RNA–Protein interactions for RNA: ENST00000434671.1

DDX1-203, Transcript of DEAD-box helicase 1, humanhuman

TSL 4

Gene DDX1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-203ENST00000434671 IL13P35225 146 aa22.74■■□□□ 1.23
DDX1-203ENST00000434671 RBM42Q9BTD8 480 aaKnown RBP22.74■■□□□ 1.23
DDX1-203ENST00000434671 ATG3Q9NT62 314 aa22.74■■□□□ 1.23
DDX1-203ENST00000434671 LINC00116Q8NCU8 138 aa22.73■■□□□ 1.23
DDX1-203ENST00000434671 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.72■■□□□ 1.23
DDX1-203ENST00000434671 GNPATO15228 680 aa22.72■■□□□ 1.23
DDX1-203ENST00000434671 HMOX1P09601 288 aa22.7■■□□□ 1.22
DDX1-203ENST00000434671 ITPK1Q13572 414 aa22.7■■□□□ 1.22
DDX1-203ENST00000434671 SMIM5Q71RC9 77 aa22.7■■□□□ 1.22
DDX1-203ENST00000434671 PER1O15534 1290 aaPredicted RBP22.69■■□□□ 1.22
DDX1-203ENST00000434671 DIAPH1O60610 1272 aaKnown RBP22.69■■□□□ 1.22
DDX1-203ENST00000434671 SSFA2P28290 1259 aa22.69■■□□□ 1.22
DDX1-203ENST00000434671 NLGN2Q8NFZ4 835 aa22.69■■□□□ 1.22
DDX1-203ENST00000434671 KDM6AO15550 1401 aaPredicted RBP22.68■■□□□ 1.22
DDX1-203ENST00000434671 KDRP35968 1356 aa22.68■■□□□ 1.22
DDX1-203ENST00000434671 COL24A1Q17RW2 1714 aa22.68■■□□□ 1.22
DDX1-203ENST00000434671 AMIGO3Q86WK7 504 aa22.67■■□□□ 1.22
DDX1-203ENST00000434671 PTCD1O75127 700 aaKnown RBP22.66■■□□□ 1.22
DDX1-203ENST00000434671 NFATC2IPQ8NCF5 419 aa22.65■■□□□ 1.22
DDX1-203ENST00000434671 RTCBQ9Y3I0 505 aaKnown RBP22.65■■□□□ 1.22
DDX1-203ENST00000434671 UBR3Q6ZT12 1888 aa22.64■■□□□ 1.22
DDX1-203ENST00000434671 UTRNP46939 3433 aa22.64■■□□□ 1.22
DDX1-203ENST00000434671 U2SURPO15042 1029 aaKnown RBP22.64■■□□□ 1.21
DDX1-203ENST00000434671 AKAP4Q5JQC9 854 aa22.64■■□□□ 1.21
DDX1-203ENST00000434671 NPC1L1Q9UHC9 1359 aa22.63■■□□□ 1.21
DDX1-203ENST00000434671 TRAPPC3LQ5T215 181 aa22.62■■□□□ 1.21
DDX1-203ENST00000434671 CD2APQ9Y5K6 639 aa22.61■■□□□ 1.21
DDX1-203ENST00000434671 CFAP53Q96M91 514 aa22.6■■□□□ 1.21
DDX1-203ENST00000434671 SLC4A9Q96Q91 983 aa22.6■■□□□ 1.21
DDX1-203ENST00000434671 CNTNAP4Q9C0A0 1308 aa22.58■■□□□ 1.21
DDX1-203ENST00000434671 RFC4P35249 363 aa22.58■■□□□ 1.21
DDX1-203ENST00000434671 RC3H1Q5TC82 1133 aaKnown RBP22.58■■□□□ 1.21
DDX1-203ENST00000434671 SLC52A2Q9HAB3 445 aa22.58■■□□□ 1.21
DDX1-203ENST00000434671 RNMTO43148 476 aaKnown RBP22.57■■□□□ 1.2
DDX1-203ENST00000434671 GRIN3BO60391 1043 aa22.57■■□□□ 1.2
DDX1-203ENST00000434671 ADRA2BP18089 450 aa22.57■■□□□ 1.2
DDX1-203ENST00000434671 MTHFSDQ2M296 383 aaKnown RBP22.57■■□□□ 1.2
DDX1-203ENST00000434671 ZNF784Q8NCA9 323 aaPredicted RBP22.57■■□□□ 1.2
DDX1-203ENST00000434671 LGR6Q9HBX8 967 aa22.57■■□□□ 1.2
DDX1-203ENST00000434671 CHD4Q14839 1912 aa22.57■■□□□ 1.2
DDX1-203ENST00000434671 MMP10P09238 476 aa22.56■■□□□ 1.2
DDX1-203ENST00000434671 RPS6KA4O75676 772 aa22.55■■□□□ 1.2
DDX1-203ENST00000434671 YBX3P16989 372 aaKnown RBP eCLIP22.55■■□□□ 1.2
DDX1-203ENST00000434671 CRKLP46109 303 aaKnown RBP22.55■■□□□ 1.2
DDX1-203ENST00000434671 SCN11AQ9UI33 1791 aa22.55■■□□□ 1.2
DDX1-203ENST00000434671 ZNF831Q5JPB2 1677 aa22.55■■□□□ 1.2
DDX1-203ENST00000434671 NLGN1Q8N2Q7 840 aa22.54■■□□□ 1.2
DDX1-203ENST00000434671 ARHGEF1Q92888 912 aaKnown RBP22.54■■□□□ 1.2
DDX1-203ENST00000434671 WWC3Q9ULE0 1092 aa22.54■■□□□ 1.2
DDX1-203ENST00000434671 GOLGB1Q14789 3259 aaKnown RBP22.52■■□□□ 1.2
DDX1-203ENST00000434671 SLC39A6Q13433 755 aa22.52■■□□□ 1.2
DDX1-203ENST00000434671 NUDCQ9Y266 331 aa22.52■■□□□ 1.2
DDX1-203ENST00000434671 COL3A1P02461 1466 aaPredicted RBP22.52■■□□□ 1.2
DDX1-203ENST00000434671 COL5A3P25940 1745 aaPredicted RBP22.51■■□□□ 1.19
DDX1-203ENST00000434671 GAS2L2Q8NHY3 880 aa22.51■■□□□ 1.19
DDX1-203ENST00000434671 TEFQ10587 303 aa22.49■■□□□ 1.19
DDX1-203ENST00000434671 DNAJC10Q8IXB1 793 aa22.49■■□□□ 1.19
DDX1-203ENST00000434671 TTC5Q8N0Z6 440 aa22.49■■□□□ 1.19
DDX1-203ENST00000434671 PARP3Q9Y6F1 533 aa22.49■■□□□ 1.19
DDX1-203ENST00000434671 GNAT3A8MTJ3 354 aa22.48■■□□□ 1.19
DDX1-203ENST00000434671 GYS1P13807 737 aa22.48■■□□□ 1.19
DDX1-203ENST00000434671 CCDC87Q9NVE4 849 aa22.48■■□□□ 1.19
DDX1-203ENST00000434671 MRC1P22897 1456 aa22.47■■□□□ 1.19
DDX1-203ENST00000434671 U2AF1L5P0DN76 240 aaPredicted RBP22.47■■□□□ 1.19
DDX1-203ENST00000434671 PRKAR2BP31323 418 aa22.47■■□□□ 1.19
DDX1-203ENST00000434671 U2AF1Q01081 240 aaKnown RBP eCLIP22.47■■□□□ 1.19
DDX1-203ENST00000434671 PPP2R1AP30153 589 aa22.46■■□□□ 1.19
DDX1-203ENST00000434671 SRP68Q9UHB9 627 aaKnown RBP22.46■■□□□ 1.19
DDX1-203ENST00000434671 CICQ96RK0 1608 aaPredicted RBP22.46■■□□□ 1.19
DDX1-203ENST00000434671 TJP1Q07157 1748 aa22.45■■□□□ 1.19
DDX1-203ENST00000434671 ZPR1O75312 459 aa22.45■■□□□ 1.18
DDX1-203ENST00000434671 INTS5Q6P9B9 1019 aaKnown RBP22.45■■□□□ 1.18
DDX1-203ENST00000434671 MYH14Q7Z406 1995 aaKnown RBP22.45■■□□□ 1.18
DDX1-203ENST00000434671 USP42Q9H9J4 1324 aaKnown RBP22.43■■□□□ 1.18
DDX1-203ENST00000434671 VIRMAQ69YN4 1812 aaKnown RBP22.43■■□□□ 1.18
DDX1-203ENST00000434671 CYP19A1P11511 503 aaPredicted RBP22.42■■□□□ 1.18
DDX1-203ENST00000434671 C4AP0C0L4 1744 aa22.42■■□□□ 1.18
DDX1-203ENST00000434671 FKBP8Q14318 412 aa22.41■■□□□ 1.18
DDX1-203ENST00000434671 VSIG10Q8N0Z9 540 aa22.41■■□□□ 1.18
DDX1-203ENST00000434671 RSPH6AQ9H0K4 717 aa22.41■■□□□ 1.18
DDX1-203ENST00000434671 KCPQ6ZWJ8 1503 aa22.41■■□□□ 1.18
DDX1-203ENST00000434671 A0A0G2JLW4 131 aa22.4■■□□□ 1.18
DDX1-203ENST00000434671 STARD3NLO95772 234 aa22.4■■□□□ 1.18
DDX1-203ENST00000434671 TGFB2P61812 414 aa22.4■■□□□ 1.18
DDX1-203ENST00000434671 IL17REQ8NFR9 667 aa22.4■■□□□ 1.18
DDX1-203ENST00000434671 RTF1Q92541 710 aaKnown RBP22.4■■□□□ 1.18
DDX1-203ENST00000434671 PHACTR3Q96KR7 559 aa22.4■■□□□ 1.18
DDX1-203ENST00000434671 ADAMTS7Q9UKP4 1686 aa22.39■■□□□ 1.18
DDX1-203ENST00000434671 SOS1Q07889 1333 aaPredicted RBP22.39■■□□□ 1.18
DDX1-203ENST00000434671 CANXP27824 592 aaKnown RBP22.39■■□□□ 1.17
DDX1-203ENST00000434671 USPL1Q5W0Q7 1092 aa22.39■■□□□ 1.17
DDX1-203ENST00000434671 BCS1LQ9Y276 419 aa22.39■■□□□ 1.17
DDX1-203ENST00000434671 PXDNLA1KZ92 1463 aa22.39■■□□□ 1.17
DDX1-203ENST00000434671 C10orf71Q711Q0 1435 aa22.39■■□□□ 1.17
DDX1-203ENST00000434671 GIGYF1O75420 1035 aaPredicted RBP22.38■■□□□ 1.17
DDX1-203ENST00000434671 NEFMP07197 916 aa22.38■■□□□ 1.17
DDX1-203ENST00000434671 ZNF790Q6PG37 636 aa22.38■■□□□ 1.17
DDX1-203ENST00000434671 ZBTB1Q9Y2K1 713 aa22.38■■□□□ 1.17
DDX1-203ENST00000434671 COL15A1P39059 1388 aa22.38■■□□□ 1.17
DDX1-203ENST00000434671 NPM2Q86SE8 214 aaKnown RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms