RNA–Protein interactions for RNA: ENST00000434939.1

ATG9A-211, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-211ENST00000434939 NFATC2IPQ8NCF5 419 aa20.41■□□□□ 0.86
ATG9A-211ENST00000434939 SLC16A10Q8TF71 515 aa20.41■□□□□ 0.86
ATG9A-211ENST00000434939 PLEKHG2Q9H7P9 1386 aa20.41■□□□□ 0.86
ATG9A-211ENST00000434939 LGR6Q9HBX8 967 aa20.4■□□□□ 0.86
ATG9A-211ENST00000434939 POLD1P28340 1107 aa20.39■□□□□ 0.85
ATG9A-211ENST00000434939 PPP2R1AP30153 589 aa20.39■□□□□ 0.85
ATG9A-211ENST00000434939 MTHFSDQ2M296 383 aaKnown RBP20.39■□□□□ 0.85
ATG9A-211ENST00000434939 TAF1LQ8IZX4 1826 aa20.39■□□□□ 0.85
ATG9A-211ENST00000434939 COL3A1P02461 1466 aaPredicted RBP20.38■□□□□ 0.85
ATG9A-211ENST00000434939 AKAP4Q5JQC9 854 aa20.38■□□□□ 0.85
ATG9A-211ENST00000434939 CFAP53Q96M91 514 aa20.38■□□□□ 0.85
ATG9A-211ENST00000434939 SYT17Q9BSW7 474 aa20.38■□□□□ 0.85
ATG9A-211ENST00000434939 QSER1Q2KHR3 1735 aa20.38■□□□□ 0.85
ATG9A-211ENST00000434939 C4BP0C0L5 1744 aa20.37■□□□□ 0.85
ATG9A-211ENST00000434939 PTCD1O75127 700 aaKnown RBP20.37■□□□□ 0.85
ATG9A-211ENST00000434939 SLC4A9Q96Q91 983 aa20.37■□□□□ 0.85
ATG9A-211ENST00000434939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.35■□□□□ 0.85
ATG9A-211ENST00000434939 DCAF8L1A6NGE4 600 aa20.35■□□□□ 0.85
ATG9A-211ENST00000434939 GNPATO15228 680 aa20.35■□□□□ 0.85
ATG9A-211ENST00000434939 HMGB2P26583 209 aaKnown RBP20.35■□□□□ 0.85
ATG9A-211ENST00000434939 RNMTO43148 476 aaKnown RBP20.34■□□□□ 0.85
ATG9A-211ENST00000434939 FLAD1Q8NFF5 587 aa20.34■□□□□ 0.85
ATG9A-211ENST00000434939 SLC52A2Q9HAB3 445 aa20.32■□□□□ 0.84
ATG9A-211ENST00000434939 U2AF1L5P0DN76 240 aaPredicted RBP20.31■□□□□ 0.84
ATG9A-211ENST00000434939 PRKAR2BP31323 418 aa20.31■□□□□ 0.84
ATG9A-211ENST00000434939 U2AF1Q01081 240 aaKnown RBP eCLIP20.31■□□□□ 0.84
ATG9A-211ENST00000434939 SLC39A6Q13433 755 aa20.31■□□□□ 0.84
ATG9A-211ENST00000434939 NUDCQ9Y266 331 aa20.31■□□□□ 0.84
ATG9A-211ENST00000434939 DDX10Q13206 875 aaKnown RBP20.3■□□□□ 0.84
ATG9A-211ENST00000434939 PHACTR3Q96KR7 559 aa20.3■□□□□ 0.84
ATG9A-211ENST00000434939 SCN11AQ9UI33 1791 aa20.3■□□□□ 0.84
ATG9A-211ENST00000434939 SSFA2P28290 1259 aa20.29■□□□□ 0.84
ATG9A-211ENST00000434939 UBR3Q6ZT12 1888 aa20.28■□□□□ 0.84
ATG9A-211ENST00000434939 PELP1Q8IZL8 1130 aaKnown RBP20.28■□□□□ 0.84
ATG9A-211ENST00000434939 NLGN2Q8NFZ4 835 aa20.28■□□□□ 0.84
ATG9A-211ENST00000434939 RSPH6AQ9H0K4 717 aa20.28■□□□□ 0.84
ATG9A-211ENST00000434939 RTCBQ9Y3I0 505 aaKnown RBP20.28■□□□□ 0.84
ATG9A-211ENST00000434939 TRAPPC3LQ5T215 181 aa20.27■□□□□ 0.84
ATG9A-211ENST00000434939 GAS2L2Q8NHY3 880 aa20.27■□□□□ 0.84
ATG9A-211ENST00000434939 GNAT3A8MTJ3 354 aa20.26■□□□□ 0.83
ATG9A-211ENST00000434939 IL17REQ8NFR9 667 aa20.26■□□□□ 0.83
ATG9A-211ENST00000434939 COL24A1Q17RW2 1714 aa20.25■□□□□ 0.83
ATG9A-211ENST00000434939 MAP3K5Q99683 1374 aa20.25■□□□□ 0.83
ATG9A-211ENST00000434939 DNAJC10Q8IXB1 793 aa20.25■□□□□ 0.83
ATG9A-211ENST00000434939 CRKLP46109 303 aaKnown RBP20.24■□□□□ 0.83
ATG9A-211ENST00000434939 GPR162Q16538 588 aa20.24■□□□□ 0.83
ATG9A-211ENST00000434939 RC3H1Q5TC82 1133 aaKnown RBP20.24■□□□□ 0.83
ATG9A-211ENST00000434939 ARHGEF1Q92888 912 aaKnown RBP20.24■□□□□ 0.83
ATG9A-211ENST00000434939 CNTNAP4Q9C0A0 1308 aa20.24■□□□□ 0.83
ATG9A-211ENST00000434939 RPS6KA4O75676 772 aa20.23■□□□□ 0.83
ATG9A-211ENST00000434939 YY1P25490 414 aa20.23■□□□□ 0.83
ATG9A-211ENST00000434939 TEFQ10587 303 aa20.22■□□□□ 0.83
ATG9A-211ENST00000434939 VIRMAQ69YN4 1812 aaKnown RBP20.22■□□□□ 0.83
ATG9A-211ENST00000434939 RFC4P35249 363 aa20.21■□□□□ 0.83
ATG9A-211ENST00000434939 MRC1P22897 1456 aa20.21■□□□□ 0.83
ATG9A-211ENST00000434939 COL5A3P25940 1745 aaPredicted RBP20.21■□□□□ 0.83
ATG9A-211ENST00000434939 FCHSD2O94868 740 aa20.2■□□□□ 0.82
ATG9A-211ENST00000434939 INTS5Q6P9B9 1019 aaKnown RBP20.2■□□□□ 0.82
ATG9A-211ENST00000434939 WWC3Q9ULE0 1092 aa20.2■□□□□ 0.82
ATG9A-211ENST00000434939 ZNF831Q5JPB2 1677 aa20.19■□□□□ 0.82
ATG9A-211ENST00000434939 MYH14Q7Z406 1995 aaKnown RBP20.19■□□□□ 0.82
ATG9A-211ENST00000434939 MMP10P09238 476 aa20.19■□□□□ 0.82
ATG9A-211ENST00000434939 MCM10Q7L590 875 aa20.19■□□□□ 0.82
ATG9A-211ENST00000434939 TTC5Q8N0Z6 440 aa20.19■□□□□ 0.82
ATG9A-211ENST00000434939 SRP68Q9UHB9 627 aaKnown RBP20.19■□□□□ 0.82
ATG9A-211ENST00000434939 TJP1Q07157 1748 aa20.19■□□□□ 0.82
ATG9A-211ENST00000434939 DCTN1Q14203 1278 aa20.18■□□□□ 0.82
ATG9A-211ENST00000434939 CCDC87Q9NVE4 849 aa20.18■□□□□ 0.82
ATG9A-211ENST00000434939 ADAMTS7Q9UKP4 1686 aa20.18■□□□□ 0.82
ATG9A-211ENST00000434939 CYP19A1P11511 503 aaPredicted RBP20.17■□□□□ 0.82
ATG9A-211ENST00000434939 ADRA2BP18089 450 aa20.17■□□□□ 0.82
ATG9A-211ENST00000434939 KCPQ6ZWJ8 1503 aa20.17■□□□□ 0.82
ATG9A-211ENST00000434939 KCNQ3O43525 872 aa20.16■□□□□ 0.82
ATG9A-211ENST00000434939 GYS1P13807 737 aa20.16■□□□□ 0.82
ATG9A-211ENST00000434939 RTF1Q92541 710 aaKnown RBP20.16■□□□□ 0.82
ATG9A-211ENST00000434939 ZNF496Q96IT1 587 aaPredicted RBP20.16■□□□□ 0.82
ATG9A-211ENST00000434939 CD2APQ9Y5K6 639 aa20.16■□□□□ 0.82
ATG9A-211ENST00000434939 BTBD11A6QL63 1104 aa20.15■□□□□ 0.82
ATG9A-211ENST00000434939 RALBP1Q15311 655 aa20.15■□□□□ 0.82
ATG9A-211ENST00000434939 ZNF790Q6PG37 636 aa20.15■□□□□ 0.82
ATG9A-211ENST00000434939 NLGN1Q8N2Q7 840 aa20.15■□□□□ 0.82
ATG9A-211ENST00000434939 YBX3P16989 372 aaKnown RBP eCLIP20.14■□□□□ 0.81
ATG9A-211ENST00000434939 CANXP27824 592 aaKnown RBP20.14■□□□□ 0.81
ATG9A-211ENST00000434939 ZBTB1Q9Y2K1 713 aa20.14■□□□□ 0.81
ATG9A-211ENST00000434939 CEMIPQ8WUJ3 1361 aa20.13■□□□□ 0.81
ATG9A-211ENST00000434939 NEFMP07197 916 aa20.13■□□□□ 0.81
ATG9A-211ENST00000434939 FKBP8Q14318 412 aa20.12■□□□□ 0.81
ATG9A-211ENST00000434939 VSIG10Q8N0Z9 540 aa20.12■□□□□ 0.81
ATG9A-211ENST00000434939 SOS1Q07889 1333 aaPredicted RBP20.11■□□□□ 0.81
ATG9A-211ENST00000434939 USP42Q9H9J4 1324 aaKnown RBP20.11■□□□□ 0.81
ATG9A-211ENST00000434939 USPL1Q5W0Q7 1092 aa20.11■□□□□ 0.81
ATG9A-211ENST00000434939 PARP3Q9Y6F1 533 aa20.11■□□□□ 0.81
ATG9A-211ENST00000434939 C4AP0C0L4 1744 aa20.1■□□□□ 0.81
ATG9A-211ENST00000434939 HEG1Q9ULI3 1381 aa20.1■□□□□ 0.81
ATG9A-211ENST00000434939 ZPR1O75312 459 aa20.1■□□□□ 0.81
ATG9A-211ENST00000434939 FMNL2Q96PY5 1086 aa20.1■□□□□ 0.81
ATG9A-211ENST00000434939 PLEKHF1Q96S99 279 aa20.1■□□□□ 0.81
ATG9A-211ENST00000434939 MIS18AQ9NYP9 233 aa20.1■□□□□ 0.81
ATG9A-211ENST00000434939 ZNF330Q9Y3S2 320 aaPredicted RBP20.1■□□□□ 0.81
ATG9A-211ENST00000434939 STARD3NLO95772 234 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms