RNA–Protein interactions for RNA: ENST00000434648.5

CAPN2-203, Transcript of calpain 2, humanhuman

TSL 5

Gene CAPN2, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-203ENST00000434648 PAXIP1Q6ZW49 1069 aaPredicted RBP17.08■□□□□ 0.32
CAPN2-203ENST00000434648 SMG6Q86US8 1419 aaKnown RBP17.07■□□□□ 0.32
CAPN2-203ENST00000434648 PCDH11XQ9BZA7 1347 aa17.07■□□□□ 0.32
CAPN2-203ENST00000434648 PCDH11YQ9BZA8 1340 aa17.07■□□□□ 0.32
CAPN2-203ENST00000434648 MPRIPQ6WCQ1 1025 aa17.07■□□□□ 0.32
CAPN2-203ENST00000434648 AMIGO3Q86WK7 504 aa17.07■□□□□ 0.32
CAPN2-203ENST00000434648 REM2Q8IYK8 340 aaPredicted RBP17.07■□□□□ 0.32
CAPN2-203ENST00000434648 GGNBP2Q9H3C7 697 aa17.07■□□□□ 0.32
CAPN2-203ENST00000434648 HMGB2P26583 209 aaKnown RBP17.06■□□□□ 0.32
CAPN2-203ENST00000434648 HSP90AB2PQ58FF8 381 aa17.06■□□□□ 0.32
CAPN2-203ENST00000434648 C4BP0C0L5 1744 aa17.06■□□□□ 0.32
CAPN2-203ENST00000434648 TOGARAM1Q9Y4F4 1720 aa17.05■□□□□ 0.32
CAPN2-203ENST00000434648 CYP27B1O15528 508 aa17.05■□□□□ 0.32
CAPN2-203ENST00000434648 ZNF526Q8TF50 670 aaPredicted RBP17.05■□□□□ 0.32
CAPN2-203ENST00000434648 CFAP44Q96MT7 982 aa17.05■□□□□ 0.32
CAPN2-203ENST00000434648 INSRP06213 1382 aa17.04■□□□□ 0.32
CAPN2-203ENST00000434648 HSPA6P17066 643 aa17.04■□□□□ 0.32
CAPN2-203ENST00000434648 NUBP1P53384 320 aa17.04■□□□□ 0.32
CAPN2-203ENST00000434648 SMIM5Q71RC9 77 aa17.04■□□□□ 0.32
CAPN2-203ENST00000434648 VSIG10Q8N0Z9 540 aa17.04■□□□□ 0.32
CAPN2-203ENST00000434648 AK7Q96M32 723 aa17.04■□□□□ 0.32
CAPN2-203ENST00000434648 ITGB4P16144 1822 aa17.03■□□□□ 0.32
CAPN2-203ENST00000434648 IGSF1Q8N6C5 1336 aa17.03■□□□□ 0.32
CAPN2-203ENST00000434648 SMARCC1Q92922 1105 aaPredicted RBP17.03■□□□□ 0.32
CAPN2-203ENST00000434648 WWC3Q9ULE0 1092 aa17.03■□□□□ 0.32
CAPN2-203ENST00000434648 UBR3Q6ZT12 1888 aa17.03■□□□□ 0.32
CAPN2-203ENST00000434648 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.02■□□□□ 0.32
CAPN2-203ENST00000434648 PHF14O94880 888 aa17.02■□□□□ 0.32
CAPN2-203ENST00000434648 FLT4P35916 1363 aa17.02■□□□□ 0.31
CAPN2-203ENST00000434648 PIGBQ92521 554 aa17.01■□□□□ 0.31
CAPN2-203ENST00000434648 CREBZFQ9NS37 354 aa17.01■□□□□ 0.31
CAPN2-203ENST00000434648 KIF20BQ96Q89 1820 aa17■□□□□ 0.31
CAPN2-203ENST00000434648 KIF24Q5T7B8 1368 aa17■□□□□ 0.31
CAPN2-203ENST00000434648 PKD1L3Q7Z443 1732 aa16.99■□□□□ 0.31
CAPN2-203ENST00000434648 SSFA2P28290 1259 aa16.99■□□□□ 0.31
CAPN2-203ENST00000434648 TRIM26Q12899 539 aaPredicted RBP16.99■□□□□ 0.31
CAPN2-203ENST00000434648 NKX1-1Q15270 411 aaPredicted RBP16.99■□□□□ 0.31
CAPN2-203ENST00000434648 MAP2P11137 1827 aaKnown RBP16.98■□□□□ 0.31
CAPN2-203ENST00000434648 NSD3Q9BZ95 1437 aa16.98■□□□□ 0.31
CAPN2-203ENST00000434648 DCAF8Q5TAQ9 597 aa16.98■□□□□ 0.31
CAPN2-203ENST00000434648 LINC00116Q8NCU8 138 aa16.98■□□□□ 0.31
CAPN2-203ENST00000434648 LOC102724428A0A0B4J2F2 783 aa16.97■□□□□ 0.31
CAPN2-203ENST00000434648 KIF3CO14782 793 aa16.97■□□□□ 0.31
CAPN2-203ENST00000434648 SIK1P57059 783 aa16.97■□□□□ 0.31
CAPN2-203ENST00000434648 TMF1P82094 1093 aa16.96■□□□□ 0.31
CAPN2-203ENST00000434648 SPRYD3Q8NCJ5 442 aa16.96■□□□□ 0.31
CAPN2-203ENST00000434648 EMILIN1Q9Y6C2 1016 aa16.96■□□□□ 0.31
CAPN2-203ENST00000434648 NCAPD2Q15021 1401 aa16.96■□□□□ 0.3
CAPN2-203ENST00000434648 GNPATO15228 680 aa16.94■□□□□ 0.3
CAPN2-203ENST00000434648 ITPK1Q13572 414 aa16.94■□□□□ 0.3
CAPN2-203ENST00000434648 ASAP1Q9ULH1 1129 aa16.94■□□□□ 0.3
CAPN2-203ENST00000434648 SPG7Q9UQ90 795 aa16.94■□□□□ 0.3
CAPN2-203ENST00000434648 CICQ96RK0 1608 aaPredicted RBP16.94■□□□□ 0.3
CAPN2-203ENST00000434648 CARD14Q9BXL6 1004 aa16.93■□□□□ 0.3
CAPN2-203ENST00000434648 TMOD3Q9NYL9 352 aa16.93■□□□□ 0.3
CAPN2-203ENST00000434648 PPM1GO15355 546 aaPredicted RBP16.92■□□□□ 0.3
CAPN2-203ENST00000434648 MMP10P09238 476 aa16.92■□□□□ 0.3
CAPN2-203ENST00000434648 ATP6V1AP38606 617 aa16.92■□□□□ 0.3
CAPN2-203ENST00000434648 MNX1P50219 401 aaPredicted RBP16.92■□□□□ 0.3
CAPN2-203ENST00000434648 FAM212AQ96EL1 285 aa16.92■□□□□ 0.3
CAPN2-203ENST00000434648 PXDNLA1KZ92 1463 aa16.92■□□□□ 0.3
CAPN2-203ENST00000434648 KIAA1551Q9HCM1 1747 aa16.91■□□□□ 0.3
CAPN2-203ENST00000434648 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.91■□□□□ 0.33e-8■■■□□ 17.5
CAPN2-203ENST00000434648 RNF25Q96BH1 459 aaPredicted RBP16.9■□□□□ 0.3
CAPN2-203ENST00000434648 EYA1Q99502 592 aa16.9■□□□□ 0.3
CAPN2-203ENST00000434648 ATG3Q9NT62 314 aa16.9■□□□□ 0.3
CAPN2-203ENST00000434648 KIF13BQ9NQT8 1826 aa16.9■□□□□ 0.3
CAPN2-203ENST00000434648 WASHC2AQ641Q2 1341 aa16.9■□□□□ 0.3
CAPN2-203ENST00000434648 ANKRD26Q9UPS8 1709 aa16.9■□□□□ 0.3
CAPN2-203ENST00000434648 PHKG2P15735 406 aa16.89■□□□□ 0.29
CAPN2-203ENST00000434648 TGFB2P61812 414 aa16.89■□□□□ 0.29
CAPN2-203ENST00000434648 CDCA8Q53HL2 280 aa16.89■□□□□ 0.29
CAPN2-203ENST00000434648 N4BP2Q86UW6 1770 aaPredicted RBP16.89■□□□□ 0.29
CAPN2-203ENST00000434648 A0A0G2JLW4 131 aa16.88■□□□□ 0.29
CAPN2-203ENST00000434648 TOMM70O94826 608 aa16.88■□□□□ 0.29
CAPN2-203ENST00000434648 APLP1P51693 650 aa16.88■□□□□ 0.29
CAPN2-203ENST00000434648 IFNL2Q8IZJ0 200 aa16.88■□□□□ 0.29
CAPN2-203ENST00000434648 HS6ST3Q8IZP7 471 aa16.88■□□□□ 0.29
CAPN2-203ENST00000434648 PCGF6Q9BYE7 350 aa16.88■□□□□ 0.29
CAPN2-203ENST00000434648 TRAPPC3LQ5T215 181 aa16.87■□□□□ 0.29
CAPN2-203ENST00000434648 DNAJC5GQ8N7S2 189 aa16.87■□□□□ 0.29
CAPN2-203ENST00000434648 BCS1LQ9Y276 419 aa16.87■□□□□ 0.29
CAPN2-203ENST00000434648 KDRP35968 1356 aa16.87■□□□□ 0.29
CAPN2-203ENST00000434648 PITPNM1O00562 1244 aa16.86■□□□□ 0.29
CAPN2-203ENST00000434648 NLGN1Q8N2Q7 840 aa16.86■□□□□ 0.29
CAPN2-203ENST00000434648 SLC4A9Q96Q91 983 aa16.86■□□□□ 0.29
CAPN2-203ENST00000434648 POLR3GLQ9BT43 218 aa16.86■□□□□ 0.29
CAPN2-203ENST00000434648 RTCBQ9Y3I0 505 aaKnown RBP16.86■□□□□ 0.29
CAPN2-203ENST00000434648 C10orf71Q711Q0 1435 aa16.86■□□□□ 0.29
CAPN2-203ENST00000434648 ARHGAP27Q6ZUM4 889 aa16.85■□□□□ 0.29
CAPN2-203ENST00000434648 DPEP1P16444 411 aa16.84■□□□□ 0.29
CAPN2-203ENST00000434648 ARHGEF1Q92888 912 aaKnown RBP16.84■□□□□ 0.29
CAPN2-203ENST00000434648 NMRK2Q9NPI5 230 aa16.84■□□□□ 0.29
CAPN2-203ENST00000434648 POLKQ9UBT6 870 aa16.84■□□□□ 0.29
CAPN2-203ENST00000434648 TAOK2Q9UL54 1235 aa16.84■□□□□ 0.29
CAPN2-203ENST00000434648 RIOK3O14730 519 aaKnown RBP16.83■□□□□ 0.28
CAPN2-203ENST00000434648 C4AP0C0L4 1744 aa16.83■□□□□ 0.28
CAPN2-203ENST00000434648 GYS1P13807 737 aa16.83■□□□□ 0.28
CAPN2-203ENST00000434648 ZNF831Q5JPB2 1677 aa16.83■□□□□ 0.28
CAPN2-203ENST00000434648 FCHSD2O94868 740 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms