RNA–Protein interactions for RNA: ENST00000435061.1

SREBF2-203, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 3

Gene SREBF2, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-203ENST00000435061 MSL1Q68DK7 614 aa23.45■■□□□ 1.34
SREBF2-203ENST00000435061 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.44■■□□□ 1.34
SREBF2-203ENST00000435061 ITPK1Q13572 414 aa23.44■■□□□ 1.34
SREBF2-203ENST00000435061 GPR162Q16538 588 aa23.44■■□□□ 1.34
SREBF2-203ENST00000435061 UTRNP46939 3433 aa23.44■■□□□ 1.34
SREBF2-203ENST00000435061 CABP4P57796 275 aa23.43■■□□□ 1.34
SREBF2-203ENST00000435061 AMIGO3Q86WK7 504 aa23.43■■□□□ 1.34
SREBF2-203ENST00000435061 NPC1L1Q9UHC9 1359 aa23.42■■□□□ 1.34
SREBF2-203ENST00000435061 PHF14O94880 888 aa23.42■■□□□ 1.34
SREBF2-203ENST00000435061 CC2D1BQ5T0F9 858 aaKnown RBP23.42■■□□□ 1.34
SREBF2-203ENST00000435061 KDM6AO15550 1401 aaPredicted RBP23.42■■□□□ 1.34
SREBF2-203ENST00000435061 NLGN2Q8NFZ4 835 aa23.41■■□□□ 1.34
SREBF2-203ENST00000435061 GNPATO15228 680 aa23.4■■□□□ 1.34
SREBF2-203ENST00000435061 CD2APQ9Y5K6 639 aa23.4■■□□□ 1.34
SREBF2-203ENST00000435061 RBM42Q9BTD8 480 aaKnown RBP23.39■■□□□ 1.33
SREBF2-203ENST00000435061 DIAPH1O60610 1272 aaKnown RBP23.38■■□□□ 1.33
SREBF2-203ENST00000435061 SLC4A9Q96Q91 983 aa23.38■■□□□ 1.33
SREBF2-203ENST00000435061 UBR3Q6ZT12 1888 aa23.38■■□□□ 1.33
SREBF2-203ENST00000435061 AKAP4Q5JQC9 854 aa23.37■■□□□ 1.33
SREBF2-203ENST00000435061 RC3H1Q5TC82 1133 aaKnown RBP23.37■■□□□ 1.33
SREBF2-203ENST00000435061 SMIM5Q71RC9 77 aa23.37■■□□□ 1.33
SREBF2-203ENST00000435061 NFATC2IPQ8NCF5 419 aa23.37■■□□□ 1.33
SREBF2-203ENST00000435061 PELP1Q8IZL8 1130 aaKnown RBP23.35■■□□□ 1.33
SREBF2-203ENST00000435061 RTCBQ9Y3I0 505 aaKnown RBP23.35■■□□□ 1.33
SREBF2-203ENST00000435061 ZNF831Q5JPB2 1677 aa23.35■■□□□ 1.33
SREBF2-203ENST00000435061 HMOX1P09601 288 aa23.34■■□□□ 1.33
SREBF2-203ENST00000435061 TRAPPC3LQ5T215 181 aa23.34■■□□□ 1.33
SREBF2-203ENST00000435061 CNTNAP4Q9C0A0 1308 aa23.33■■□□□ 1.33
SREBF2-203ENST00000435061 GRIN3BO60391 1043 aa23.33■■□□□ 1.33
SREBF2-203ENST00000435061 ADRA2BP18089 450 aa23.33■■□□□ 1.33
SREBF2-203ENST00000435061 ZNF784Q8NCA9 323 aaPredicted RBP23.33■■□□□ 1.33
SREBF2-203ENST00000435061 CHD4Q14839 1912 aa23.32■■□□□ 1.32
SREBF2-203ENST00000435061 PTCD1O75127 700 aaKnown RBP23.31■■□□□ 1.32
SREBF2-203ENST00000435061 RPS6KA4O75676 772 aa23.31■■□□□ 1.32
SREBF2-203ENST00000435061 GOLGB1Q14789 3259 aaKnown RBP23.3■■□□□ 1.32
SREBF2-203ENST00000435061 SLC52A2Q9HAB3 445 aa23.3■■□□□ 1.32
SREBF2-203ENST00000435061 YBX3P16989 372 aaKnown RBP eCLIP23.29■■□□□ 1.322e-7■■■□□ 15.2
SREBF2-203ENST00000435061 NLGN1Q8N2Q7 840 aa23.29■■□□□ 1.32
SREBF2-203ENST00000435061 LGR6Q9HBX8 967 aa23.29■■□□□ 1.32
SREBF2-203ENST00000435061 RNMTO43148 476 aaKnown RBP23.28■■□□□ 1.32
SREBF2-203ENST00000435061 CNGB1Q14028 1251 aaPredicted RBP23.28■■□□□ 1.32
SREBF2-203ENST00000435061 MTHFSDQ2M296 383 aaKnown RBP23.28■■□□□ 1.32
SREBF2-203ENST00000435061 ARHGEF1Q92888 912 aaKnown RBP23.28■■□□□ 1.32
SREBF2-203ENST00000435061 MMP10P09238 476 aa23.26■■□□□ 1.31
SREBF2-203ENST00000435061 RFC4P35249 363 aa23.26■■□□□ 1.31
SREBF2-203ENST00000435061 SCN11AQ9UI33 1791 aa23.26■■□□□ 1.31
SREBF2-203ENST00000435061 COL3A1P02461 1466 aaPredicted RBP23.25■■□□□ 1.31
SREBF2-203ENST00000435061 CRKLP46109 303 aaKnown RBP23.25■■□□□ 1.31
SREBF2-203ENST00000435061 COL5A3P25940 1745 aaPredicted RBP23.25■■□□□ 1.31
SREBF2-203ENST00000435061 U2SURPO15042 1029 aaKnown RBP23.24■■□□□ 1.31
SREBF2-203ENST00000435061 CFAP53Q96M91 514 aa23.23■■□□□ 1.31
SREBF2-203ENST00000435061 MRC1P22897 1456 aa23.23■■□□□ 1.31
SREBF2-203ENST00000435061 GYS1P13807 737 aa23.22■■□□□ 1.31
SREBF2-203ENST00000435061 GAS2L2Q8NHY3 880 aa23.21■■□□□ 1.31
SREBF2-203ENST00000435061 MYH14Q7Z406 1995 aaKnown RBP23.2■■□□□ 1.3
SREBF2-203ENST00000435061 CICQ96RK0 1608 aaPredicted RBP23.19■■□□□ 1.3
SREBF2-203ENST00000435061 SLC39A6Q13433 755 aa23.19■■□□□ 1.3
SREBF2-203ENST00000435061 INTS5Q6P9B9 1019 aaKnown RBP23.19■■□□□ 1.3
SREBF2-203ENST00000435061 DNAJC10Q8IXB1 793 aa23.19■■□□□ 1.3
SREBF2-203ENST00000435061 TGFB2P61812 414 aa23.18■■□□□ 1.3
SREBF2-203ENST00000435061 VSIG10Q8N0Z9 540 aa23.18■■□□□ 1.3
SREBF2-203ENST00000435061 CCDC87Q9NVE4 849 aa23.18■■□□□ 1.3
SREBF2-203ENST00000435061 NUDCQ9Y266 331 aa23.18■■□□□ 1.3
SREBF2-203ENST00000435061 ADAMTS7Q9UKP4 1686 aa23.17■■□□□ 1.3
SREBF2-203ENST00000435061 GNAT3A8MTJ3 354 aa23.17■■□□□ 1.3
SREBF2-203ENST00000435061 PARP3Q9Y6F1 533 aa23.17■■□□□ 1.3
SREBF2-203ENST00000435061 USP42Q9H9J4 1324 aaKnown RBP23.16■■□□□ 1.3
SREBF2-203ENST00000435061 CYP19A1P11511 503 aaPredicted RBP23.16■■□□□ 1.3
SREBF2-203ENST00000435061 PPP2R1AP30153 589 aa23.16■■□□□ 1.3
SREBF2-203ENST00000435061 TJP1Q07157 1748 aa23.16■■□□□ 1.3
SREBF2-203ENST00000435061 IL17REQ8NFR9 667 aa23.15■■□□□ 1.3
SREBF2-203ENST00000435061 TEFQ10587 303 aa23.14■■□□□ 1.29
SREBF2-203ENST00000435061 TTC5Q8N0Z6 440 aa23.14■■□□□ 1.29
SREBF2-203ENST00000435061 SRP68Q9UHB9 627 aaKnown RBP23.14■■□□□ 1.29
SREBF2-203ENST00000435061 KCPQ6ZWJ8 1503 aa23.13■■□□□ 1.29
SREBF2-203ENST00000435061 SOS1Q07889 1333 aaPredicted RBP23.13■■□□□ 1.29
SREBF2-203ENST00000435061 PRKAR2BP31323 418 aa23.13■■□□□ 1.29
SREBF2-203ENST00000435061 RSPH6AQ9H0K4 717 aa23.13■■□□□ 1.29
SREBF2-203ENST00000435061 C10orf71Q711Q0 1435 aa23.13■■□□□ 1.29
SREBF2-203ENST00000435061 ZPR1O75312 459 aa23.12■■□□□ 1.29
SREBF2-203ENST00000435061 FKBP8Q14318 412 aa23.12■■□□□ 1.29
SREBF2-203ENST00000435061 PXDNLA1KZ92 1463 aa23.11■■□□□ 1.29
SREBF2-203ENST00000435061 PHACTR3Q96KR7 559 aa23.11■■□□□ 1.29
SREBF2-203ENST00000435061 WWC3Q9ULE0 1092 aa23.11■■□□□ 1.29
SREBF2-203ENST00000435061 C4AP0C0L4 1744 aa23.11■■□□□ 1.29
SREBF2-203ENST00000435061 KIF13BQ9NQT8 1826 aa23.1■■□□□ 1.29
SREBF2-203ENST00000435061 FCHSD2O94868 740 aa23.1■■□□□ 1.29
SREBF2-203ENST00000435061 STARD3NLO95772 234 aa23.1■■□□□ 1.29
SREBF2-203ENST00000435061 U2AF1L5P0DN76 240 aaPredicted RBP23.1■■□□□ 1.29
SREBF2-203ENST00000435061 U2AF1Q01081 240 aaKnown RBP eCLIP23.1■■□□□ 1.29
SREBF2-203ENST00000435061 ZNF790Q6PG37 636 aa23.1■■□□□ 1.29
SREBF2-203ENST00000435061 A0A0G2JLW4 131 aa23.09■■□□□ 1.29
SREBF2-203ENST00000435061 TEX13AQ9BXU3 409 aaPredicted RBP23.09■■□□□ 1.29
SREBF2-203ENST00000435061 ZBTB1Q9Y2K1 713 aa23.09■■□□□ 1.29
SREBF2-203ENST00000435061 VIRMAQ69YN4 1812 aaKnown RBP23.09■■□□□ 1.29
SREBF2-203ENST00000435061 CEMIPQ8WUJ3 1361 aa23.09■■□□□ 1.29
SREBF2-203ENST00000435061 TM4SF1P30408 202 aa23.08■■□□□ 1.29
SREBF2-203ENST00000435061 C1QTNF8P60827 252 aa23.08■■□□□ 1.29
SREBF2-203ENST00000435061 USPL1Q5W0Q7 1092 aa23.08■■□□□ 1.29
SREBF2-203ENST00000435061 NARFQ9UHQ1 456 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms