379 298 aaPredicted RBP20.55■□□□□ 0.88
HDAC8-213ENST00000436675 TGFB2P61812 414 aa20.55■□□□□ 0.88
HDAC8-213ENST00000436675 SLC4A9Q96Q91 983 aa20.55■□□□□ 0.88
HDAC8-213ENST00000436675 TOMM70O94826 608 aa20.54■□□□□ 0.88
HDAC8-213ENST00000436675 NLGN1Q8N2Q7 840 aa20.54■□□□□ 0.88
HDAC8-213ENST00000436675 ARHGEF1Q92888 912 aaKnown RBP20.54■□□□□ 0.88
HDAC8-213ENST00000436675 C10orf71Q711Q0 1435 aa20.53■□□□□ 0.88
HDAC8-213ENST00000436675 CCDC87Q9NVE4 849 aa20.53■□□□□ 0.88
HDAC8-213ENST00000436675 POLKQ9UBT6 870 aa20.53■□□□□ 0.88
HDAC8-213ENST00000436675 C4AP0C0L4 1744 aa20.53■□□□□ 0.88
HDAC8-213ENST00000436675 KDRP35968 1356 aa20.52■□□□□ 0.88
HDAC8-213ENST00000436675 EIF4A2Q14240 407 aaKnown RBP20.52■□□□□ 0.88
HDAC8-213ENST00000436675 POLR3GLQ9BT43 218 aa20.52■□□□□ 0.88
HDAC8-213ENST00000436675 PARP3Q9Y6F1 533 aa20.52■□□□□ 0.88
HDAC8-213ENST00000436675 MYH14Q7Z406 1995 aaKnown RBP20.52■□□□□ 0.87
HDAC8-213ENST00000436675 BRCA1P38398 1863 aaKnown RBP20.52■□□□□ 0.87
HDAC8-213ENST00000436675 COL5A3P25940 1745 aaPredicted RBP20.51■□□□□ 0.87
HDAC8-213ENST00000436675 GYS1P13807 737 aa20.51■□□□□ 0.87
HDAC8-213ENST00000436675 RFC4P35249 363 aa20.51■□□□□ 0.87
HDAC8-213ENST00000436675 DNAJC5GQ8N7S2 189 aa20.51■□□□□ 0.87
HDAC8-213ENST00000436675 HTRA3P83110 453 aa20.49■□□□□ 0.87
HDAC8-213ENST00000436675 C9orf131Q5VYM1 1079 aa20.49■□□□□ 0.87
HDAC8-213ENST00000436675 RPS6KA4O75676 772 aa20.48■□□□□ 0.87
HDAC8-213ENST00000436675 RC3H1Q5TC82 1133 aaKnown RBP20.48■□□□□ 0.87
HDAC8-213ENST00000436675 ARFGEF1Q9Y6D6 1849 aa20.48■□□□□ 0.87
HDAC8-213ENST00000436675 WDR90Q96KV7 1748 aa20.47■□□□□ 0.87
HDAC8-213ENST00000436675 ERVV-2B6SEH9 535 aa20.47■□□□□ 0.87
HDAC8-213ENST00000436675 ADRA2BP18089 450 aa20.47■□□□□ 0.87
HDAC8-213ENST00000436675 KCNA3P22001 575 aa20.47■□□□□ 0.87
HDAC8-213ENST00000436675 C16orf71Q8IYS4 520 aaPredicted RBP20.47■□□□□ 0.87
HDAC8-213ENST00000436675 CNTNAP4Q9C0A0 1308 aa20.47■□□□□ 0.87
HDAC8-213ENST00000436675 ZNF831Q5JPB2 1677 aa20.46■□□□□ 0.87
HDAC8-213ENST00000436675 PTCD1O75127 700 aaKnown RBP20.46■□□□□ 0.87
HDAC8-213ENST00000436675 CABP4P57796 275 aa20.46■□□□□ 0.87
HDAC8-213ENST00000436675 ZNF530Q6P9A1 599 aaPredicted RBP20.46■□□□□ 0.87
HDAC8-213ENST00000436675 DCAF5Q96JK2 942 aa20.46■□□□□ 0.87
HDAC8-213ENST00000436675 SRP68Q9UHB9 627 aaKnown RBP20.46■□□□□ 0.87
HDAC8-213ENST00000436675 HSP90AB1P08238 724 aaKnown RBP20.44■□□□□ 0.86
HDAC8-213ENST00000436675 PLEKHO1Q53GL0 409 aaPredicted RBP20.44■□□□□ 0.86
HDAC8-213ENST00000436675 RBM46Q8TBY0 533 aaKnown RBP20.44■□□□□ 0.86
HDAC8-213ENST00000436675 PIM2Q9P1W9 311 aa20.44■□□□□ 0.86
HDAC8-213ENST00000436675 KDM6AO15550 1401 aaPredicted RBP20.44■□□□□ 0.86
HDAC8-213ENST00000436675 KCPQ6ZWJ8 1503 aa20.43■□□□□ 0.86
HDAC8-213ENST00000436675 RNF181Q9P0P0 153 aa20.43■□□□□ 0.86
HDAC8-213ENST00000436675 CHRNA5P30532 468 aa20.42■□□□□ 0.86
HDAC8-213ENST00000436675 CRKLP46109 303 aaKnown RBP20.42■□□□□ 0.86
HDAC8-213ENST00000436675 FKBP8Q14318 412 aa20.42■□□□□ 0.86
HDAC8-213ENST00000436675 DALRD3Q5D0E6 543 aaKnown RBP20.42■□□□□ 0.86
HDAC8-213ENST00000436675 RRAGCQ9HB90 399 aa20.42■□□□□ 0.86
HDAC8-213ENST00000436675 DDR1Q08345 913 aa20.41■□□□□ 0.86
HDAC8-213ENST00000436675 SBF1O95248 1867 aa20.41■□□□□ 0.86
HDAC8-213ENST00000436675 MTHFSP49914 203 aa20.4■□□□□ 0.86
HDAC8-213ENST00000436675 PLEKHG2Q9H7P9 1386 aa20.4■□□□□ 0.86
HDAC8-213ENST00000436675 KDM2BQ8NHM5 1336 aa20.39■□□□□ 0.85
HDAC8-213ENST00000436675 AEBP1Q8IUX7 1158 aa20.39■□□□□ 0.85
HDAC8-213ENST00000436675 NFATC2IPQ8NCF5 419 aa20.39■□□□□ 0.85
HDAC8-213ENST00000436675 KLRG1Q96E93 195 aa20.39■□□□□ 0.85
HDAC8-213ENST00000436675 USP42Q9H9J4 1324 aaKnown RBP20.38■□□□□ 0.85
HDAC8-213ENST00000436675 C1orf141Q5JVX7 400 aa20.38■□□□□ 0.85
HDAC8-213ENST00000436675 TJP1Q07157 1748 aa20.38■□□□□ 0.85
HDAC8-213ENST00000436675 CAPN15O75808 1086 aa20.37■□□□□ 0.85
HDAC8-213ENST00000436675 AMOTQ4VCS5 1084 aa20.37■□□□□ 0.85
HDAC8-213ENST00000436675 COL13A1Q5TAT6 717 aaPredicted RBP20.37■□□□□ 0.85
HDAC8-213ENST00000436675 FSTL1Q12841 308 aa20.36■□□□□ 0.85
HDAC8-213ENST00000436675 PCNTO95613 3336 aa20.35■□□□□ 0.85
HDAC8-213ENST00000436675 RASSF7Q02833 373 aa20.35■□□□□ 0.85
HDAC8-213ENST00000436675 TNRC6CQ9HCJ0 1690 aaKnown RBP20.35■□□□□ 0.85
HDAC8-213ENST00000436675 POLRMTO00411 1230 aaKnown RBP20.34■□□□□ 0.85
HDAC8-213ENST00000436675 INTS5Q6P9B9 1019 aaKnown RBP20.34■□□□□ 0.85
HDAC8-213ENST00000436675 USPL1Q5W0Q7 1092 aa20.33■□□□□ 0.85
HDAC8-213ENST00000436675 SULT6B1Q6IMI4 303 aa20.33■□□□□ 0.85
HDAC8-213ENST00000436675 DNAJC10Q8IXB1 793 aa20.33■□□□□ 0.85
HDAC8-213ENST00000436675 SCN11AQ9UI33 1791 aa20.33■□□□□ 0.84
HDAC8-213ENST00000436675 CCDC88AQ3V6T2 1871 aa20.33■□□□□ 0.84
HDAC8-213ENST00000436675 AFDNP55196 1824 aaKnown RBP20.32■□□□□ 0.84
HDAC8-213ENST00000436675 ZPR1O75312 459 aa20.32■□□□□ 0.84
HDAC8-213ENST00000436675 TM4SF1P30408 202 aa20.32■□□□□ 0.84
HDAC8-213ENST00000436675 JMYQ8N9B5 988 aa20.32■□□□□ 0.84
HDAC8-213ENST00000436675 PANK3Q9H999 370 aa20.32■□□□□ 0.84
HDAC8-213ENST00000436675 ADAMTS7Q9UKP4 1686 aa20.32■□□□□ 0.84
HDAC8-213ENST00000436675 MORC1Q86VD1 984 aa20.3■□□□□ 0.84
HDAC8-213ENST00000436675 SMC1BQ8NDV3 1235 aa20.3■□□□□ 0.84
HDAC8-213ENST00000436675 VIRMAQ69YN4 1812 aaKnown RBP20.28■□□□□ 0.84
HDAC8-213ENST00000436675 SLC39A6Q13433 755 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms