RNA–Protein interactions for RNA: ENST00000434503.5

LMBR1-210, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-210ENST00000434503 ATG3Q9NT62 314 aa28.46■■■□□ 2.15
LMBR1-210ENST00000434503 GNPATO15228 680 aa28.45■■■□□ 2.14
LMBR1-210ENST00000434503 IGSF1Q8N6C5 1336 aa28.44■■■□□ 2.14
LMBR1-210ENST00000434503 PLEKHG2Q9H7P9 1386 aa28.42■■■□□ 2.14
LMBR1-210ENST00000434503 PANK3Q9H999 370 aa28.42■■■□□ 2.14
LMBR1-210ENST00000434503 ADCY9O60503 1353 aa28.4■■■□□ 2.14
LMBR1-210ENST00000434503 WWC3Q9ULE0 1092 aa28.4■■■□□ 2.14
LMBR1-210ENST00000434503 GPBP1L1Q9HC44 474 aaPredicted RBP28.39■■■□□ 2.14
LMBR1-210ENST00000434503 ERVV-2B6SEH9 535 aa28.38■■■□□ 2.13
LMBR1-210ENST00000434503 KDRP35968 1356 aa28.37■■■□□ 2.13
LMBR1-210ENST00000434503 DCAF5Q96JK2 942 aa28.36■■■□□ 2.13
LMBR1-210ENST00000434503 SLC4A9Q96Q91 983 aa28.36■■■□□ 2.13
LMBR1-210ENST00000434503 HSP90AB1P08238 724 aaKnown RBP28.35■■■□□ 2.13
LMBR1-210ENST00000434503 MMP10P09238 476 aa28.35■■■□□ 2.13
LMBR1-210ENST00000434503 TRAPPC3LQ5T215 181 aa28.35■■■□□ 2.13
LMBR1-210ENST00000434503 RTCBQ9Y3I0 505 aaKnown RBP28.35■■■□□ 2.13
LMBR1-210ENST00000434503 ZNF831Q5JPB2 1677 aa28.35■■■□□ 2.13
LMBR1-210ENST00000434503 PLEKHO1Q53GL0 409 aaPredicted RBP28.34■■■□□ 2.13
LMBR1-210ENST00000434503 RBM42Q9BTD8 480 aaKnown RBP28.34■■■□□ 2.13
LMBR1-210ENST00000434503 ZNF526Q8TF50 670 aaPredicted RBP28.33■■■□□ 2.13
LMBR1-210ENST00000434503 RC3H1Q5TC82 1133 aaKnown RBP28.32■■■□□ 2.12
LMBR1-210ENST00000434503 NLGN1Q8N2Q7 840 aa28.32■■■□□ 2.12
LMBR1-210ENST00000434503 KIF13BQ9NQT8 1826 aa28.31■■■□□ 2.12
LMBR1-210ENST00000434503 AMOTQ4VCS5 1084 aa28.3■■■□□ 2.12
LMBR1-210ENST00000434503 ZNF530Q6P9A1 599 aaPredicted RBP28.3■■■□□ 2.12
LMBR1-210ENST00000434503 ARHGEF1Q92888 912 aaKnown RBP28.3■■■□□ 2.12
LMBR1-210ENST00000434503 COL5A3P25940 1745 aaPredicted RBP28.29■■■□□ 2.12
LMBR1-210ENST00000434503 KDM6AO15550 1401 aaPredicted RBP28.29■■■□□ 2.12
LMBR1-210ENST00000434503 ADRA2BP18089 450 aa28.29■■■□□ 2.12
LMBR1-210ENST00000434503 PXDNLA1KZ92 1463 aa28.28■■■□□ 2.12
LMBR1-210ENST00000434503 CNTNAP4Q9C0A0 1308 aa28.28■■■□□ 2.12
LMBR1-210ENST00000434503 CABP4P57796 275 aa28.28■■■□□ 2.12
LMBR1-210ENST00000434503 TGFB2P61812 414 aa28.28■■■□□ 2.12
LMBR1-210ENST00000434503 CICQ96RK0 1608 aaPredicted RBP28.28■■■□□ 2.12
LMBR1-210ENST00000434503 KIAA1551Q9HCM1 1747 aa28.27■■■□□ 2.12
LMBR1-210ENST00000434503 RPS6KA4O75676 772 aa28.27■■■□□ 2.12
LMBR1-210ENST00000434503 MORC1Q86VD1 984 aa28.26■■■□□ 2.11
LMBR1-210ENST00000434503 AEBP1Q8IUX7 1158 aa28.26■■■□□ 2.11
LMBR1-210ENST00000434503 N4BP2Q86UW6 1770 aaPredicted RBP28.26■■■□□ 2.11
LMBR1-210ENST00000434503 GYS1P13807 737 aa28.25■■■□□ 2.11
LMBR1-210ENST00000434503 RFC4P35249 363 aa28.25■■■□□ 2.11
LMBR1-210ENST00000434503 MTHFSP49914 203 aa28.25■■■□□ 2.11
LMBR1-210ENST00000434503 CEP350Q5VT06 3117 aa28.25■■■□□ 2.11
LMBR1-210ENST00000434503 MYH14Q7Z406 1995 aaKnown RBP28.24■■■□□ 2.11
LMBR1-210ENST00000434503 A0A0G2JLW4 131 aa28.24■■■□□ 2.11
LMBR1-210ENST00000434503 KNSTRNQ9Y448 316 aa28.24■■■□□ 2.11
LMBR1-210ENST00000434503 C10orf71Q711Q0 1435 aa28.24■■■□□ 2.11
LMBR1-210ENST00000434503 HSPA6P17066 643 aa28.23■■■□□ 2.11
LMBR1-210ENST00000434503 C1orf141Q5JVX7 400 aa28.23■■■□□ 2.11
LMBR1-210ENST00000434503 KIF7Q2M1P5 1343 aa28.22■■■□□ 2.11
LMBR1-210ENST00000434503 C4AP0C0L4 1744 aa28.22■■■□□ 2.11
LMBR1-210ENST00000434503 CCDC87Q9NVE4 849 aa28.22■■■□□ 2.11
LMBR1-210ENST00000434503 BCS1LQ9Y276 419 aa28.22■■■□□ 2.11
LMBR1-210ENST00000434503 PTCD1O75127 700 aaKnown RBP28.21■■■□□ 2.11
LMBR1-210ENST00000434503 NFATC2IPQ8NCF5 419 aa28.21■■■□□ 2.11
LMBR1-210ENST00000434503 SULT6B1Q6IMI4 303 aa28.2■■■□□ 2.1
LMBR1-210ENST00000434503 PARP3Q9Y6F1 533 aa28.2■■■□□ 2.1
LMBR1-210ENST00000434503 KIF3CO14782 793 aa28.19■■■□□ 2.1
LMBR1-210ENST00000434503 DPEP1P16444 411 aa28.19■■■□□ 2.1
LMBR1-210ENST00000434503 CRKLP46109 303 aaKnown RBP28.17■■■□□ 2.1
LMBR1-210ENST00000434503 IL13P35225 146 aa28.16■■■□□ 2.1
LMBR1-210ENST00000434503 AMER1Q5JTC6 1135 aaPredicted RBP28.15■■■□□ 2.1
LMBR1-210ENST00000434503 ARHGAP27Q6ZUM4 889 aa28.15■■■□□ 2.1
LMBR1-210ENST00000434503 BRCA1P38398 1863 aaKnown RBP28.15■■■□□ 2.1
LMBR1-210ENST00000434503 FCHSD2O94868 740 aa28.14■■■□□ 2.1
LMBR1-210ENST00000434503 SCN11AQ9UI33 1791 aa28.14■■■□□ 2.09
LMBR1-210ENST00000434503 TJP1Q07157 1748 aa28.13■■■□□ 2.09
LMBR1-210ENST00000434503 KCNA3P22001 575 aa28.13■■■□□ 2.09
LMBR1-210ENST00000434503 SRP68Q9UHB9 627 aaKnown RBP28.13■■■□□ 2.09
LMBR1-210ENST00000434503 USP42Q9H9J4 1324 aaKnown RBP28.12■■■□□ 2.09
LMBR1-210ENST00000434503 FKBP8Q14318 412 aa28.11■■■□□ 2.09
LMBR1-210ENST00000434503 AKAP4Q5JQC9 854 aa28.1■■■□□ 2.09
LMBR1-210ENST00000434503 INTS5Q6P9B9 1019 aaKnown RBP28.1■■■□□ 2.09
LMBR1-210ENST00000434503 IFFO2Q5TF58 517 aa28.09■■■□□ 2.09
LMBR1-210ENST00000434503 ARFGEF1Q9Y6D6 1849 aa28.08■■■□□ 2.09
LMBR1-210ENST00000434503 DDR1Q08345 913 aa28.08■■■□□ 2.09
LMBR1-210ENST00000434503 PIM2Q9P1W9 311 aa28.08■■■□□ 2.09
LMBR1-210ENST00000434503 PER1O15534 1290 aaPredicted RBP28.07■■■□□ 2.08
LMBR1-210ENST00000434503 SLC52A2Q9HAB3 445 aa28.07■■■□□ 2.08
LMBR1-210ENST00000434503 LGR6Q9HBX8 967 aa28.07■■■□□ 2.08
LMBR1-210ENST00000434503 DNAJC10Q8IXB1 793 aa28.06■■■□□ 2.08
LMBR1-210ENST00000434503 ADAMTS7Q9UKP4 1686 aa28.06■■■□□ 2.08
LMBR1-210ENST00000434503 TOMM70O94826 608 aa28.05■■■□□ 2.08
LMBR1-210ENST00000434503 TM4SF1P30408 202 aa28.04■■■□□ 2.08
LMBR1-210ENST00000434503 DALRD3Q5D0E6 543 aaKnown RBP28.03■■■□□ 2.08
LMBR1-210ENST00000434503 CC2D1BQ5T0F9 858 aaKnown RBP28.03■■■□□ 2.08
LMBR1-210ENST00000434503 C9orf131Q5VYM1 1079 aa28.03■■■□□ 2.08
LMBR1-210ENST00000434503 NMRK2Q9NPI5 230 aa28.03■■■□□ 2.08
LMBR1-210ENST00000434503 POLRMTO00411 1230 aaKnown RBP28.02■■■□□ 2.08
LMBR1-210ENST00000434503 RNMTO43148 476 aaKnown RBP28.02■■■□□ 2.08
LMBR1-210ENST00000434503 ZPR1O75312 459 aa28.02■■■□□ 2.08
LMBR1-210ENST00000434503 HMOX1P09601 288 aa28.02■■■□□ 2.08
LMBR1-210ENST00000434503 SOS1Q07889 1333 aaPredicted RBP28.01■■■□□ 2.07
LMBR1-210ENST00000434503 SLC39A6Q13433 755 aa28.01■■■□□ 2.07
LMBR1-210ENST00000434503 USPL1Q5W0Q7 1092 aa28.01■■■□□ 2.07
LMBR1-210ENST00000434503 MRC1P22897 1456 aa28.01■■■□□ 2.07
LMBR1-210ENST00000434503 VIRMAQ69YN4 1812 aaKnown RBP28■■■□□ 2.07
LMBR1-210ENST00000434503 CYP19A1P11511 503 aaPredicted RBP28■■■□□ 2.07
LMBR1-210ENST00000434503 CHRNA5P30532 468 aa28■■■□□ 2.07
LMBR1-210ENST00000434503 APLP1P51693 650 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms